prot_E-siliculosus-1a_F_contig11038.711.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11038.711.1
Unique Nameprot_E-siliculosus-1a_F_contig11038.711.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length309
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11038.711.1 vs. uniprot
Match: A0A6H5JFE7_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE7_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 9.070e-109
Identity = 231/316 (73.10%), Postives = 240/316 (75.95%), Query Frame = 0 
Query:    1 MRLGRIFTAAAKGKNPDPGTFYSVENAPDPLASSGAAGSSQPAYDGGYGGGDAGFDISNGYNGXXXXFTARAEGWREGGXPRXXXXXXXXXXXXXXXXXXASGSRDYEGEMGVGSGESEASFDGCLYSGSGGS--GGASFGVEKTFLAFDADDDSTGGGMGGSVGCRDDGFGGHGVASGGGDFCAHERGEVEEDEMLEPFAEKRSWPPQPPDLPFRAHDDGGVSCSSDPPGGCDDAIVGAISGISG------GSSLSDSHQRVPRNTDGRAGVRGDIGQRQEGEMMSRPDVLPERSFFGRRRAAEDDWRDPGAATP 308
            MRLGRIFTAAAKGKNPD GTFYSVENAPDPLASSGAAGSSQPAY GG     AGFDISNG+N     +TAR EGWREG X  XXXXXXXXXXXXXXXXXXASG R YEGEM V SGE EASFDG LYSGSGG   GGASFGVEKTF A+DADDDSTGGGMG SVG               G F A ER EV+  E+LEPFAEKRSWPPQPPD P RAHD GG + +  P GGCDDAIVG I+ ISG      GSSLSDSHQ VPRN D RA  RGDIGQ Q  E MSRP VLPERSFFGR+ AAEDDWRD GAATP
Sbjct:  534 MRLGRIFTAAAKGKNPDSGTFYSVENAPDPLASSGAAGSSQPAYGGGXXXXXAGFDISNGHNCGGGGYTAREEGWREGXXXXXXXXXXXXXXXXXXXXXXASGPRGYEGEMRVESGEREASFDGRLYSGSGGGCGGGASFGVEKTFCAYDADDDSTGGGMGRSVGRXXXXXXXXXXXXXXG-FRAQER-EVDGKEILEPFAEKRSWPPQPPDFPCRAHD-GGATSTCVPHGGCDDAIVGGITEISGIXXXXGGSSLSDSHQGVPRNMDDRARDRGDIGQGQGRETMSRPGVLPERSFFGRQGAAEDDWRDSGAATP 846
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11038.711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFE7_9PHAE9.070e-10973.10J domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11038contigE-siliculosus-1a_F_contig11038:68..994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11038.711.1mRNA_E-siliculosus-1a_F_contig11038.711.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11038 68..1351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11038.711.1 ID=prot_E-siliculosus-1a_F_contig11038.711.1|Name=mRNA_E-siliculosus-1a_F_contig11038.711.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=309bp
MRLGRIFTAAAKGKNPDPGTFYSVENAPDPLASSGAAGSSQPAYDGGYGG
GDAGFDISNGYNGGGGGFTARAEGWREGGGPRGGGGGDEGPPPPPPPPPP
ASGSRDYEGEMGVGSGESEASFDGCLYSGSGGSGGASFGVEKTFLAFDAD
DDSTGGGMGGSVGCRDDGFGGHGVASGGGDFCAHERGEVEEDEMLEPFAE
KRSWPPQPPDLPFRAHDDGGVSCSSDPPGGCDDAIVGAISGISGGSSLSD
SHQRVPRNTDGRAGVRGDIGQRQEGEMMSRPDVLPERSFFGRRRAAEDDW
RDPGAATP*
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