prot_E-siliculosus-1a_F_contig1118.791.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1118.791.1
Unique Nameprot_E-siliculosus-1a_F_contig1118.791.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length241
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: D7G0I5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I5_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 5.530e-148
Identity = 236/240 (98.33%), Postives = 237/240 (98.75%), Query Frame = 0
Query:    1 MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYDDFM 240
            MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHM AFLKELVTKLS KMTADGLTDLVNHTTMFRDEKRQAEERIASAKAN TNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGID+VGMDYESKYDDFM
Sbjct:    1 MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLSPKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDTVGMDYESKYDDFM 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A836CNA4_9STRA (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA4_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.090e-36
Identity = 103/252 (40.87%), Postives = 139/252 (55.16%), Query Frame = 0
Query:    3 DSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGG---ARGQGAGGGLSGLALKNMQDHVKLAIELAERMD----SSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRA-----NKKKSIKKKKAHSDVFGGDFDG--DGIDSVGMDYESKYDDFM 240
            DSWED++F  P+ VPP  V  SW+DEE       A  P    +    +A          IAA  E   Q  ETAE+RRLRER RVEE+D+ LTEDLFGGGG   A    A  G+ G+ LK  QDHVKLA++L E++     S    ++ A LKEL+T++  K++ +    L  H   F+D K  AE++  +       ++  Q+A     N +KS  KKK H+D+FGG +DG  D  D +  +YE  YDDFM
Sbjct:    2 DSWEDDDFTPPTLVPPK-VTQSWDDEEXXXXXXXAK-PTQPTEKQLEQARKAREAEAMRIAAAHEAAQQEAETAEERRLRERRRVEESDHALTEDLFGGGGTAEAAEAPAQAGVEGIPLKTTQDHVKLALDLGEKLSKDGSSGSSGNILALLKELITRVEGKLSLEETNQLALHLNKFKDAKMVAEQKRQA-------ILKKQKAXXXXRNAEKS--KKKQHADLFGGAYDGVGDQYDELATNYEDAYDDFM 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A7S2C417_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C417_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.390e-18
Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 0
Query:    1 MADSWEDEEF---DLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGG---GLSGLALKNMQDHVKLAIELAERMDS--SKPAHMAAFLKELVTKLSSKMTADGLTDLV 167
            M D+W+D+EF   DL    PP   PVS  D+EE+ E       G APK+SA K A            +LE+ LQ  ET ++RRLRER  +E AD++LT+DLFGGG A+ +       G+ G +LK+++DH+ LA ++ ER+++  SK  ++ A LKE V K    +T   L +++
Sbjct:    1 MGDAWDDDEFEVSDLNGGFPP---PVSNWDDEEEFEPPPLPGHGEAPKLSAEKQAKLKNQKNAKKRNDLESALQEEETDDERRLRERLEIENADHELTDDLFGGG-AKSETVVKIVQGVEGYSLKSLKDHLTLAHDVIERVENNKSKQNYIHAMLKEFVKKFDDHLTPGDLGEII 171          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A6V1PD14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD14_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 9.820e-16
Identity = 87/273 (31.87%), Postives = 128/273 (46.89%), Query Frame = 0
Query:    3 DSWEDEEFDLPS---SVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXX---------IAAELETRL--QLGETAEQRRLRERNRVEEADNDLTEDLFGGGGA---------------------RGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYDDFM 240
            DSWED+EFD+P+   SV P A P +W+           V    APK    K   XXXXXXXX         I  +L  +L  Q  ET E+RR+RER  +EEAD++LTE+L  G GA                     + Q AG  L  LA+ +++D +  A +LA+R++ +   H+ AF KE++   +  +T D +++L+    + +++K      + +AK    +                 AH D FGGDF           Y+  YDDFM
Sbjct:    2 DSWEDDEFDVPAFNGSVAPPAAPTNWDXXXXXXXXXAPVDDEFAPKEPTVKQKAXXXXXXXXXXXXXXXXXIRKKLAVKLAIQANETDEERRIRERREIEEADHELTEELLSGAGAXXXXXXXXXXXXXXXXXXPATKKQEAG--LGALAMDSLEDFMTTAAKLAQRLNGAPNHHVLAFFKEMLRGSTESLTTDDVSELIALANVIKNDK------VKAAKGKTKSXXXXXXXXXXXXX----AHEDTFGGDF---XXXXXXTGYDDVYDDFM 259          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: B7G7B8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7B8_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 1.930e-14
Identity = 58/167 (34.73%), Postives = 95/167 (56.89%), Query Frame = 0
Query:   77 EQRRLRERNRVEEADNDLTEDLFGGGGAR-GQGAGGGLSGLA-----LKNMQDHVKLAIELAERMDSSKPAHMAA-FLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKY 236
            E RR+++R  VEEADN LT+DLFGG  A+ G+GA GG +  A     +K+++DH+K A ++AE M      H+AA F KEL+ +    +  D +T+++    + ++EK QA +R+   K        +++A+K    K  +   + FG + + D  D +G DYE  +
Sbjct:   99 ELRRMKQRQ-VEEADNALTDDLFGGVDAKAGKGATGGAAAAAGDKVIMKDVKDHLKHARKVAECMQGHGKIHLAAAFFKELLQQSKDVLDDDAITEIIKTCNVIKNEKVQAAKRVTKVKGQ---AQKSKKADKAAEAKALQKQVETFGANDEYDEYDHIGADYEDAF 261          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A1Z5JPF2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPF2_FISSO)

HSP 1 Score: 75.5 bits (184), Expect = 1.170e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 0
Query:   75 TAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGGLSG--LALKNMQDHVKLAIELAERMDSSKPAHMA-AFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKY 236
            T ++RR  ER R+E ADN+LT+DLFG    + +  G   +G  + LK+++DH+K A ++AE M      H A AF KE VT     +  D +T+L+    + ++EK QA +R    +A  +  +     +K    K ++   + FG +   D  D  G  YE  +
Sbjct:   95 TPDERRQLERQRIEAADNELTDDLFGADNTKNKATGAAAAGDVVVLKDLKDHLKHARKVAEAMKKHGNVHFASAFFKECVTSSKDVLDDDAVTELIKTLNVIKNEKVQAAKRKVKGQAQKSKKV-----DKVAEAKARQKMIETFGDNDKFDQYDEFGERYEDDF 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A6T7HVD2_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HVD2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.190e-11
Identity = 53/186 (28.49%), Postives = 100/186 (53.76%), Query Frame = 0
Query:   63 AAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGG-----------GGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMAA-FLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKY 236
            A ELE  ++   T E+RRL  + R+E+AD+ LT+DLFGG            G++  GAG     + LK+++DH+K A ++ + + +    H+AA FLKE++ + S  +    +T++++   + ++EK  A ++    +A  +      + +K    K KK  ++++G + + D  D +G  YE  +
Sbjct:   87 AIELEADMEANMTIEERRLLAKQRIEDADHALTDDLFGGVDRSGPVGVVDAGSKAMGAG---DTVVLKDLKDHLKHARKVGQCLKAHGKIHLAAAFLKEVIQESSDALDDGAITEIISICNVIKNEKVAASKKKVKGQAQKS-----AKRDKVAETKAKKLSAELYGDNDNYDAYDEMGGAYEDDF 264          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A7R9WM26_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM26_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.430e-10
Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = 0
Query:   83 ERNRVEEADNDLTEDLFGGGGARGQGAGGGLSG----LALKNMQDHVKLA-IELAERMDSSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYDDF 239
            ER RVE+ADN L ++LFGG GA+ +GA     G    LAL  ++DH+K A +  A      K      FL+E++      +  + +++L+    + ++EK QA++R    K  N    + ++A K+   K KK H + FG + + D  D +G  Y+  YD F
Sbjct:  100 ERKRVEDADNALADELFGGAGAK-KGAAATTKGAGDQLALMTLKDHLKHAKVVSAALKKHGKTLLATTFLREVIQGSKDTLDVNAISELITACNVIKNEKIQADKR----KTKNQGPKS-KKAEKEAQAKAKKIHDETFGDNNEYDQYDEIGESYQDDYDFF 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: A0A3M6VIR0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIR0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.130e-9
Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 0
Query:    3 DSWEDEEFDLPSSVPPTAVPVSWEDEEEDQ--------EDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRL--QLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGG-------LSGLALKNMQDHVKLAIELAERMDSSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEK 177
            DSW+D+EF++PS  P   V V+W+DEEE++         DA A    L PK                  A  + RL  Q+ ET EQRR RE+  +EEAD ++  D F G  A  + A G        +S + L ++ DH  L   ++ R+  S   +    +K ++TK S  +TAD + ++     + ++EK
Sbjct:    2 DSWDDDEFEVPSVTP---VAVNWDDEEEEEVEPVVTAKTDAAATKGPLKPKQLKKIKLKEIEEKQNMEIALTKARLAAQIDETDEQRRAREKASIEEADFEMAIDAFAG--APPKPAVGATNDTDATISSMRLLSLADHEHLGDVVSSRLAMSNSKYALECIKVILTKSSVNLTADDMKEITTIVNVVKNEK 188          
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Match: K3WWC7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWC7_GLOUD)

HSP 1 Score: 65.9 bits (159), Expect = 2.930e-9
Identity = 76/259 (29.34%), Postives = 118/259 (45.56%), Query Frame = 0
Query:    3 DSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPG---LAPK-------MSAAKAAXXXXXXXXXIAAELETRL--QLGETAEQRRLRERNRVEEADNDLTEDLFG--------GGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMAAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYE-SKYDDFM 240
            DSW+D+EF++PS    T V  +W+DE        A  P    LAPK       +   K           IA   + RL  Q  ET  +R+ RE+ ++EEAD +   D F           GA G  A   +SG+ L ++ DH +L   +A R+++S   +    +K ++TK S  +TAD + DL     + +++K      IA+AK             KKK +  K+ +++V      G  I +   +Y   +YDDFM
Sbjct:    2 DSWDDDEFEVPSVAENTKVSANWDDEXXXXXXVAAPEPSQTSLAPKGPLKPKQLKKMKLKEMEEKRKMDIAL-TKARLAEQANETEAERKAREKRQMEEADFEAAIDAFATVTKPAPVAPGADGD-AESAISGMRLLSLADHEQLGEVVANRINASNAKYALECIKVIITKGSVNLTADDMKDLTTIINVIKNDK------IAAAKPKG----------KKKKVTGKQGYANVERSTGGGGKIINDDEEYGYDEYDDFM 242          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1118.791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G0I5_ECTSI5.530e-14898.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNA4_9STRA6.090e-3640.87Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2C417_9STRA2.390e-1839.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V1PD14_HETAK9.820e-1631.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G7B8_PHATC1.930e-1434.73Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JPF2_FISSO1.170e-1232.12Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A6T7HVD2_9STRA6.190e-1128.49Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7R9WM26_9STRA1.430e-1032.72Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A3M6VIR0_9STRA2.130e-931.25Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
K3WWC7_GLOUD2.930e-929.34Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..197
NoneNo IPR availablePANTHERPTHR21681:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..240
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 2..240
e-value: 5.1E-30
score: 105.2
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1118contigE-siliculosus-1a_F_contig1118:28045..32937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1118.791.1mRNA_E-siliculosus-1a_F_contig1118.791.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1118 27582..33385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1118.791.1 ID=prot_E-siliculosus-1a_F_contig1118.791.1|Name=mRNA_E-siliculosus-1a_F_contig1118.791.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=241bp
MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAK
AAKTAAEKDARIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFG
GGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMAAFLKEL
VTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANNTNVIANQRA
NKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYDDFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j