prot_E-siliculosus-1a_F_contig11084.735.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11084.735.1
Unique Nameprot_E-siliculosus-1a_F_contig11084.735.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length111
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A6H5JUH8_9PHAE (UPF0020 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 9.950e-59
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0
Query:    1 RAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK 99
            RAGARKSGREGEARIVKP+ERFDHMPHTQHYPVEDVLVDLLEVAAQ L +GGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK
Sbjct:  306 RAGARKSGREGEARIVKPDERFDHMPHTQHYPVEDVLVDLLEVAAQTLALGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK 404          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: D8LT48_ECTSI (UPF0020 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT48_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.980e-58
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
Query:    1 RAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK 99
            RAGARKSGREGEAR VKPEERFDHMPHTQHYPVEDVLVDLLEVAAQ LV+GGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK
Sbjct:  306 RAGARKSGREGEARTVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTK 404          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A836CPF8_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.390e-28
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    1 RAGARKSG-REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGAR++G R      V+PE+R DH+P T+ Y VEDVLVDLL+VAA+AL  G RLCYL+  T+E   +  LP HPCL L  HS+QGLT+  CRRL+TM KV+E
Sbjct:  307 RAGARRTGSRRANVTPVRPEQRADHVPMTRPYAVEDVLVDLLDVAARALRRGRRLCYLMPGTYETCTRASLPGHPCLRLVAHSVQGLTKTTCRRLVTMVKVAE 409          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A7S2S7P8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7P8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.010e-21
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 RAGARKSG---REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAG RKSG   +  + R V  + R DH+P T+ YPVE+VL+DLL++AA  L++GGRL YLL +T +F LQ  LP HPCL +   S Q LT  + R LIT+ K++E
Sbjct:   80 RAGGRKSGSRRKPEDVRAVPEDRRLDHIPQTRPYPVEEVLLDLLDLAAMTLILGGRLVYLLPTTHDF-LQSHLPAHPCLRVVACSEQPLTLKISRWLITVEKIAE 183          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A448ZQV7_9STRA (UPF0020 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQV7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.520e-21
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 RAGARKSGREGE-ARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGAR++G   E  R +  E R DH+  T+ Y V DV+ DLL+VAA+ LVVGGRL Y++ S  +FD +RDLPRH CLEL H   Q  +  L RR++ M KVS+
Sbjct:  468 RAGARQTGSRLENPRPILEENRHDHIAQTKPYVVSDVMSDLLDVAARTLVVGGRLVYVIPSFRDFDEERDLPRHDCLELVHTCYQPFSTELGRRIVAMEKVSD 570          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A7S0UL30_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UL30_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.930e-21
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    1 RAGARKSGRE-GEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGAR++G +  + R V  E R DH+  T+ Y V DV+ DLL+VAA  L VGGRL Y++ S   FD +RDLPRH CLEL H   Q  +  L RR++ M K+++
Sbjct:   64 RAGARQTGSKLNKPRPVLEENRHDHIAQTKAYAVSDVMSDLLDVAASTLKVGGRLVYIIPSFQNFDEERDLPRHECLELIHTCYQPFSLELGRRIVAMKKIAD 166          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A6V0BUF4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BUF4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-20
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 RAGARKSGRE-GEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGARK+G +  + R +  E R  H+P T+ Y V DV+ DLL+VAA+ LV+GGRL Y++ S  +FD  RDLPRH CLEL H   Q  +  L RR++ M K+++
Sbjct:  543 RAGARKTGSKLDQPRQILEENRHTHIPQTKPYVVSDVMSDLLDVAARTLVLGGRLVYVIPSFRDFDDDRDLPRHDCLELIHVCYQPFSNELGRRIVAMKKITD 645          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A7S0UFW3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFW3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.280e-20
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    1 RAGARKSGRE-GEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGAR++G +  + R V  E R DH+  T+ Y V DV+ DLL+VAA  L VGGRL Y++ S   FD +RDLPRH CLEL H   Q  +  L RR++ M K+++
Sbjct:  136 RAGARQTGSKLNKPRPVLEENRHDHIAQTKAYAVSDVMSDLLDVAASTLKVGGRLVYIIPSFQNFDEERDLPRHECLELIHTCYQPFSLELGRRIVAMKKIAD 238          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A8K1FHH4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHH4_PYTOL)

HSP 1 Score: 91.7 bits (226), Expect = 2.300e-19
Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 RAGARKSGREGEARIVKPEE-----RFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSEG 103
            RAGARKSGR   +  +  E+     +  ++P TQ Y  EDV+ DLLE +AQ L VGGRL YLL +T+E+    DLPRHP LE+  +S Q LT+   RRLITM K SE 
Sbjct:  341 RAGARKSGRRPGSNTMSTEQLAKKAKQTYVPPTQPYAAEDVMKDLLEFSAQTLRVGGRLVYLLPTTYEYT-DADLPRHPQLEIIANSEQKLTKKYARRLITMIKRSEA 447          
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Match: A0A2D4BRW7_PYTIN (tRNA guanosine-2'-O-methyltransferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRW7_PYTIN)

HSP 1 Score: 91.3 bits (225), Expect = 3.380e-19
Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    1 RAGARKSGREGEARIVKPEE-----RFDHMPHTQHYPVEDVLVDLLEVAAQALVVGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKVSE 102
            RAGARKSGR+ ++  V  E      +  ++P TQ Y  EDV+ DLLE AA+ L VGGRL YLL +T+E+    DLPRHP LE+  +S Q LT+   RRLITM K  E
Sbjct:  367 RAGARKSGRKDKSTNVSTESLAKRMKQTYVPPTQPYAAEDVMKDLLEFAARTLRVGGRLVYLLPTTYEYT-DADLPRHPQLEVVANSEQKLTKKYARRLITMIKTKE 472          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11084.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUH8_9PHAE9.950e-5995.96UPF0020 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LT48_ECTSI1.980e-5896.97UPF0020 domain-containing protein (Fragment) n=1 T... [more]
A0A836CPF8_9STRA3.390e-2858.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S2S7P8_9STRA1.010e-2150.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZQV7_9STRA3.520e-2151.46UPF0020 domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A7S0UL30_9STRA3.930e-2148.54Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A6V0BUF4_9STRA1.240e-2048.54Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S0UFW3_9STRA1.280e-2048.54Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A8K1FHH4_PYTOL2.300e-1950.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BRW7_PYTIN3.380e-1951.40tRNA guanosine-2'-O-methyltransferase, putative n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13370:SF3TRNA (GUANINE(10)-N2)-METHYLTRANSFERASE HOMOLOGcoord: 1..102
NoneNo IPR availablePANTHERPTHR13370RNA METHYLASE-RELATEDcoord: 1..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11084contigE-siliculosus-1a_F_contig11084:491..1530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11084.735.1mRNA_E-siliculosus-1a_F_contig11084.735.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11084 491..1530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11084.735.1 ID=prot_E-siliculosus-1a_F_contig11084.735.1|Name=mRNA_E-siliculosus-1a_F_contig11084.735.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=111bp
RAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQALVV
GGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKV
SEGWRAASLY*
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