prot_E-siliculosus-1a_F_contig112.796.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig112.796.1
Unique Nameprot_E-siliculosus-1a_F_contig112.796.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length186
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: D8LMD4_ECTSI (DWNN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD4_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.010e-27
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57
            MAS+V+FKFKSAR+YDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE
Sbjct:    1 MASMVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A6H5LL05_9PHAE (DWNN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL05_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.060e-27
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57
            MASIV+FKFKSAR+YDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE
Sbjct:    1 MASIVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.420e-26
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0
Query:    1 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAH-KSGGLLSKIKALDAAAA 97
            MAS V +KFKSA+D+D+V+F G  I L DLKRAIVEQK LH+GM+FDL IVND+T+EEY +D   + KNTSV VKRVPA  K GGLL+KIK    A+A
Sbjct:    1 MASTVHYKFKSAKDFDAVAFSGMVISLFDLKRAIVEQKNLHKGMDFDLAIVNDQTKEEYTDDTQAIPKNTSVVVKRVPAKSKGGGLLAKIKQAARASA 98          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A024GLF0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLF0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.970e-21
Identity = 51/98 (52.04%), Postives = 81/98 (82.65%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPA-HKSGGLLSKIKALDAAAALRAT 101
            + FKFKSA+D+D+V+FPGT I+++DLK+AIVE+KKL++G++FDL I + ++ + Y+++N+ + +NTSVTVKR+P+ H   GLL+++KA   AAA +AT
Sbjct:    3 IHFKFKSAKDFDTVNFPGTVIRVIDLKKAIVEKKKLNKGLDFDLVITDAQSGKVYEDENLQLARNTSVTVKRIPSMHPGSGLLARMKA--EAAAAKAT 98          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: F0WXU8_9STRA (Uncharacterized protein AlNc14C364G11035 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WXU8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.080e-20
Identity = 51/98 (52.04%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPA-HKSGGLLSKIKALDAAAALRAT 101
            + FKFKSA+D+D+V+FPGT I+++DLK+AIVE+KKL++G++FDL I + +  + Y ++N+ + +NTSVTVKR+P+ H   GLL+++KA   AAA++AT
Sbjct:    3 IHFKFKSAKDFDTVNFPGTVIRVIDLKKAIVEKKKLNKGLDFDLVITDAQNGKVYDDENLQLARNTSVTVKRIPSLHPGSGLLARMKA--EAAAVKAT 98          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A2D4BW50_PYTIN (DWNN domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW50_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 1.090e-20
Identity = 46/94 (48.94%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHK-SGGLLSKIKALDAAAA 97
            + FKFK+A+++D+V+FPGT I+++DLK+A V++KKL +G++FDL I + +  + Y ++N+ + +NTSVTVKR+P+ +  GGLL+++KA  AAAA
Sbjct:    3 IHFKFKAAKEFDTVTFPGTVIRVIDLKKAXVDKKKLXKGLDFDLVITDAQNGKVYDDENMQLPRNTSVTVKRIPSQQPGGGLLARMKAEAAAAA 96          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD)

HSP 1 Score: 93.6 bits (231), Expect = 7.410e-19
Identity = 45/88 (51.14%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSG-GLLSKIKA 91
            + FKFKSA+++D+V+FPGT I++LDLK+AI+E+KKL++G++FDL I + +  + Y ++N+ + +NTSVTVKR+P+ + G GLL+++KA
Sbjct:    3 IHFKFKSAKEFDTVTFPGTVIRVLDLKKAIIEKKKLNKGLDFDLVITDAQNGKVYDDENMQLPRNTSVTVKRIPSQQPGSGLLARMKA 90          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A5D6Y1K7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1K7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 7.970e-19
Identity = 48/97 (49.48%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSG-GLLSKIKALDAAAALRA 100
            + FKFKSA+++D+V+F GT I++LDLK+AI+E+KKL++G++FDL I + ++ + Y ++N+ + +NTSVTVKR+P+ + G GLL+++KA   AAA  A
Sbjct:    3 IHFKFKSAKEFDTVAFAGTVIRVLDLKKAIIEKKKLNKGLDFDLVITDAQSGKVYDDENMQLPRNTSVTVKRIPSQQPGSGLLARMKAEAMAAAAAA 99          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A7S0ZB63_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB63_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 1.890e-18
Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    1 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSGGLLSK 88
            MA+ V FKFKSA+DYD+V+F G  +K+ DLK AIVEQKKL  G +FDL I + +T +EY  ++ +V +N SV V+RVP  + GG+LS+
Sbjct:    1 MAAAVHFKFKSAKDYDTVTFDGEYLKVADLKVAIVEQKKLSFGEDFDLQIQDAQTGDEYVNESDLVRRNASVIVRRVPGLRPGGILSQ 88          
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: T0S7L1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7L1_SAPDV)

HSP 1 Score: 92.0 bits (227), Expect = 2.460e-18
Identity = 45/87 (51.72%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    5 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSGGLLSKIKA 91
            V FKFKS +++ +V+FPGT I+++DLK+AI+EQKKL++G++ +L I +      Y++DN  + KNTSV VKRVPA  + GLL++IKA
Sbjct:    3 VHFKFKSEKEFGTVNFPGTAIRVIDLKKAIIEQKKLNKGLDLELVITDASNNTVYEDDNQQLPKNTSVIVKRVPAKNNNGLLARIKA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD4_ECTSI1.010e-2794.74DWNN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LL05_9PHAE1.060e-2796.49DWNN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CNQ4_9STRA1.420e-2664.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024GLF0_9STRA7.970e-2152.04Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WXU8_9STRA1.080e-2052.04Uncharacterized protein AlNc14C364G11035 n=1 Tax=A... [more]
A0A2D4BW50_PYTIN1.090e-2048.94DWNN domain-containing protein n=1 Tax=Pythium ins... [more]
K3X144_GLOUD7.410e-1951.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y1K7_9STRA7.970e-1949.48Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S0ZB63_9RHOD1.890e-1853.41Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
T0S7L1_SAPDV2.460e-1851.72Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..185
NoneNo IPR availableGENE3D3.10.20.90coord: 1..82
e-value: 5.1E-29
score: 101.9
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 1..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..154
IPR014891DWNN domainSMARTSM01180DWNN_2coord: 5..78
e-value: 6.1E-33
score: 125.4
IPR014891DWNN domainPFAMPF08783DWNNcoord: 5..78
e-value: 6.8E-28
score: 96.8
IPR014891DWNN domainPROSITEPS51282DWNNcoord: 5..78
score: 26.699
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig112contigE-siliculosus-1a_F_contig112:3868..5669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig112.796.1mRNA_E-siliculosus-1a_F_contig112.796.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig112 3182..7095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig112.796.1 ID=prot_E-siliculosus-1a_F_contig112.796.1|Name=mRNA_E-siliculosus-1a_F_contig112.796.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp
MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNI
VNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSGGLLSKIKALDAAAALRA
TATATTTTSTKYGSLLDAKRSCQYRLRNLDSLTCYCSFSSFFHNVFVFVG
SSLFRRSAEVRVVVFVVVCRFDWLKRFLLLRFYKS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033489RBBP6
IPR014891DWNN_domain