prot_E-siliculosus-1a_F_contig1106.721.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1106.721.1
Unique Nameprot_E-siliculosus-1a_F_contig1106.721.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length308
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Match: A0A6H5L4R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R6_9PHAE)

HSP 1 Score: 604 bits (1558), Expect = 2.600e-218
Identity = 294/307 (95.77%), Postives = 301/307 (98.05%), Query Frame = 0
Query:    1 MRAVLSLLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACDAGSLWVLALKHPKKLTQAFVSMLAPEPESMCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKGTALEVVETPIHVAGMQIATADDYCFDGARFRSCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVSFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 307
            MRAVL+LLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACDA +LW+LALKHPKKLTQAFVSMLAPEPE MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQL + GTALEVVETPIHVAGMQIAT DDYCFDGARFR+CNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREG+TARKGDCKNKGAARWGWRDGKLTQGGKHCLGRG DNKAIMVPCSEGHEHV+FVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE
Sbjct:    1 MRAVLTLLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACDASNLWILALKHPKKLTQAFVSMLAPEPERMCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQL-SSGTALEVVETPIHVAGMQIATVDDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGQTARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGSDNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 306          
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Match: D8LIW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW7_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 3.020e-100
Identity = 138/143 (96.50%), Postives = 142/143 (99.30%), Query Frame = 0
Query:  165 MQIATADDYCFDGARFRSCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVSFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 307
            MQIATADDYCFDGARFR+CNDGDPTLRWGIG+DFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHV+F+TPEIVPVG QQSMFGEQEKASTRRGATPRRFE
Sbjct:    1 MQIATADDYCFDGARFRTCNDGDPTLRWGIGIDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNFITPEIVPVGTQQSMFGEQEKASTRRGATPRRFE 143          
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Match: D8LIW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 7.210e-35
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query:   80 MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ 145
            MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ
Sbjct:    1 MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ 66          
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Match: A0A7S2P4G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4G1_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.380e-30
Identity = 99/280 (35.36%), Postives = 135/280 (48.21%), Query Frame = 0
Query:   24 NKDTTPFWLRDQLDGMCLGPDGFGACDAGSLWVLALKHPKKLTQAFVSMLAPEPESMCLG----SSSGGMFSSRRRVG-VSKCGSGNAK------NMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKGTA----------LEVVETPIHVAGMQIATADDYCFDGARFRSCNDGDPTLRWGIGMDF-RSTEPSRNLFYFFDREKCAVRE-GETARKGDCKNKGAARWGWRDGKLTQ-GGKHCLGRGRDNKAIMVPCSEGHEHVSFVTPEI 279
            N+  T F+LRD  DGMCLG  GF  C+  SLW+ A +   K   + V +L P+    CL       +GG  S R  +  V +  +GN        N    D+ V         Q K  L       +NSA M  C K T+          LEVVET +H  G  + +ADDYCFDG +FR C+  D    WGIG++F +  + SR L  F     C V +   +   G+C++    RWG ++GKL++  GK C+ R  DN A   PC+E  E   + TPEI
Sbjct:   32 NRGLTAFFLRDPTDGMCLGTHGFTECNTESLWLYASRGRNK-GHSLVLVLYPDFNGSCLSRLGPGVTGGPCSKRESMHWVIEGPNGNGHYRVKQTNTNAKDMCVARYKAATKKQSKELL-------KNSATMIPC-KPTSNKSEESGYVELEVVETAVHDVGFYLKSADDYCFDGLKFRECH-ADSNFLWGIGINFTKKGDLSRTLHKFHRPSSCLVEDHAGSLGLGNCESSKGQRWGLKEGKLSRDNGKICVVRKIDNAAATRPCTEAFE---YFTPEI 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Match: A0A7S2XYA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.930e-23
Identity = 69/181 (38.12%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    3 AVLSLLCMAVAVVGKKQEEALNKDT------TPFWLRDQLDGMCLGPDGFGACDAGSLWVLALKHPKKLTQAFVSMLAPEPESMCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKG-TALEVVETPIHVAGMQIATADDYCFD 176
            A ++ + M  +V  K  ++A  KD        PF+L+D LDG CLGP+GF ACD  SLW+LA    +K   + V++L PE    CLG+ SG        V  SKC +  AK+  + D    G       Q K CL R +   ++S  +Q C  G T L+VVET IH  G  + +AD  CFD
Sbjct:   15 AAVAYIAMLASVHAKGDQKAAAKDAYQNRGNVPFFLQDPLDGECLGPNGFTACDTTSLWILA---GRKEGHSLVALLEPEEGKSCLGTGSG------NSVKASKCSTKQAKHWKI-DADRHGYYVISTDQAKMCLFRSKDPYKSSVKLQPCKSGYTPLQVVETAIHDVGFFLESADGMCFD 185          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1106.721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L4R6_9PHAE2.600e-21895.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIW7_ECTSI3.020e-10096.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIW8_ECTSI7.210e-35100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2P4G1_9STRA1.380e-3035.36Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2XYA8_9STRA1.930e-2338.12Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.643

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1106contigE-siliculosus-1a_F_contig1106:5366..13469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1106.721.1mRNA_E-siliculosus-1a_F_contig1106.721.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1106 4526..13507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1106.721.1 ID=prot_E-siliculosus-1a_F_contig1106.721.1|Name=mRNA_E-siliculosus-1a_F_contig1106.721.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=308bp
MRAVLSLLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACD
AGSLWVLALKHPKKLTQAFVSMLAPEPESMCLGSSSGGMFSSRRRVGVSK
CGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKG
TALEVVETPIHVAGMQIATADDYCFDGARFRSCNDGDPTLRWGIGMDFRS
TEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKH
CLGRGRDNKAIMVPCSEGHEHVSFVTPEIVPVGMQQSMFGEQEKASTRRG
ATPRRFE*
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