prot_E-siliculosus-1a_F_contig1115.772.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1115.772.1
Unique Nameprot_E-siliculosus-1a_F_contig1115.772.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length106
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1115.772.1 vs. uniprot
Match: D8LU35_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU35_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.900e-56
Identity = 94/105 (89.52%), Postives = 95/105 (90.48%), Query Frame = 0 
Query:    1 MCSRMFPQHAIESHAWECRPPPADDGAMSTVPSSTGRASATEAACNTFLDNSEEFQARNHTAEQQPKATAAETYLIPAEGGNSNCVDSGAPKYVPQASEGKNAMQ 105
            MCSRMFPQHAIESHAWECRPPPADDGAMSTVPSSTGRASATEAACNT LDNS EFQAR+HT E QPKATAA TYLIP EGGNSNC D GAPK VPQ SEGKNAMQ
Sbjct:    1 MCSRMFPQHAIESHAWECRPPPADDGAMSTVPSSTGRASATEAACNTLLDNSGEFQARHHTTELQPKATAAGTYLIPPEGGNSNCADRGAPKQVPQESEGKNAMQ 105
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1115.772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU35_ECTSI7.900e-5689.52Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1115contigE-siliculosus-1a_F_contig1115:6230..6547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1115.772.1mRNA_E-siliculosus-1a_F_contig1115.772.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1115 6230..6547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1115.772.1 ID=prot_E-siliculosus-1a_F_contig1115.772.1|Name=mRNA_E-siliculosus-1a_F_contig1115.772.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=106bp
MCSRMFPQHAIESHAWECRPPPADDGAMSTVPSSTGRASATEAACNTFLD
NSEEFQARNHTAEQQPKATAAETYLIPAEGGNSNCVDSGAPKYVPQASEG
KNAMQA
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