mRNA_E-siliculosus-1a_F_contig112.796.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: D8LMD4_ECTSI (DWNN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD4_ECTSI) HSP 1 Score: 108 bits (270), Expect = 6.340e-25 Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 3
Query: 600 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 770
MAS+V+FKFKSAR+YDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE
Sbjct: 1 MASMVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A6H5LL05_9PHAE (DWNN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL05_9PHAE) HSP 1 Score: 109 bits (273), Expect = 7.480e-25 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3
Query: 600 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 770
MASIV+FKFKSAR+YDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE
Sbjct: 1 MASIVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.850e-23 Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 3
Query: 600 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAH-KSGGLLSKIKALDAAAA 890
MAS V +KFKSA+D+D+V+F G I L DLKRAIVEQK LH+GM+FDL IVND+T+EEY +D + KNTSV VKRVPA K GGLL+KIK A+A
Sbjct: 1 MASTVHYKFKSAKDFDAVAFSGMVISLFDLKRAIVEQKNLHKGMDFDLAIVNDQTKEEYTDDTQAIPKNTSVVVKRVPAKSKGGGLLAKIKQAARASA 98
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A2D4BW50_PYTIN (DWNN domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW50_PYTIN) HSP 1 Score: 92.4 bits (228), Expect = 1.710e-18 Identity = 46/94 (48.94%), Postives = 76/94 (80.85%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHK-SGGLLSKIKALDAAAA 890
+ FKFK+A+++D+V+FPGT I+++DLK+A V++KKL +G++FDL I + + + Y ++N+ + +NTSVTVKR+P+ + GGLL+++KA AAAA
Sbjct: 3 IHFKFKAAKEFDTVTFPGTVIRVIDLKKAXVDKKKLXKGLDFDLVITDAQNGKVYDDENMQLPRNTSVTVKRIPSQQPGGGLLARMKAEAAAAA 96
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A024GLF0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLF0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 7.340e-18 Identity = 51/98 (52.04%), Postives = 81/98 (82.65%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPA-HKSGGLLSKIKALDAAAALRAT 902
+ FKFKSA+D+D+V+FPGT I+++DLK+AIVE+KKL++G++FDL I + ++ + Y+++N+ + +NTSVTVKR+P+ H GLL+++KA AAA +AT
Sbjct: 3 IHFKFKSAKDFDTVNFPGTVIRVIDLKKAIVEKKKLNKGLDFDLVITDAQSGKVYEDENLQLARNTSVTVKRIPSMHPGSGLLARMKA--EAAAAKAT 98
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: F0WXU8_9STRA (Uncharacterized protein AlNc14C364G11035 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WXU8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 9.680e-18 Identity = 51/98 (52.04%), Postives = 80/98 (81.63%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPA-HKSGGLLSKIKALDAAAALRAT 902
+ FKFKSA+D+D+V+FPGT I+++DLK+AIVE+KKL++G++FDL I + + + Y ++N+ + +NTSVTVKR+P+ H GLL+++KA AAA++AT
Sbjct: 3 IHFKFKSAKDFDTVNFPGTVIRVIDLKKAIVEKKKLNKGLDFDLVITDAQNGKVYDDENLQLARNTSVTVKRIPSLHPGSGLLARMKA--EAAAVKAT 98
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A7S0ZB63_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB63_9RHOD) HSP 1 Score: 87.8 bits (216), Expect = 2.080e-16 Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 3
Query: 600 MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSGGLLSK 863
MA+ V FKFKSA+DYD+V+F G +K+ DLK AIVEQKKL G +FDL I + +T +EY ++ +V +N SV V+RVP + GG+LS+
Sbjct: 1 MAAAVHFKFKSAKDYDTVTFDGEYLKVADLKVAIVEQKKLSFGEDFDLQIQDAQTGDEYVNESDLVRRNASVIVRRVPGLRPGGILSQ 88
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD) HSP 1 Score: 93.6 bits (231), Expect = 3.190e-16 Identity = 45/88 (51.14%), Postives = 74/88 (84.09%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSG-GLLSKIKA 872
+ FKFKSA+++D+V+FPGT I++LDLK+AI+E+KKL++G++FDL I + + + Y ++N+ + +NTSVTVKR+P+ + G GLL+++KA
Sbjct: 3 IHFKFKSAKEFDTVTFPGTVIRVLDLKKAIIEKKKLNKGLDFDLVITDAQNGKVYDDENMQLPRNTSVTVKRIPSQQPGSGLLARMKA 90
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: A0A5D6Y1K7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1K7_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.470e-16 Identity = 48/97 (49.48%), Postives = 78/97 (80.41%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSG-GLLSKIKALDAAAALRA 899
+ FKFKSA+++D+V+F GT I++LDLK+AI+E+KKL++G++FDL I + ++ + Y ++N+ + +NTSVTVKR+P+ + G GLL+++KA AAA A
Sbjct: 3 IHFKFKSAKEFDTVAFAGTVIRVLDLKKAIIEKKKLNKGLDFDLVITDAQSGKVYDDENMQLPRNTSVTVKRIPSQQPGSGLLARMKAEAMAAAAAA 99
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Match: T0S7L1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7L1_SAPDV) HSP 1 Score: 92.0 bits (227), Expect = 8.470e-16 Identity = 45/87 (51.72%), Postives = 67/87 (77.01%), Query Frame = 3
Query: 612 VRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTREEYKEDNVVVTKNTSVTVKRVPAHKSGGLLSKIKA 872
V FKFKS +++ +V+FPGT I+++DLK+AI+EQKKL++G++ +L I + Y++DN + KNTSV VKRVPA + GLL++IKA
Sbjct: 3 VHFKFKSEKEFGTVNFPGTAIRVIDLKKAIIEQKKLNKGLDLELVITDASNNTVYEDDNQQLPKNTSVIVKRVPAKNNNGLLARIKA 89 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig112.796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig112.796.1 >prot_E-siliculosus-1a_F_contig112.796.1 ID=prot_E-siliculosus-1a_F_contig112.796.1|Name=mRNA_E-siliculosus-1a_F_contig112.796.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp MASIVRFKFKSARDYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIback to top mRNA from alignment at E-siliculosus-1a_F_contig112:3182..7095- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig112.796.1 ID=mRNA_E-siliculosus-1a_F_contig112.796.1|Name=mRNA_E-siliculosus-1a_F_contig112.796.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3914bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig112:3182..7095- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig112:3182..7095- >mRNA_E-siliculosus-1a_F_contig112.796.1 ID=mRNA_E-siliculosus-1a_F_contig112.796.1|Name=mRNA_E-siliculosus-1a_F_contig112.796.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1116bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig112:3182..7095- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |