prot_E-siliculosus-1a_F_contig1117.781.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1117.781.1
Unique Name	prot_E-siliculosus-1a_F_contig1117.781.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	622

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1117.781.1 vs. uniprot
Match: A0A6H5K5G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G3_9PHAE)

HSP 1 Score: 940 bits (2430), Expect = 0.000e+0
Identity = 572/652 (87.73%), Postives = 576/652 (88.34%), Query Frame = 0

Query:    1 MNQQPQTRVLPSFSGLSSAVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXXXXXXXFAPGISNRRGRHASPTSETPANGFDGGGRNLSVSGXXXXXXXSSS---KASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSMLAQANGNGRFVSVKSSSASRRKSAPLPQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTPGLMPWRNGDPPVAMPAAPGVHGRAPPPPPGLPGHGQHDALTATGASAGAPFGKP--LENGSSVGFVAPPSAGFNNGGAIIRAAMSMLPPGGMPTPSHDHQQ------------------------MPFVSQAPGVANGXXXXXXXXXXXXXXXX-FHDHNALSAAAPEILTQMGYRRAPAFGPEGIWGANDAGANAG 622
            MNQQPQ R LPSFSGLS AVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXX        GIS+RRGRHASPT ET ANGFDGGGRNL    XXXXXXX      KASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKIL+SRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSMLAQANGNGR +SVKSSSASRRKSAPLPQLP   XXXXXXXXXXXXXXXXXX              TSTPGLMPWRNGDPPVAMPAAPGVHGRAPPPP GLPGHGQHDALTATGAS GAPFGKP  LENGSSVGFV PPSAGFNNGGAIIRAAMSMLPPGGMPTPSHD                           MPFVSQAPGVAN XXXXXXXXXXXXXXXX FHDHNALSAAAPEILTQMGYRRAPAFGPEGIWGANDAGA+ G
Sbjct:    1 MNQQPQARALPSFSGLSLAVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXX--------GISSRRGRHASPT-ETSANGFDGGGRNLXXXXXXXXXXXXXXXXXKASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILVSRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSMLAQANGNGRLLSVKSSSASRRKSAPLPQLPPLPXXXXXXXXXXXXXXXXXX--------------TSTPGLMPWRNGDPPVAMPAAPGVHGRAPPPP-GLPGHGQHDALTATGASPGAPFGKPPPLENGSSVGFVGPPSAGFNNGGAIIRAAMSMLPPGGMPTPSHDPNDRLQXXXXXXXXXXXXXXXXXXXXXMPFVSQAPGVANXXXXXXXXXXXXXXXXXXFHDHNALSAAAPEILTQMGYRRAPAFGPEGIWGANDAGASVG 628

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1117.781.1 vs. uniprot
Match: D7FRL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL6_ECTSI)

HSP 1 Score: 665 bits (1715), Expect = 1.270e-235
Identity = 372/384 (96.88%), Postives = 373/384 (97.14%), Query Frame = 0

Query:    1 MNQQPQTRVLPSFSGLSSAVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXXXXXXXFAPGISNRRGRHASPTSETPANGFDGGGRNLSVSGXXXXXXXSSSKASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSML 384
            MNQQPQ R LPSFSGLSSAVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXXXXX   A GIS+RRGRHASPTSETPANGFDGGGRNLS S XXXXXX SSSKASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPA YVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGV ANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSML
Sbjct:    1 MNQQPQARALPSFSGLSSAVNDARDYENSRGSRNGSEVQXXXXXXXXXXXXXXXXV--ATGISSRRGRHASPTSETPANGFDGGGRNLSGS-XXXXXXPSSSKASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQEDDVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAVYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGVTANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSML 381

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1117.781.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1117.781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K5G3_9PHAE	0.000e+0	87.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRL6_ECTSI	1.270e-235	96.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 418..445
None	No IPR available	PANTHER	PTHR14445:SF41		coord: 39..451
None	No IPR available	PANTHER	PTHR14445	GRB10 INTERACTING GYF PROTEIN	coord: 39..451

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1117	contig	E-siliculosus-1a_F_contig1117:6267..10924 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1117.781.1	mRNA_E-siliculosus-1a_F_contig1117.781.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1117 6006..10924 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1117.781.1 ID=prot_E-siliculosus-1a_F_contig1117.781.1|Name=mRNA_E-siliculosus-1a_F_contig1117.781.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=622bp
MNQQPQTRVLPSFSGLSSAVNDARDYENSRGSRNGSEVQQQQDNNNSSTA
SNSNNNNFAPGISNRRGRHASPTSETPANGFDGGGRNLSVSGGGGGGVPS
SSKASGATGALLLQDTLSPLLEEVDALFERSKDIVASLKAPGGGNKPQED
DVEVEIMERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAAL
LCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDG
DGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGL
LKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGD
IDDFVAFHERVVKLVGMCRNRVRRAAYATSKSMLAQANGNGRFVSVKSSS
ASRRKSAPLPQLPPPPSQQQQQQQQQQQQQQLHQQQQQLLLQQQQQPPTS
TPGLMPWRNGDPPVAMPAAPGVHGRAPPPPPGLPGHGQHDALTATGASAG
APFGKPLENGSSVGFVAPPSAGFNNGGAIIRAAMSMLPPGGMPTPSHDHQ
QMPFVSQAPGVANGGAAAAAAAAAAPPPPPFHDHNALSAAAPEILTQMGY
RRAPAFGPEGIWGANDAGANAG