prot_E-siliculosus-1a_F_contig1100.695.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1100.695.1
Unique Nameprot_E-siliculosus-1a_F_contig1100.695.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length124
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1100.695.1 vs. uniprot
Match: D7FNK9_ECTSI (YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK9_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 5.700e-79
Identity = 116/123 (94.31%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    1 EKHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKARTAGLCVWSTISLERYVSVVGVKPHSGNL 123
            EKHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKK       VWSTISLERYVSVVGVKPHSGNL
Sbjct:    4 EKHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKEG-----VWSTISLERYVSVVGVKPHSGNL 121
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BLAST of mRNA_E-siliculosus-1a_F_contig1100.695.1 vs. uniprot
Match: A0A7S2V359_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V359_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.230e-33
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 0 
Query:    2 KHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKARTAGLCVWSTISLERYVSV-VGVKPHSG 121
            K L+ IHC+DD S    DGE  GGS KRM  Y  HK YQ ATANPE+P +I K++AGPL+ +   +MIGS F+V +T+EEA  F +NDPF KA      VW ++++ RYVS+  G+  H+G
Sbjct:   50 KQLWLIHCVDDDSSPLEDGETFGGSGKRMAVYAEHKVYQGATANPENPEYIRKLAAGPLLTDEGTHMIGSTFIVESTKEEAIAFNENDPFAKAG-----VWKSVNISRYVSIPAGLIAHAG 165
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1100.695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNK9_ECTSI5.700e-7994.31YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2V359_9STRA5.230e-3350.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1060coord: 4..113
e-value: 4.2E-8
score: 35.1
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 27..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1100contigE-siliculosus-1a_F_contig1100:1644..3194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1100.695.1mRNA_E-siliculosus-1a_F_contig1100.695.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1100 1644..3194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1100.695.1 ID=prot_E-siliculosus-1a_F_contig1100.695.1|Name=mRNA_E-siliculosus-1a_F_contig1100.695.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=124bp
EKHLYAIHCLDDQSCGKADGEPRGGSAKRMGNYPAHKEYQAATANPEDPR
FINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKKARTAGLC
VWSTISLERYVSVVGVKPHSGNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel