prot_E-siliculosus-1a_F_contig1109.740.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1109.740.1
Unique Nameprot_E-siliculosus-1a_F_contig1109.740.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length544
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 921 bits (2381), Expect = 0.000e+0
Identity = 510/560 (91.07%), Postives = 524/560 (93.57%), Query Frame = 0
Query:    1 MKWPLAAVLVGTARSPATGFHVNPIPVRPTTTAAAAAAGVEQNSRITAHRYSRPSRHRVAAARASAAAGLGGAADGVESSLQHLTQPGEEDEDEDEGAFFSAEESLPPTTPQAPARAAPVQPAATEDDNTNAVISTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXX-----NLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNILRVSGTPEQQEAFGKLQELRQSQADEAAPLGGRGAPRMAAGGRGGG------------KKRPGNRSKGARAAFEAVAKSEIFEQ 543
            MKWPLAAVLVGTARSPATGFHVNPIPVR  TT AAA AGVEQ+SR+TA+R SRPSRHRVAAARASA AGLGGAADGVESSLQ LTQPGE+DEDED+GAFFSAEESLPPT+  APARAAP +PAATED NTNAV+STVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQ     XXXXXXXXXXXXX     +LVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLM+HMVQSGQL+EG+DT AAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAE QRPLLHSVSLEFIHPFTNKPMSFKAPMP DMWETAQNILR+SGTPEQQEAFGKLQELRQSQADEAAP+GGRGAPRMAAGGRGGG            KKRPGNRSKGARAAFEAVAKSEIFEQ
Sbjct:    1 MKWPLAAVLVGTARSPATGFHVNPIPVRSKTTVAAA-AGVEQSSRMTAYRVSRPSRHRVAAARASAVAGLGGAADGVESSLQRLTQPGEDDEDEDKGAFFSAEESLPPTSAPAPARAAPARPAATEDGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQSQADEAAPVGGRGAPRMAAGGRGGGXXXXXXXXXGGGKKRPGNRSKGARAAFEAVAKSEIFEQ 559          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.910e-65
Identity = 147/377 (38.99%), Postives = 200/377 (53.05%), Query Frame = 0
Query:  138 VSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHG------------DPGFDSV----VDAPLYRRSSGKVGAVEPWE----------AEEFRAKEAQTRVRNVATAR-------------GLSLCRADILTGRMHQVRVHLKWIGCPIVGDREY---GDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNIL 472
            V  ED  APIDW+LSR+LP  SRRF+RK L  G+V++DGR  KR +RV+ G  I+V                       +   P +  +L VV+ED+H+ VV KP G++ QP A+ PRGT+L+G++HHMV  G+   G +    AA  L QG+V RLD+ TSGI++VAK L ASS LSA+F+  KV K YLAV  G            D G D      +DAPLY+R+SGK+    P +          A     K A TRV+ +  +              GL   + +I TGR HQ+R HL   G P++GD  Y   GD  A    ++ +A      RPLLH++SL   HP TN  +   AP+P DMW    +++
Sbjct:   10 VEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITVAAAAADA------------VAPPSEQLPAQDLKLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEV---AAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 219 bits (559), Expect = 1.180e-62
Identity = 127/343 (37.03%), Postives = 198/343 (57.73%), Query Frame = 0
Query:  134 ISTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWE----AEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNIL 472
            +S  V  E+N AP+DW L+   PQ SRR++RK ++ G+VKV+G+ V+RF +++ G  + +++    +++              NL        L V+FEDD L  V+KPAG++C P  +   GTVL+GL+HH +++ Q        A +  TLS+GIV RLDK TSG+M+ AK   A+ KLS  F   +  K+YL VC+G     +VV+ P+YR  +GK+  +   +      E R K++++ V+ +   +GLSL   +++TGRMHQ R+HLK++G PI+GD  YG      RV+K +       R LLH+  L   HP T + +   AP+P+DMW   ++ +
Sbjct:   58 VSAEVDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEI----------EGAENL-------SLSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQ-----QVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYG----LARVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMWGVIEDCI 374          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 9.040e-51
Identity = 143/412 (34.71%), Postives = 206/412 (50.00%), Query Frame = 0
Query:  127 DDNTNAVISTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMV---------QSGQLEEGSDTTAAAANT---------------------------------LSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGD--PGFDSVVDAPLYRRSSGKVGAVEP----W------------------EAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHL-KWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNI 471
            D + + V + VV  +D+  P+D VL+R+ P+ SRRF+RK ++AG VKVD ++VKR  ++++G  +S      ++                  + P+ L  L V+FED+HL  V KP GMI  P  +   GTVLHG++H +          ++    EG+   A   +T                                 L+QG+V RLD  TSG+++VAK   A+  ++  F++  VKK+Y+AV  GD  PG   +   PL R SSGK+   +     W                  EA+   A+ A T VR +AT   LS+  A+ILTGRMHQ+RVHL +   CP++GD  YGD + N R  KRS +  +  R LLH+ SLEF HP T K +S   P+P DM    Q I
Sbjct:   46 DSHQSDVQTFVVGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVSAQFKPDEKPS----------------MEPEDLG-LEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRA-KRSEN-LQVSRTLLHAHSLEFTHPITGKHVSLSTPVPLDMKRIVQRI 437          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 181 bits (458), Expect = 8.270e-48
Identity = 117/332 (35.24%), Postives = 171/332 (51.51%), Query Frame = 0
Query:  135 STVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYR--RSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDM 464
            + +V +E NK  +D  LS   P+ SR ++    + G V+V GR VK+  +++ G  +SV      +                    P+ +P L +++ED+HL  V KP GM+  P   +  GT  + L  HM   G+        A   + L  GIV RLDK TSG+++ +K     +KLS +F   K+KK YLAVC G+PG D  ++  + R  ++  K+  +   +    RA+ A T V  ++    LSL R  I TGR HQ+RVHL     P++GD  YG+ + N R  KR       QRPLLH+  LE  HP T +P+S KAP+P DM
Sbjct:   68 TVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAE----------------PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGE----DYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFG----LQRPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A6M2A1C5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A1C5_9BACT)

HSP 1 Score: 169 bits (429), Expect = 8.870e-45
Identity = 114/331 (34.44%), Postives = 169/331 (51.06%), Query Frame = 0
Query:  135 STVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRS-SGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDM 464
            S VVS ED    +D  L++  P HSR +++  ++   V ++G  +K+  R+  G  + V      Q L                V P+ +P L +++ED+ + VV KP+GM+  P   +  GT  + L+HH  Q  + E            L  GIV RLDK TSGI++ AK LAA  KL   F    ++KQYL +C G P  +    AP+ R   + K   + P        KEA+T    +   +GLSL +A ++TGR HQ+RVHLK + CP++GD  YG P  N + +          R +LH+ SL+ IHP +  P+ F AP+P+DM
Sbjct:    4 SLVVSKEDLGERVDKFLTQYFPNHSRTYFQFLIDEESVLLNGHPIKKQHRLVEGDEVEVSF----QTLPMLD------------VKPEAIP-LEILYEDESIIVVNKPSGMVVHPAPGSYSGTFANALLHHCKQLKKEE---------FENLRPGIVHRLDKDTSGILIAAKNLAAHQKLVEQFASRSIEKQYLVICLGVPK-EGECSAPIKRHPINRKQMTINP------EGKEARTHFTVLGRRKGLSLVQAKLITGRTHQIRVHLKSMNCPVLGDTTYGSPSLNQKYN--------TTRQMLHARSLKMIHPISEIPLEFIAPIPSDM 293          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.640e-43
Identity = 119/332 (35.84%), Postives = 170/332 (51.20%), Query Frame = 0
Query:  147 IDWVLSRRLPQHSRRFYRKALEAGDVKVDGRK-VKRFIRVKRGARISVD-LGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEE-FRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNILRVS 475
            ID  L  ++P  SR ++      G V V+G   VK+  +V  G  ISV  L   +  LG                 P+ +P L V+FED  L  + KP GM+  P      GT ++ L+HH+ +     +GS  +   +  L  G+V RLDK TSG+++ AKT     +LS LF   KV+K YLAVC G+PG D  +D P+ R ++ +   V   + +   RA+ A + VR  A    LS+    I TGR HQ+RVHL+    PIVGD  YG+ + N R+ KR        RPLLH++ LEF HP T   +  +AP+P DM    + +  V+
Sbjct:   67 IDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLG-----------------PEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSK-----DGSVVSLGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGI-----SRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVA 369          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT)

HSP 1 Score: 164 bits (416), Expect = 6.350e-43
Identity = 114/337 (33.83%), Postives = 178/337 (52.82%), Query Frame = 0
Query:  137 VVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWETAQNILR 473
            +V++E+ K  +D +L+ R P+ SR ++++ ++   V V+G++VK+ I ++    I +      +                  + P+ +P L +++ED+ L V+ KPAG++  P A    GT+++GL+ H  Q             AA +L  GIV RLDK TSG++V AK   A  KLS LF   +V K+YLA+C  +PG + ++D P+ R     V   E    +E R +EAQT   ++     LSL R    TGR HQ+RVHLK I  PI+GD  YG+   N +              LLH+  L F+HP + + + FKAP+P DM +   +I+R
Sbjct:    7 IVTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFVLSPEIS----------------LEPEEIP-LDILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHCKQ-----------LKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGRHP---VRRKEMTILKE-RGREAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYG--------LTHQLLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A1F8JRD2_9BACT (Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=204428 RepID=A0A1F8JRD2_9BACT)

HSP 1 Score: 163 bits (413), Expect = 1.850e-42
Identity = 113/329 (34.35%), Postives = 169/329 (51.37%), Query Frame = 0
Query:  137 VVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRS-SGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDM 464
            +++ ED    +D +L+     +SR +++  +EAG V ++G  VK+  + + G  +S+ L                       +F      L ++FED+HL  + KPAGM+  P    P  T ++ L+HH       +E  DT  A    L  GIV RLDK+TSG+++ AK+ AA  ++ +LF + KVKK Y+A+C G+P  D  + APL R     K  AV P        KEA T +R +++    S      LTGR HQ+RVH++ IG PI+GD  YG    N ++        +  R LLH+ SL FIHPF  +P+   AP+P  M
Sbjct:    8 LITQEDAGRRLDLLLASHYSSYSRSYFQYLMEAGAVLLNGSPVKKRTKPRLGDEVSLSL-----------IPLPEMRLEPEAIF------LDILFEDEHLIAINKPAGMVVHPAPGHPSHTFVNALLHHC------KELPDTLGAP---LRPGIVHRLDKETSGVLLAAKSQAAHREIVSLFSERKVKKTYVAICLGNPK-DQTIRAPLLRHPVRRKEIAVAP------SGKEAVTSIRVLSSQGNYSFVEIAPLTGRTHQIRVHMRHIGAPILGDPVYGPAFLNKKL--------QLSRQLLHARSLFFIHPFEKRPLEISAPLPAAM 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Match: A0A6M2A8C7_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A8C7_9BACT)

HSP 1 Score: 163 bits (412), Expect = 2.380e-42
Identity = 110/330 (33.33%), Postives = 168/330 (50.91%), Query Frame = 0
Query:  137 VVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQQLGXXXXXXXXXXXXXNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFTNKPMSFKAPMPTDMWE 466
            VV  E     +D  LS R P +SR++++  +E   V V+G+  K+  ++  G  I ++    ++                  + P+ +P L +++ED+ +  V KPAGM+  P A    GT +H L+++             T  +  TL  GIV RLDK+TSG+++ AKT  A   L   F   KVKK+YLA+C G+PG + +++  + R  + +    +     E   KEA T   ++ T   LS  R    TGR HQ+RVHL+ +G PI+GD  YG P  N +          ++R LLH+ SL+F HP T K +  KAP+P DM E
Sbjct:    9 VVEKEGEGVRLDKFLSTRFPDYSRQYFQYLIETHLVLVNGQIAKKRTKLIEGDEIEIEFALTKEIS----------------LTPEPIP-LTILYEDEEMLAVNKPAGMVVHPAAGNWTGTFVHALLYYC-----------QTLPSQETLRPGIVHRLDKETSGVLLAAKTERAQQGLVEAFANQKVKKEYLAICVGNPG-NRLIEGNIGRHPTKR----KQMSLREEGGKEASTECLSLGTYENLSFVRLFPKTGRTHQLRVHLQSVGTPILGDSVYGIPSQNKKWG--------SERQLLHAASLQFPHPITEKSIEVKAPIPDDMRE 297          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1109.740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE0.000e+091.07S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA1.910e-6538.99Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK1.180e-6237.03Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA9.040e-5134.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXK7_HETAK8.270e-4835.24Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A6M2A1C5_9BACT8.870e-4534.44Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A836CH15_9STRA1.640e-4335.84Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6M1ZVU5_9BACT6.350e-4333.83Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A1F8JRD2_9BACT1.850e-4234.35Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=20... [more]
A0A6M2A8C7_9BACT2.380e-4233.33Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 145..201
e-value: 0.0024
score: 27.1
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 147..189
e-value: 4.3E-5
score: 23.1
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 145..204
score: 10.586
NoneNo IPR availableGENE3D3.30.2350.10coord: 228..474
e-value: 5.4E-59
score: 201.4
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 143..470
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 143..470
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..543
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 147..209
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 146..469
e-value: 1.8E-62
score: 209.3
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 133..200
e-value: 1.2E-8
score: 36.3
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 235..402
e-value: 9.1E-26
score: 90.9
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 291..305
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 224..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1109contigE-siliculosus-1a_F_contig1109:24931..28224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1109.740.1mRNA_E-siliculosus-1a_F_contig1109.740.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1109 24724..28717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1109.740.1 ID=prot_E-siliculosus-1a_F_contig1109.740.1|Name=mRNA_E-siliculosus-1a_F_contig1109.740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=544bp
MKWPLAAVLVGTARSPATGFHVNPIPVRPTTTAAAAAAGVEQNSRITAHR
YSRPSRHRVAAARASAAAGLGGAADGVESSLQHLTQPGEEDEDEDEGAFF
SAEESLPPTTPQAPARAAPVQPAATEDDNTNAVISTVVSDEDNKAPIDWV
LSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQQQ
QLGASAVAAATTTPPPNLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPC
AAAPRGTVLHGLMHHMVQSGQLEEGSDTTAAAANTLSQGIVQRLDKQTSG
IMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSS
GKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVH
LKWIGCPIVGDREYGDPEANFRVSKRSAHRAEAQRPLLHSVSLEFIHPFT
NKPMSFKAPMPTDMWETAQNILRVSGTPEQQEAFGKLQELRQSQADEAAP
LGGRGAPRMAAGGRGGGKKRPGNRSKGARAAFEAVAKSEIFEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR006224PsdUridine_synth_RluC/D_CS
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf
IPR006225PsdUridine_synth_RluC/D
IPR002942S4_RNA-bd