prot_E-siliculosus-1a_F_contig11141.769.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11141.769.1
Unique Nameprot_E-siliculosus-1a_F_contig11141.769.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length142
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 6.090e-84
Identity = 124/142 (87.32%), Postives = 133/142 (93.66%), Query Frame = 0
Query:    1 MQELRNFEAVKGGGTTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNTFRSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            MQELRNFEAVKGG TTPTRR AQVKGSSGGRQGQ+R+GGGGTGSGGTNTFRSASPGR +GGYGGRRVMTV++++ EDECAEF+RV+DIH SPRTNSQ   CPFFAWFTSVEEKDRHRRAFGSRCL CGSEGHFVRDCDKGYI
Sbjct:  109 MQELRNFEAVKGGATTPTRRSAQVKGSSGGRQGQKRDGGGGTGSGGTNTFRSASPGRLDGGYGGRRVMTVDEVDCEDECAEFQRVYDIHVSPRTNSQMKDCPFFAWFTSVEEKDRHRRAFGSRCLKCGSEGHFVRDCDKGYI 250          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 6.430e-77
Identity = 125/147 (85.03%), Postives = 130/147 (88.44%), Query Frame = 0
Query:    1 MQELRNFEAVKGGGTTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNT-----FRSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            M ELRNFEAVKGG TTPTRRMAQVK SSG RQGQR  GGG TGSGGTNT      RSASPGRS+GGYGGR VMTVEDM+YEDECAEF+RV+DIHA+PRTNSQA  CPFFAWFTSVEEKDRHRRAFG RCLNCGSEGHFVRDCDKGYI
Sbjct:  163 MHELRNFEAVKGGATTPTRRMAQVKSSSGWRQGQRGGGGGRTGSGGTNTRVMTGXRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFQRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLRCLNCGSEGHFVRDCDKGYI 308          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 7.030e-77
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0
Query:    1 MQELRNFEAVKGGGTTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNTFRSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            M ELRNFEAVKGG TTPTR MAQVK SSG RQGQR  GGG TGSGGTNTFRSASPGRS+GGYGGR VMTVEDM+YEDECAEFKRV+DIHA+PRTNSQA  CPFFAWFTSVEEKDRHR+AFG RCLNCGSEGHFVRDCDKGYI
Sbjct:  367 MHELRNFEAVKGGATTPTRMMAQVKSSSGWRQGQRGCGGGRTGSGGTNTFRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRQAFGLRCLNCGSEGHFVRDCDKGYI 507          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.340e-71
Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0
Query:   17 PTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNTFRSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            PTRRMAQVKGSSGGRQGQR +GGG TGSGG NTFRSASPGRS+GGYGGRRVMTVEDM+YED+C EFKRV+ IH+SPRTNSQ N CPFFAWFTSVEEKDRHRRAFGSRCLNCGSEG FVRDC KGYI
Sbjct:  129 PTRRMAQVKGSSGGRQGQRCDGGGRTGSGGGNTFRSASPGRSDGGYGGRRVMTVEDMDYEDKCEEFKRVYGIHSSPRTNSQVNDCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGQFVRDCVKGYI 254          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 5.790e-45
Identity = 78/93 (83.87%), Postives = 84/93 (90.32%), Query Frame = 0
Query:   50 FRSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            FRSASPGRS+GGYGGR VMTVEDM+YEDECAEFKRV+DIHA+PRTNSQA  CPFFAWFTSVEEKDRHRRAFG  CLNCGSEGHFVR   +G +
Sbjct:  596 FRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLTCLNCGSEGHFVRIVIRGTL 687          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.590e-12
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   39 GGGTGSGGTNTFRSA-SPGRSNGGYG-----GRRVMTVEDMEYEDECAEFKRVHDIHAS-PRTNSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 142
            GGG  S GT ++ SA S GR    YG     G RVM + + E EDE  EFK+VH +     +     ++ PF+  F S +E+D  R+A+G +CLNCG + HFVR+C   +I
Sbjct:  694 GGGNASAGTTSYASAASAGRM---YGKQPSQGARVMNIHE-EMEDEEKEFKKVHYVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGLKCLNCGDQSHFVRECTHPFI 800          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5K8R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R6_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.600e-11
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MQELRNFEAVKGGGTTPTRRMAQVKGSSGGRQGQRREGGGGTGS 44
            M E+R+FEAV+GG TTPTRRMAQVKGSSGGRQGQRR+GGG TGS
Sbjct:  278 MHEVRSFEAVEGGATTPTRRMAQVKGSSGGRQGQRRDGGGRTGS 321          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.670e-7
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 0
Query:   60 GGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRT-NSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEG--HFVRDC 137
            G  G R VMTV   +Y+DE  EF +V  +    +      +  PF+  FT+ +E+DR RR FG +CLNCG E   H  R+C
Sbjct:  255 GSAGARAVMTV--AQYDDESREFWQVSQVSRGNKGFGRNDDDPPFYVQFTNNKERDRARREFGPKCLNCGVEEPFHLAREC 333          
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Match: A0A6H5JHS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS6_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 6.240e-6
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0
Query:   68 MTVEDMEYEDECAEFKRVHDIHASPRT-NSQANHCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEG--HFVRDC 137
            MTV   +Y+DE  EF +V  +    +      +  PF+  FT+ +E+DR RR FG +CLNCG E   H  R+C
Sbjct:    1 MTV--AQYDDESREFWQVSQVSRGNKGFGLNDDDPPFYVQFTNNQERDRARREFGPKCLNCGVEEPFHLAREC 71          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11141.769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G674_ECTSI6.090e-8487.32CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRF6_9PHAE6.430e-7785.03CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBL4_9PHAE7.030e-7788.03CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE1.340e-7188.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K255_9PHAE5.790e-4583.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE4.590e-1241.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K8R6_9PHAE3.600e-1184.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNG1_9PHAE3.670e-740.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHS6_9PHAE6.240e-639.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 123..139
e-value: 5.2E-4
score: 29.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 123..139
e-value: 8.0E-6
score: 25.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 123..139
score: 9.999
NoneNo IPR availableGENE3D4.10.60.10coord: 76..140
e-value: 4.2E-5
score: 25.5
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 112..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11141contigE-siliculosus-1a_F_contig11141:674..1099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11141.769.1mRNA_E-siliculosus-1a_F_contig11141.769.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11141 674..1422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11141.769.1 ID=prot_E-siliculosus-1a_F_contig11141.769.1|Name=mRNA_E-siliculosus-1a_F_contig11141.769.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=142bp
MQELRNFEAVKGGGTTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNTF
RSASPGRSNGGYGGRRVMTVEDMEYEDECAEFKRVHDIHASPRTNSQANH
CPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR001878Znf_CCHC