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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A6H5KSN1_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSN1_9PHAE) HSP 1 Score: 315 bits (807), Expect = 3.420e-103 Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 1
Query: 514 MADEVDFEPEYEEEQPMDDADNGQAXXXXXXXXXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR 1089
MADEVDFEPEYEEEQPMDDADNGQA XXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGS GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLL+QDISVSWAF++GGKGAGQPRRRR
Sbjct: 1 MADEVDFEPEYEEEQPMDDADNGQAGGREGQAXXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLDQDISVSWAFVKGGKGAGQPRRRR 192
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2G621_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G621_9STRA) HSP 1 Score: 180 bits (456), Expect = 6.610e-51 Identity = 94/140 (67.14%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 670 GKGRKGGAK--GRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRR 1083
GKG+ GG K GRG +GG+ E +RY+GRGGVFESVD G GGP +SVEGWILFVRNVHEEAQEDDI+DKFSE G V+N+HVNLDRRTGFVKGY LVEFE +EEA+ AI+ ++G +LL Q ISV WAF+ G G + R+
Sbjct: 33 GKGKGGGGKQKGRGFKGGNDE--ERYDGRGGVFESVDAGGEGGPLQSVEGWILFVRNVHEEAQEDDILDKFSESGDVRNIHVNLDRRTGFVKGYALVEFESREEAENAIETLNGEELLGQTISVDWAFLDAGSGKKKGRK 170
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2DBP5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBP5_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.040e-47 Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR 1089
KGRGH G +M+ EDRY+GRGG+FESV+ GP SVEGWILF+R VHEEAQEDDI+DKF E G V+N+HVNLDRRTGFVKGY LVE+E EEA +AI+ +G +LL Q ISV WAF+ PRRRR
Sbjct: 31 KGRGHTGTAMDTEDRYDGRGGIFESVETADGVGPAESVEGWILFIRGVHEEAQEDDILDKFLECGEVRNIHVNLDRRTGFVKGYALVEYESFEEATSAIETFNGQELLGQTISVDWAFL--SDSGKHPRRRR 160
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S3GV69_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV69_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.650e-45 Identity = 81/119 (68.07%), Postives = 96/119 (80.67%), Query Frame = 1
Query: 694 KGRGHQGG-SMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAF 1047
KGRGH G + DRY GRGGVFE++ GS GP +S+EGWI+FV NVH+EAQEDDI+DKFSEYG VKN+HVNLDRRTGFVKGY LVEFE+ ++AQAAI +DG +LL+Q I V WAF
Sbjct: 39 KGRGHNSGHDGDDGDRYNGRGGVFENIQRGSGAGPLQSIEGWIVFVTNVHQEAQEDDILDKFSEYGTVKNIHVNLDRRTGFVKGYALVEFEELKDAQAAIQGLDGKKLLDQVIQVDWAF 157
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S2S198_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S198_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.990e-41 Identity = 75/123 (60.98%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGK 1062
KGRGH +M+ E+RYEGRGGVF+S+ G GP +SVEGWILFVR VHEEAQEDDI+DKF+++G V+N+ VNLDRRTGFVKGY L+E+ + +EA A++ M+G ++L Q ISV WAF+ K
Sbjct: 39 KGRGHVA-AMDAEERYEGRGGVFDSI-AGDGPGPAKSVEGWILFVRGVHEEAQEDDILDKFADFGEVRNIAVNLDRRTGFVKGYALIEYAEHDEAAKALEAMNGDEILGQTISVDWAFLESSK 159
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S0E2Z3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2Z3_9CRYP) HSP 1 Score: 150 bits (380), Expect = 5.490e-40 Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRG 1056
KGRG GS EDRY G+ G FESVD GP +SVEGWI+FV +HEEA E+DI DKFSEYG +K + + LDRRTGFVKGY LVE+EKK EAQ AI++M+G++L+EQ ++V WAF +G
Sbjct: 26 KGRGTGDGSTR-EDRYAGKSGQFESVDTEGGPGPSKSVEGWIVFVMGIHEEANEEDIYDKFSEYGEIKQMQLPLDRRTGFVKGYALVEYEKKSEAQKAIEQMNGAELMEQTLTVDWAFSKG 145
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A7S0WPK5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WPK5_9CHLO) HSP 1 Score: 150 bits (379), Expect = 1.110e-39 Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR 1089
KGRG + +M+VE R+ G+ +ES++ G+ GP +SVEGWI+ V VHEEAQEDD+ + F+EYG ++NLH+NLDRRTGFVKGY ++E+E K+EAQAAID ++G+QLL+Q ISV+WAF +G G P RR
Sbjct: 40 KGRGFKD-AMDVEQRFTGK---YESLESGTGPGPAKSVEGWIVMVTGVHEEAQEDDLHEAFAEYGEIQNLHLNLDRRTGFVKGYAMLEYESKKEAQAAIDSLNGTQLLDQTISVTWAFSKGPLKKGGPAARR 167
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: B3RRM4_TRIAD (RNA-binding protein 8A n=2 Tax=Trichoplax TaxID=10227 RepID=B3RRM4_TRIAD) HSP 1 Score: 150 bits (378), Expect = 1.550e-39 Identity = 79/133 (59.40%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGG--VFESVDVGS--VGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPR 1080
KGRG Q +D E +G +ES+DV GPQRSVEGWI+FV N+HEEAQEDD+ +KF+EYG VKNLH+NLDRRTGF+KGY LVEFE K+EAQAAID ++G+ LLEQ I V W F++G + +G R
Sbjct: 36 KGRGFQ------DDGEEAKGSNLQYESMDVDGDYATGPQRSVEGWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKVDWCFVKGPQTSGLKR 162
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A0G4H5U6_9ALVE (RRM domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H5U6_9ALVE) HSP 1 Score: 149 bits (376), Expect = 1.690e-39 Identity = 75/123 (60.98%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 694 KGRGHQGGS---MEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMR 1053
KGRG +GG M +RYEG+GGVFES+ + G +SVEGWI+ VR +HEEAQEDDI D FS YG +KNLH+NLDRRTGFVKGY L+E+E+ +EAQAAI M+G +LL Q + V WAF+R
Sbjct: 23 KGRGGRGGGDADMTDVERYEGQGGVFESLSHDASGTAAKSVEGWIVIVRGLHEEAQEDDIHDSFSGYGEIKNLHLNLDRRTGFVKGYALIEYEQFDEAQAAIHAMNGKELLSQPVHVDWAFVR 145
BLAST of mRNA_E-siliculosus-1a_F_contig1120.806.1 vs. uniprot
Match: A0A4D9AFR4_SALSN (RNA-binding protein 8A n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9AFR4_SALSN) HSP 1 Score: 151 bits (382), Expect = 4.720e-39 Identity = 89/205 (43.41%), Postives = 120/205 (58.54%), Query Frame = 1
Query: 694 KGRGHQGGSMEVEDRYEGRGGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFMRGGKGAGQPRRRR*AGRLQKE-------RIVSAST*HNGGVGVTLPGGMGRGGVFARCRGEFQETLSPPC*AGSRPGFAGRHLEAF 1287
KGRG + + DR G F+S+D GP+RS+EGWI+ V VHEEAQEDD+ + F ++G +KNLH+NLDRRTGFVKGY L+EFEK EEAQ AI EMDG++LL Q ++V WAF +G RRR L+K I++ + ++ + + G M VF RCRG+ E + P G G H++ F
Sbjct: 53 KGRGFRDEAAAEADRNARMSGPFDSLDSEGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEFEKFEEAQRAIREMDGTELLTQTMNVDWAFSKGPFRRRNVRRRDDLQSLRKTDIGNVHASIITLTYIYSKSLEFFMRGKM----VFERCRGDHLEVIVPGVQGGDSDH--GGHVKVF 251
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Start | 1 |
| Stop | 1 |
| Cds size | 1092 |
| Model size | 1442 |
| Exons | 5 |
| Ec32 ortholog | Ec-14_004800.1 |
| Ec32 ortholog description | RNA recognition motif domain |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041,ko03051 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | J |
| EggNOG OGs | KOG0130@1,KOG0130@2759 |
| EggNOG free text desc. | establishment of pole plasm mRNA localization |
| GOs | GO:0000003,GO:0000018,GO:0000184,GO:0000226,GO:0000335,GO:0000337,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0000578,GO:0000956,GO:0001709,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007173,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007294,GO:0007308,GO:0007309,GO:0007310,GO:0007314,GO:0007315,GO:0007316,GO:0007317,GO:0007350,GO:0007351,GO:0007389,GO:0008104,GO:0008150,GO:0008152,GO:0008298,GO:0008358,GO:0008380,GO:0008595,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009892,GO:0009893,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010528,GO:0010529,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019094,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030425,GO:0030706,GO:0030716,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0034655,GO:0035145,GO:0035282,GO:0036477,GO:0038127,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0044703,GO:0045165,GO:0045184,GO:0045292,GO:0045451,GO:0045595,GO:0045910,GO:0045934,GO:0045995,GO:0046483,GO:0046595,GO:0046700,GO:0046907,GO:0048024,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048599,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051052,GO:0051053,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051252,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051663,GO:0051704,GO:0051716,GO:0060255,GO:0060281,GO:0060284,GO:0060341,GO:0060810,GO:0060811,GO:0065007,GO:0070013,GO:0070727,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0120025,GO:0120038,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902875,GO:1903311,GO:1903429,GO:1904580,GO:1905879,GO:1990904,GO:2000026,GO:2000241 |
| KEGG Module | M00341,M00430 |
| KEGG Pathway | ko03013,ko03015,ko03040,ko03050,ko05169,map03013,map03015,map03040,map03050,map05169 |
| KEGG ko | ko:K03037,ko:K12876 |
| Preferred name | RBM8A |
| Seed eggNOG ortholog | 2880.D7FPG0 |
| Seed ortholog evalue | 1e-84 |
| Seed ortholog score | 320.5 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927627.173483-UTR-E-siliculosus-1a_F_contig1120:35299..35649 | 1622927627.173483-UTR-E-siliculosus-1a_F_contig1120:35299..35649 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1120 35300..35649 + |
| 1696318616.7089415-UTR-E-siliculosus-1a_F_contig1120:35299..35649 | 1696318616.7089415-UTR-E-siliculosus-1a_F_contig1120:35299..35649 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1120 35300..35649 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1120.806.1 >prot_E-siliculosus-1a_F_contig1120.806.1 ID=prot_E-siliculosus-1a_F_contig1120.806.1|Name=mRNA_E-siliculosus-1a_F_contig1120.806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=364bp
MAELARSALISALSPPSSGGERTPAQRSTCRNPPPVKYVSSGSQFETAAS VHYGVSLRPLSAWHAHSKVLSIPLSLASVGEDTTCGSCGGSWPLDGTPSL CHTCQIPKCVCPAWRAGRGSRGCCVLLHTTAETASIGSSSESNKPGTAVV PVRAAGTTTTTTTTTTTTTTNMADEVDFEPEYEEEQPMDDADNGQAGGGE GQAAGGEDDEEMVGNGGAAAAKGGKGRKGGAKGRGHQGGSMEVEDRYEGR GGVFESVDVGSVGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKN LHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLEQDISVSWAFM RGGKGAGQPRRRR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1120:26928..35649+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1120.806.1 ID=mRNA_E-siliculosus-1a_F_contig1120.806.1|Name=mRNA_E-siliculosus-1a_F_contig1120.806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1120:26928..35649+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGGCAGAACTAGCCCGATCCGCTCTGATCTCCGCGCTCTCTCCTCCCAG
CAGCGGCGGAGAGCGAACACCTGCACAGCGGTCCACCTGTCGTAACCCCC
CGCCCGTAAAATATGTATCCTCTGGATCTCAATTCGAGACGGCTGCTTCT
GTCCACTACGGAGTCTCCCTTCGCCCTCTTTCTGCCTGGCACGCACACAG
CAAAGTGCTTTCTATCCCTCTCTCCCTCGCTTCGGTTGGTGAGGACACCA
CGTGCGGCAGCTGTGGCGGGTCGTGGCCCTTGGACGGGACCCCCTCTTTG
TGCCATACCTGCCAAATTCCCAAGTGTGTGTGCCCCGCTTGGCGCGCGGG
GCGCGGGAGCAGAGGCTGCTGTGTGCTGCTTCACACCACCGCTGAGACCG
CGAGCATTGGATCGTCGAGTGAATCGAACAAACCAGGTGCATAGTGCGGT
TTCTCTTTGAAGTGTTGGCGTTGGGGTGTGGATCGTCCCACTGGCGCTTG
GGGGATCGGGAACAGAGGACGGGGAAGTGAATGGAAGGGGGGAACGGGGG
GGCAAGAGAGGGAAGAGAGAAAGAGAGAGGGAGAGAGAGACAAAGAAAGG
AAGAAGGAAAGGATCGCGCGTGCGCGAGCTTGGCGCCGTGGCGAGCGGAG
GCTACATTGCCCCCTCGCCGGTTTGCTCTTGCTCGATTGATATCATAAAA
AGCTGCGGAGGGAGACGATCTGTCGAGGCGTTGGTCGATTTGGACAAAAG
CAGCGAAGAGAGGTAGGTGCGGAGTAGAGGATACAACAACCAGCAGCAGC
TGATCCGCGGTATCCATTCTCATGACCATTTTGGGAGAATCTGTGTGTTC
TGAGGTGGAAGGTCGGAGGAAAGGAAGACCAACCAGAGTGAGAACAGCAA
CATCAGCTGAGCAACGGAAGCCCGTGATGTTGTGCGCGCGTCGTGTGCAC
TATCTCTCTCTTTTTACTCTCTTTTCTCAAAACCGGTGCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCGTGNNNNNNNAGGG
AAGCCCCGGGGGTGGTGGGCGGCGCCTTTGCCCCCCCCCCCTCTTTTTCC
TTTTTTTTCCCAACACCCGGCCCCCCCCCCCCCCCCCCCCCCCCATTCCC
CACCTACGGAGAGACGCCCAACATTTCCCCAACACAATCTTGTCGCTTGT
CGCCGTTGGCTTCGGGTAGACCATCAGTGCACGGCTGTTGGGCATGGAGG
ACACTGTGGTGTGCATGCGCCGAGGATTGATGCTGTCGGCACACTCGCTA
AGTTGAATATCGACAAACAATTTGGAGTGTAAAAATGGTGGTATGTGTTA
GCCCTTCAAAAGGCGCACAAAGTCGTAAATCCATGAAATCTTTCCAGCAG
TCGTTTTGCTTTTACTACCTACTACAATGTTATGGTAGCTACGCGAGTGG
TATGCATATGACAGCTGTTTGACAATGTGAGGTCGTGCAAACGCTGCAAC
GCAGCTGCTCCTCAGCCTCAGCAAGACCTAAACGATGCCATGCGGTTCAG
TTAGTGTCAAGTATTACGGAGCCCTATGGAGCCCTAACGGAGAGTGGAGA
GGGTACGGCGGTACGTGCGTGGTATGACCACAAGCCGTGTACATTCCATC
GTTCACGAAGTAGCCCAGTCGGCGTCACTGCACTAGTTCGTGAAACCCAC
CTCTCCCGATGCAGTTTGCATGAAAACACACCGCACGCTGATTCCCCGGC
ATCTCGGGAGTCCGCAGCTCGGCAAAACGTGATCTCTTCGAAAACTCGAA
AGATATCCTACGCTCGCCAGGTTTGACTTTTGAATTTTTTCACGCCCAAG
ATGTGAACCCCGCACGATAAACAAGAAAAAAGTTGTACTGAGAGCAACTA
TAAGCCAACATGAGAACATGAAAATGATACAAGGCAGAAGGAGTAAGCTA
CGTGGAGGGTGCGGATGCCTTCCGCTTCCCCTTCCCAGCGGAGGAACACG
CGGAGGACCGGCGCTCGGTGCATTCCTCCTCGTCGTCATCGTCGACCAGC
GTGCCGCAGTTTCGGTGAAGGTGTCCGTCGCAGGAGGTGCACGTGAGCAA
TGGCGATGTTGCCCTCCCTCGTCCATCCCGCGTCGATGCACTTGGGGCTG
ACGATGAGAGGGAGGTCGTCTCGGGGGAGTTGTCGGAAGATGTGCGAACG
AGAGCCGATAGGCGCTCCCTCACGGCGAGGGCAGACGGAATGGGGCAACC
GGGCGGGGGGCCGTCCTCTCGGTCGATGCCGACATCGACCGGGAAGCGAT
CTCTTGAGGTCAGGCTCGTCGCACAAGGCAGCGATCTCTCGAGCGGTGCG
TTCCCTGGCAAGATTCATACCCCCCTGAACCCGGAGACGGTCGTGTGAGC
ACACCTTGGCCTCGTCGATCACGAGATTGATGATATATTTGCAAACCTCC
CTCTCATCGTCAGCCCCAAGTGCGTCGACGCGGGATGGACGAGGGAGGGC
AACATCGCCATTGCTCACGTGCACCTCCTGCGACGGACACCTTCACCGAA
ACTGCGGCACGCTGGTCGACGATGACGAAGACGACGACGACATCGAGAGG
AATGCACCGAGCGCCGGAGCGTGTTCCTCCGCCGGGAAGGGGAAGCGGAA
GGCATCCTCACTCCTCCACGTAGCTTACTCCTTCTGCCTTGAATCATTTT
CATGTTTTCTTGTTGGCTTATAGTTGCTCTCAGTACAACTTTTTTCTTGT
TTATCGTGCGGGGTTCACATGGTCCATGGTGGTCCGTTGTTGTTCGTCGA
GGGTCTATGCTGCGTTCAAGGGAGTGCCTTGTGCACCGCTATGTACGGCG
AACAATGTGTTGCGCTTTCTTAGTTAATCTAAGTAGGGCGTCCAATTTCA
CCTCTTGTTGAGTACCTCTCAGAACAAGAAGGTCTTTGGAGCATCGTCCC
GGGTTTGTTTACATCGTCCATGCTCGTCCTTTTCTCGTCCACGGTCCATG
CTGCTTTTTCAAACGGGGTGTGTTGTGCACCATAACGCACGGCGACCGGG
AATACTAATAATTATTGGAGTGAAAACTATTTGTTTCTTGTTTTTGGTTT
GTGGGAGACGATATACGGAGAGAGTTTTATTCTATCCCATCCATCCGCAC
GCAGGCAGCCACGATCACTCCCAGATTTTTTCGTCTGAAAAAGAAGAAAA
GTCCCGGCCTAGGTTTGAACTCGTGTCGCCACATTCCAAATCTACGTTTT
ACCACTAGACAACAAATGACCAAAAATGCCCGACAGTTCGTGTGTTGCAC
AATTTCGAATAACTGAAATGAATGGCGATCAGCATTCCTTAGCATGCCTT
AGGCACGCTCGTAGTCGCGTGGGTTCGTGCCAAAAACTGGAAGAAAACGA
AATAAAATTGTCTTCATCGTTAGAAACGCACGTTTTTACGCGTAAGAAAG
ATGTAGGAAGTACCTGGTAGTATATTGACTTGGATTTGTATGGATTAATT
ATGTTTTTGGCAGACGACATTCAAACTATGTTAACTGAGTGCACCCCCCC
CCCCCCCATCGTCTACCCGCTTCTTCCGTCTCCCATCTAAGGTACAGCAG
TGGTGCCTGTGAGAGCAGCAGGGACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAAACATGGCGGACGAGGTCGATTTCGAGCCAGAGTA
CGAAGAGGAGCAACCCATGGATGACGCGGACAACGGGCAGGCGGGAGGGG
GAGAGGGGCAGGCGGCGGGAGGGGAAGACGACGAGGAGATGGTGGGGAAC
GGGGGCGCAGCGGCCGCAAAAGGCGGCAAGGGCAGGAAAGGCGGCGCCAA
GGGGAGGGGGCACCAGGGGGGTTCGATGGAGGTGGAAGACAGGTACGTAC
GCCCACGACAATTGTTCACAACCAGTCCCTTTTGTTCGTCGTCGACCTCA
ACGAGACAGAGGGCGCCGCCGCTGCGGCCACCGCGACCGACCGACCGAAC
GAACAAACGGCTCTGTGACGAACAACTCGTGTGAATACTAGCAGAGATTA
TCATGCTGGAGCTCCGAAACATAGTCTGGGAAAAATATCTCCATTTTGGC
GCAGACAGTAGCGGTGAAAAGCGGCGGTGCCTTCGTCGGCTACATGATTT
TGTCGGGACAGGCCTGTCTCACACACCGACGTGTTCTCGACGAGTCCCCC
CCTGTGTGCATCCTCTTCGAGTTGTCATCTTTAAAACTGCACCCGCTACG
CGGGTAGTCCAGGTTGGGATGGGGCAGGTGCCCTAGGTGTATCGGAAAGT
TTTGGTCGAAGAAAAACGCTGCAAGGTTCAACGGTAGTAGCAGTGAAATG
GCTCGACGGATTGTTTTGACGATTTCGGATTGCAACGCCACCCGGTGACC
CTCCTGCAGGGCTATATCTAGTTTGGGGCTGTCGTGATTGGTGTATATTG
CAAAGATCGGCCGGGCCTTGACTGCGCTCACCAGCTGGCAAATGGACCGT
TTCTCCAGCCTGAATGCGGGCCAAATAGCACAAGAATCCCTCCTAGTGCG
CCGGGTCCCCCAACATGTGTGTGTTTTTATTATTAGCATCGACCGCGCTA
ACCTGCTGACCAATGAAAATACGTCAGTCTCAGTGCGGTGGAAAACACGA
AACACTGTGTGTGTATGTAGAAGGTTGGCATTACCCCCGACCTGCGTGCA
TGCACGTACGCCAAGTCTTTGATCTCCAATGCCGTAGCTACGTGTCTCGA
CACCACTCTCATGTCGTAGCTTCGTGTCTCCCTTCGGAAGGATTGAACAC
CACGGGCAGGTCCCCCCGTCCGGTGTGTCTGGGTTGTACGTGCCGTAAGC
GCTGTCCCGGCGAAGAATCGCCCACAGAACGAGATAATTGACGGCGGCTT
GACTCGAGAGAGGGGGGTCAACAACGCCAGACACAGCAGTCGCCTCTTGC
CCAGCAGTAGAGCGGTCAAACTGGCTTGGCGCGGTGTTGTTGCACAAGGT
TGGGCCTTTTTTTTTATTGGTGGAATCGCGCTTCGCTATCATGGCGGGGC
GAAGAATACCATTTTTTTTTTTTTTTTACCCCTCCTCTGAAACGTATGGT
GTGGCGCCGCTTTTTCTCCACAGAACGCAAACCTGTAAACCTGTTGTGCC
TTCTCCGCAAACGCGATACCTTTACCTTGTACTTACATGCAACAAACACC
GTCCGAACAAGCCCAAAAGAAGGGGCTTCTACTCGTTACACGTGCGTGAC
GTGCACCAGTTCAAGAGTACTAAACCTCAAGGTCCTGTTCCGACACTCAG
ACTGGCTGCAGACATGCACGTCCCTTGGTCTTGACTACATGGGTCGGTAG
CAACATGCCCTCGGAGCGATGAGTTGCACACCTACCCAATCGGAGTAGAT
TCTTGAGCCCCGTAATAATTAAAAATCTCGTTACCAGTATCAAATTTCAC
CACATGGCCATGTGTGTTTCATGGGCTCTTCTTGCTGTCTCTCGCGGCGA
CAAAGATACGAGGGTCGAGGAGGCGTTTTCGAGTCCGTGGACGTTGGCTC
CGTTGGCGGCCCACAGCGCAGCGTCGAGGGCTGGATCCTGTTCGTGCGCA
ACGTGCACGAGGAGGCTCAGGAGGACGACATCATGGACAAGTTCTCCGAG
TACGGGGCGGTGAAGAACCTGCACGTCAACCTCGACAGGCGCACGGGTTT
CGTCAAGGTGCGGGTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGGTCGTG
ATGGTGGTGGTGGTGGTGGTGGTTGCTGTTGTTGTTGTCGTTGGTGGTGG
CGGTGGCGGTAGTGATGTCTGTTGTTCTTGTTCTTGTTGGAGGTGGTCGT
GATGGTGGTGGTGGTGGTGGTGGTGGTTGCTGTTGTTGTTGTCGTTGGTG
GTGGCGGTGGTGCTGTTGTTAGAGTATTGTTGTATGTGTTGTCGGTGTCG
TCGCGTGGGTGGTGATGGATGTTGATTCTTGTTGTTGTTGTCGTTGTTGT
TGTTGCTTGTTGTGGTTGGTGGTGGTGGTGGTGTTGTCGTTGTCGGCGCT
TAGGTAGTGGTGGGTGTTGATTCTAAGCACGGGTACCGCCCGTGATCCAA
AGGTCGGCCTGTGTGCGCGGGAGTGTGTGCAGAGGTGCAATCTGACATGT
TCCAGGTGCGGAGGTACACAGCGACCTATGGGGTGTAATTGTTGTCTGTG
GGTGTGGGTGACAAACACTGCTGTTTCTGAATGGCCGCACAACACAAAAG
ACCGAAACAAGAAACGAACCAAGAGCAAAAGTAGGAGACAGAGATCCACC
AGCGGGATGCTTTGAGCCGTCACCCCATTTTCCCGTTCCTCCACGCAGGG
TTGAAAGAAATTTCGCATCTAGCTTTTTGCCGACCCGTAACACAATGAAT
GGTAGGGGTTCGAGAAAATCCGTTCGATCTCCCTGATGCCTCTCCCCGGC
CATGCGTCCGTAGATTGCGGTGCAAAAAGAAGCGATCAACACCGATGACT
TCAACGAAGGAAATGGTCTTTTCCCACTTGGTTGCGAAACAAGTGGCGAC
ACCCTGTCCAAGCCTTGGGCGGGTGCTGTCGGTCGGGTGCCACCGCTCAC
GCTTAAGCCTTAGTCAGGCTGTCGCCACGTGTTTCGCGACCAAGTGGGAA
AGACGCTTCTTTGCGCGGCAATACACTGATAACCAGGGCCGGTGGGGGGG
AGGGGGGCATCAGGGAGATCGAACGGTGGTCTCCAACCCCACCGACGGTA
GTCTCGAACCCCACCGTTCATTGCGTTAGGGTTGGCGATCGCTCGATATG
AAGGACCAACTCACGGGAGAAAGAACGGGGAAATGGGGTGACGGCTCAAA
GCATCCCGCTTGTCGCCTTAAATCGCGTTCTCCACTTCTTCTCTTGATTA
CCATGGTATATTTCTTTTCTGGTCGTTGTGTGCCGTGCTTCCAACTACAT
CTACAGCAGTAATAACGCGTATCGTTCACACCCATAAAACAATACAGCAG
TGGTGGGGCTCTCAATAACTAATGCCAGTATGTGCCCGGCGAATCGACAG
GCGCCATTGAGACGAACCGGCGCTATTCAATTTACAGATTGGCTTGGTCA
TTCAGTCTGTGTCCAGCAATTTCGCCTGCGCTTTGTATACAGGGCCACCG
GGATTTATTTATCCGGCGTTGTTGACGCCCTCCCACTGTACTCAGAGCAA
TCGCTCGGCCTCGCTTTGTACTAACTATTCTTGCGGCTGTGCGCGCGCTA
TACCGCGCTTTTGCTGCGTCGTCCTGTCGTTGCGCTGTGATGTGCAGGGG
TATTGTTTGGTCGAGTTTGAGAAAAAGGAGGAGGCGCAGGCGGCAATCGA
CGAGATGGACGGTTCACAGCTCCTGGAGCAAGACATCTCCGTCAGTTGGG
CCTTCATGAGGGGTGCGTTGTTGCGGTGTTGTTTTGGAGAATATTCATAC
AAACACACCTGCAGATTCTACCCGTCCAAGTTGTAACGGCAACGGGAACG
GCGCCAATGTGCTGCGGTCCTCGGAACGTGCGAAAACACATTCGCCAGCG
CTGAGACTGCTGCTATGTGATCCTGCATGCGTGTTGTCTGTTTACTTTCA
CACACAACCTGATCGTTTGGCTCCGGTGTGCTGGCCACCGCCGTCCTTTC
TTAACTATTTTGACAGATTTTTGAGTAAGCACTGAACGCGTGGCCAATTG
GGGAAGAGCGTTGCTTTTTTCCCCCATTGCACAAGAGTCACGCGTGTGCC
CACTTTGCGTACTCTCTATTTTTGATCTTGCTCTCTTTGAACGCTATGTA
GGTAGGGAGGCCCAGTACCCCCCCCCTTTACTGAAATTTTTCCGCTATTC
AACAAGTCTAGCCCTAAAAATGACCGTTTTTCATTCCGTGATCGCGTGGA
ACTATCTCGAGTATTTGGGTGGCACATGCGCTCGCGTATTCGTGCTTATG
AAGTTGGCGAGCACCGAGCGCGCTAGCGGGCTGACCAATGAAATAATGCC
AGTGTCAGAGCGGGAAAATAACGCCAACATGCTCTCTATGCCCGACGGGG
GGGGAGGGAGGCGCGGAGGAGATTGGACGACAGGGCCTAGTCTCCGGATT
TAGCGTACCTGCAGAAATGGACAACACCCAACACCATTTCACGTAGCATT
CCTGGTGCCTGCTCCTGTGCTAGCATGAAGTCCCTGCAGTGGGACACTCT
TGCGCCAAACATCCCTTGACTCCATTGGGCTCGTCACCAGTTTACGACGG
CTGCGTGTGTTTTTGTTTGCTTCGGACCGTGCAGGAGGAAAGGGGGCAGG
GCAGCCCAGGAGGCGACGGTAGGCAGGCAGGCTTCAAAAAGAACGGATCG
TCTCCGCTAGTACATAGCATAACGGCGGGGTGGGGGTTACGCTCCCTGGA
GGAATGGGACGGGGGGGTGTATTCGCACGTTGCCGAGGTGAATTTCAAGA
GACCCTTTCGCCTCCCTGCTAGGCCGGGTCACGTCCAGGTTTCGCAGGCA
GGCACCTTGAGGCGTTCGCTGATTACTGATCACGCAGCGCTTAGTGGTGG
GGTCGCGCAGCGTGGAGAAGGCGGCCTCACGGTCTTGCCCTGTGGGTGCC
CATAATATCTTCGTGACTCAACAAAATCAGAAAATAAAAAATTTTGCGTT
TTGTCGGTCTTTTGGGTGGGGG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1120:26928..35649+ >mRNA_E-siliculosus-1a_F_contig1120.806.1 ID=mRNA_E-siliculosus-1a_F_contig1120.806.1|Name=mRNA_E-siliculosus-1a_F_contig1120.806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2184bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1120:26928..35649+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGGCAGAACTAGCCCGATCCGCTCTGATCTCCGCGCTCTCTCCTCCCAG CAGCGGCGGAGAGCGAACACCTGCACAGCGGTCCACCTGTCGTAACCCCC CGCCCGTAAAATATGTATCCTCTGGATCTCAATTCGAGACGGCTGCTTCT GTCCACTACGGAGTCTCCCTTCGCCCTCTTTCTGCCTGGCACGCACACAG CAAAGTGCTTTCTATCCCTCTCTCCCTCGCTTCGGTTGGTGAGGACACCA CGTGCGGCAGCTGTGGCGGGTCGTGGCCCTTGGACGGGACCCCCTCTTTG TGCCATACCTGCCAAATTCCCAAGTGTGTGTGCCCCGCTTGGCGCGCGGG GCGCGGGAGCAGAGGCTGCTGTGTGCTGCTTCACACCACCGCTGAGACCG CGAGCATTGGATCGTCGAGTGAATCGAACAAACCAGATGGCAGAACTAGC CCGATCCGCTCTGATCTCCGCGCTCTCTCCTCCCAGCAGCGGCGGAGAGC GAACACCTGCACAGCGGTCCACCTGTCGTAACCCCCCGCCCGTAAAATAT GTATCCTCTGGATCTCAATTCGAGACGGCTGCTTCTGTCCACTACGGAGT CTCCCTTCGCCCTCTTTCTGCCTGGCACGCACACAGCAAAGTGCTTTCTA TCCCTCTCTCCCTCGCTTCGGTTGGTGAGGACACCACGTGCGGCAGCTGT GGCGGGTCGTGGCCCTTGGACGGGACCCCCTCTTTGTGCCATACCTGCCA AATTCCCAAGTGTGTGTGCCCCGCTTGGCGCGCGGGGCGCGGGAGCAGAG GCTGCTGTGTGCTGCTTCACACCACCGCTGAGACCGCGAGCATTGGATCG TCGAGTGAATCGAACAAACCAGGTACAGCAGTGGTGCCTGTGAGAGCAGC AGGGACAACAACAACAACAACAACAACAACAACAACAACAACAACAAACA TGGCGGACGAGGTCGATTTCGAGCCAGAGTACGAAGAGGAGCAACCCATG GATGACGCGGACAACGGGCAGGCGGGAGGGGGAGAGGGGCAGGCGGCGGG AGGGGAAGACGACGAGGAGATGGTGGGGAACGGGGGCGCAGCGGCCGCAA AAGGCGGCAAGGGCAGGAAAGGCGGCGCCAAGGGGAGGGGGCACCAGGGG GGTTCGATGGAGGTGGAAGACAGGTACAGCAGTGGTGCCTGTGAGAGCAG CAGGGACAACAACAACAACAACAACAACAACAACAACAACAACAACAAAC ATGGCGGACGAGGTCGATTTCGAGCCAGAGTACGAAGAGGAGCAACCCAT GGATGACGCGGACAACGGGCAGGCGGGAGGGGGAGAGGGGCAGGCGGCGG GAGGGGAAGACGACGAGGAGATGGTGGGGAACGGGGGCGCAGCGGCCGCA AAAGGCGGCAAGGGCAGGAAAGGCGGCGCCAAGGGGAGGGGGCACCAGGG GGGTTCGATGGAGGTGGAAGACAGATACGAGGGTCGAGGAGGCGTTTTCG AGTCCGTGGACGTTGGCTCCGTTGGCGGCCCACAGCGCAGCGTCGAGGGC TGGATCCTGTTCGTGCGCAACGTGCACGAGGAGGCTCAGGAGGACGACAT CATGGACAAGTTCTCCGAGTACGGGGCGGTGAAGAACCTGCACGTCAACC TCGACAGGCGCACGGGTTTCGTCAAGATACGAGGGTCGAGGAGGCGTTTT CGAGTCCGTGGACGTTGGCTCCGTTGGCGGCCCACAGCGCAGCGTCGAGG GCTGGATCCTGTTCGTGCGCAACGTGCACGAGGAGGCTCAGGAGGACGAC ATCATGGACAAGTTCTCCGAGTACGGGGCGGTGAAGAACCTGCACGTCAA CCTCGACAGGCGCACGGGTTTCGTCAAGGGGTATTGTTTGGTCGAGTTTG AGAAAAAGGAGGAGGCGCAGGCGGCAATCGACGAGATGGACGGTTCACAG CTCCTGGAGCAAGACATCTCCGTCAGTTGGGCCTTCATGAGGGGGGTATT GTTTGGTCGAGTTTGAGAAAAAGGAGGAGGCGCAGGCGGCAATCGACGAG ATGGACGGTTCACAGCTCCTGGAGCAAGACATCTCCGTCAGTTGGGCCTT CATGAGGGGAGGAAAGGGGGCAGGGCAGCCCAGGAGGCGACGGTAGGAGG AAAGGGGGCAGGGCAGCCCAGGAGGCGACGGTAG back to top
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