prot_E-siliculosus-1a_F_contig1107.727.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1107.727.1
Unique Nameprot_E-siliculosus-1a_F_contig1107.727.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length212
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1107.727.1 vs. uniprot
Match: D8LHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD0_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.780e-25
Identity = 88/99 (88.89%), Postives = 88/99 (88.89%), Query Frame = 0 
Query:   45 SFPALHDTSTTHRHQLHRKRGGMGAGAPEDLSSTAAGPTGVSLGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDDPDLQYSSPAVLTGGVLRPTPQ 143
            S PALHD STT RHQLHRKRGGMG GAPEDLSSTAAG TGVSLG QGXXXXXXXXXXXXXXXXXXXXXXXXXX LPDDP LQY SPAV T GVLRPTPQ
Sbjct:   32 SSPALHDASTTQRHQLHRKRGGMGGGAPEDLSSTAAGGTGVSLGRQGXXXXXXXXXXXXXXXXXXXXXXXXXX-LPDDPGLQYRSPAVSTNGVLRPTPQ 129
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1107.727.1 vs. uniprot
Match: D8LHD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD3_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.540e-7
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    7 YLGDVSIVAMKMSDISRATEEQERMLVFYRNESDKCAS 44
            YLGDVSIVAM MSD SRATEEQ+RM  FYRNES KCAS
Sbjct:   10 YLGDVSIVAMMMSD-SRATEEQDRMWAFYRNESGKCAS 46
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1107.727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHD0_ECTSI1.780e-2588.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHD3_ECTSI3.540e-784.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1107contigE-siliculosus-1a_F_contig1107:25592..27824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1107.727.1mRNA_E-siliculosus-1a_F_contig1107.727.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1107 25300..33237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1107.727.1 ID=prot_E-siliculosus-1a_F_contig1107.727.1|Name=mRNA_E-siliculosus-1a_F_contig1107.727.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=212bp
MVARIVYLGDVSIVAMKMSDISRATEEQERMLVFYRNESDKCASSFPALH
DTSTTHRHQLHRKRGGMGAGAPEDLSSTAAGPTGVSLGHQGGGGGNKSSS
SGGGGDGPDVTTRTTTTTLPDDPDLQYSSPAVLTGGVLRPTPQLVILDRF
ATPPSTQAMNTLTERPQTSNSLSWVEAAVAAAAAAVAATAAAAAGPRESA
GAGQPRARWRA*
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