prot_E-siliculosus-1a_F_contig11078.729.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11078.729.1
Unique Nameprot_E-siliculosus-1a_F_contig11078.729.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length108
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.340e-49
Identity = 104/171 (60.82%), Postives = 105/171 (61.40%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEE-----------------------EATASGS----------------------------------------SSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKREVE 108
            DAAIHNHLLALYAQEE                       E + SGS                                        SSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKR VE
Sbjct:  959 DAAIHNHLLALYAQEEQWREGHRHPSSPPSTRGYKALSGEGSVSGSGLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKRGVE 1129          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A7S4D8S2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8S2_HETAK)

HSP 1 Score: 108 bits (271), Expect = 4.830e-27
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0
Query:    3 AIHNHLLALYAQEEEATASGSSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKREVE 108
            A+HN+LL LYAQ           LL FI+ P  +  FD  YALRLC++  +  ACVH+Y  M LWEEAV+LAL+ DT++AK NANKAPD E RK LWL+IAK  ++
Sbjct:   10 ALHNYLLMLYAQSS--LPGSEEKLLKFISNP--QAAFDLKYALRLCTKESQHRACVHIYGMMTLWEEAVELALSFDTELAKENANKAPDRELRKRLWLQIAKHVID 111          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.010e-24
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   23 SSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKREV 107
            S+ LL  +ARPPE+RFFD  YALR+C+Q GR  A V +Y+AMGL+EEAVDLAL VD  +AKA+AN+  DP+TRK LWLKI +  V
Sbjct:  848 STPLLDLLARPPEKRFFDLTYALRVCAQLGRRRARVAIYAAMGLYEEAVDLALAVDAQLAKAHANRPKDPDTRKRLWLKIVRHAV 932          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A3M6T9G8_POCDA (Vacuolar protein sorting-associated protein 18 homolog n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6T9G8_POCDA)

HSP 1 Score: 106 bits (265), Expect = 1.370e-24
Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFI---ARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPET--RKLLWLKIAKREVE 108
            D AIHN+LL+LY ++E+       SLL ++    + PEE  +D  YALRLCS+H +  ACVH+YS MGL+EEAVDL+L VD D+AK  A K P+ +   RK LWL+IA+  VE
Sbjct:  655 DQAIHNYLLSLYIEQED-----DESLLRYLQMQGQDPEEVCYDMKYALRLCSEHDKQKACVHIYSTMGLFEEAVDLSLKVDVDLAKIQAQKPPEDDEVLRKKLWLRIARHVVE 762          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: UPI0009E26102 (vacuolar protein sorting-associated protein 18 homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E26102)

HSP 1 Score: 105 bits (261), Expect = 4.660e-24
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFI---ARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPET--RKLLWLKIAKREVE 108
            D AIHN+LL+LY ++++       SLL ++    + PEE  +D  YALRLCS+H +  ACVH+YS MGL+EEAVDL+L VD D+AK  A K P+ +   RK LWL+IA+  VE
Sbjct:  439 DQAIHNYLLSLYIEQDD-----DLSLLRYLQMQGQDPEEVCYDMKYALRLCSEHNKQQACVHIYSTMGLFEEAVDLSLKVDVDLAKIQAQKPPEDDEVLRKKLWLRIARHVVE 546          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: L8GL02_ACACA (Pep3/Vps18/deep orange family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL02_ACACA)

HSP 1 Score: 104 bits (259), Expect = 8.840e-24
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWLKIAKREVE 108
            D AIHN+LL+LYAQ+         +LL F+ R  EE  FD  YALRL  +H +  ACV +YSAMGL EEAVDLA+ +D ++AKA+AN+  D E RK LWL+IA+  VE
Sbjct:  633 DPAIHNYLLSLYAQQ-----GSEEALLGFLQR--EEAVFDLRYALRLALRHEKRRACVDIYSAMGLHEEAVDLAIRLDVNLAKAHANRPQDDEVRKKLWLRIARHVVE 733          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: UPI001CF40265 (vacuolar protein sorting-associated protein 18 homolog isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF40265)

HSP 1 Score: 102 bits (255), Expect = 3.070e-23
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFI---ARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPET--RKLLWLKIAKREVE 108
            D AIHN+LL+LY + ++       SLL ++    + PEE  +D  YALRLCS+H +  ACVH+YS MGL+EEAVDL+L VD ++AK  A K P+ +   RK LWL+IA+  VE
Sbjct:  667 DQAIHNYLLSLYIERDD-----DRSLLRYLQMQGQDPEEVCYDLKYALRLCSEHNKQRACVHIYSTMGLFEEAVDLSLKVDVELAKIQAQKPPEDDEVLRKKLWLRIARHVVE 774          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A397UPW1_9GLOM (Pep3/Vps18/deep orange family-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UPW1_9GLOM)

HSP 1 Score: 102 bits (253), Expect = 5.730e-23
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTV-DTDMAKANANKAPDPET-RKLLWLKIAKREV 107
            D AIHN LL LYA +  +  +  +SLL F+AR  +E  ++  YALR+CSQ+G++ +CVH+YS MGL+EEAVDLAL   D D+AK NA+K  D E  RK LWLKIA+ ++
Sbjct:  689 DPAIHNFLLTLYATQPSSN-NDETSLLKFLAREGKEPHYNMDYALRICSQNGKTQSCVHIYSNMGLFEEAVDLALKHNDLDLAKINADKPDDDEPLRKKLWLKIARLKI 796          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: A0A2R2MJ62_LINUN (Vacuolar protein sorting-associated protein 18 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MJ62_LINUN)

HSP 1 Score: 100 bits (250), Expect = 1.450e-22
Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFI---ARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDP-ETRKLLWLKIAKREVE 108
            D AIHN+LL+LYA+ +         L+A++       EE  +D  YALRLC++H +  ACVH+YS MGL+EEAVDLAL VD D+AK NA+K  D  E +K LWL+IA+  VE
Sbjct:  671 DEAIHNYLLSLYAKLQP------DKLMAYLKLEGEDQEEVSYDVKYALRLCAEHDQKRACVHIYSTMGLYEEAVDLALQVDVDLAKHNADKPEDDLELKKKLWLRIARHVVE 776          
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Match: UPI0003F0BFFE (vacuolar protein sorting-associated protein 18 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0BFFE)

HSP 1 Score: 100 bits (248), Expect = 2.700e-22
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    1 DAAIHNHLLALYAQEEEATASGSSSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPET-RKLLWLKIAKREVE 108
            D AIHN+LL+LYA+ ++         L F    P+   +D  YALRLCS+H    ACVH+Y+ MGL+EEAVDLAL VD D+AK NA++  D E  RK LWL+IA+  VE
Sbjct:  658 DEAIHNYLLSLYAKYQK---DQLMKYLMFQGNNPDMVHYDLKYALRLCSEHTIERACVHIYTTMGLYEEAVDLALKVDVDLAKLNADRPEDDEELRKKLWLRIARHVVE 763          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11078.729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQH0_9PHAE7.340e-4960.82Pep3_Vps18 domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S4D8S2_HETAK4.830e-2753.77Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CAW5_9STRA1.010e-2462.35Pep3_Vps18 domain-containing protein n=1 Tax=Tribo... [more]
A0A3M6T9G8_POCDA1.370e-2451.33Vacuolar protein sorting-associated protein 18 hom... [more]
UPI0009E261024.660e-2450.44vacuolar protein sorting-associated protein 18 hom... [more]
L8GL02_ACACA8.840e-2453.70Pep3/Vps18/deep orange family protein n=1 Tax=Acan... [more]
UPI001CF402653.070e-2349.56vacuolar protein sorting-associated protein 18 hom... [more]
A0A397UPW1_9GLOM5.730e-2353.21Pep3/Vps18/deep orange family-domain-containing pr... [more]
A0A2R2MJ62_LINUN1.450e-2250.89Vacuolar protein sorting-associated protein 18 hom... [more]
UPI0003F0BFFE2.700e-2251.38vacuolar protein sorting-associated protein 18 hom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23323VACUOLAR MEMBRANE PROTEIN RELATEDcoord: 1..107
NoneNo IPR availablePANTHERPTHR23323:SF26VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 18 HOMOLOGcoord: 1..107
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 1..108
score: 15.21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11078contigE-siliculosus-1a_F_contig11078:184..1577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11078.729.1mRNA_E-siliculosus-1a_F_contig11078.729.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11078 184..1577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11078.729.1 ID=prot_E-siliculosus-1a_F_contig11078.729.1|Name=mRNA_E-siliculosus-1a_F_contig11078.729.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=108bp
DAAIHNHLLALYAQEEEATASGSSSLLAFIARPPEERFFDPMYALRLCSQ
HGRSLACVHLYSAMGLWEEAVDLALTVDTDMAKANANKAPDPETRKLLWL
KIAKREVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat