prot_E-siliculosus-1a_F_contig11.683.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11.683.1
Unique Nameprot_E-siliculosus-1a_F_contig11.683.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length237
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 2.120e-93
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0
Query:   99 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 236
            MLRTAGRAIHQ CRQRVPQASTP CVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA
Sbjct:    1 MLRTAGRAIHQHCRQRVPQASTPPCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 138          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A836CF79_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF79_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.800e-29
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 0
Query:  122 LCVRHFSA---GGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKL 233
            + V+H S    G G  + EL++ DDY +  ++K+VLYFTAKWCPPCRRI P   +L+ E   V F KVDID N+ AA+ A I SVPTF F+K G  +   +GAD  LLE+NV KL
Sbjct:   36 VLVKHLSGAAGGSGGTVKELASMDDYQSSSKDKAVLYFTAKWCPPCRRIAPMYQDLAAEKSDVHFYKVDIDVNKAAAKDAGIMSVPTFIFYKNGHMVSKFAGADYELLEENVDKL 150          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S2FY89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FY89_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.170e-25
Identity = 56/127 (44.09%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  115 VPQASTPLCVRHFSAGGGDRLV--ELSTKDDYVNFPRE-----KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLA 234
            +P+A  P   R     G  R V   L +  ++ +F         SV YFTA WC PC+RI P   ELS+  P ++F KVDID N+ AA  A IKSVPTF FFK G  +   SGAD  LLE+ ++K+A
Sbjct:    7 IPRALRPALQRASRTAGSTRSVVMTLESATEWESFQSAAMKDTNSVAYFTASWCGPCKRIAPIYEELSDSHPDITFAKVDIDQNQTAASKAAIKSVPTFMFFKDGNFVGQFSGADHQLLEETLSKMA 133          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A024U468_9STRA (Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U468_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.190e-23
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 0
Query:  118 ASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSM--SGADANLLEQNVAKL 233
            A++ + +  FS+  G  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  AELS     VSF KVD+D+ +  A +A ++S+PTF+F+  GQ   S+  SGAD NLL Q+VAKL
Sbjct:   11 ATSRVSIASFSSRAGASLVKELTEHAEYEQLIARPDAKSVVYFTASWCGPCKMISPVYAELSNMNTDVSFAKVDVDEMDHTAHVAGVRSMPTFQFYSNGQLQKSLGFSGADPNLLAQSVAKL 132          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S2UE67_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE67_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.310e-22
Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   99 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKL 233
            M   A  A+ Q  R    + ++    R   A      V LS +D    F     KSVLYFTA WCPPC+ I P   +LSE+   V+FGKVD+D N ++A    ++SVPTF  F G   +   SGADAN LE+ + KL
Sbjct:    1 MASVARIAMRQMSRSSTSKLASSSLTRRTMAS-----VTLSDEDAVEKFRSLNSKSVLYFTATWCPPCKAIAPIYEKLSEDYSDVAFGKVDVDANSDSALDFEVRSVPTFVLFDGETAVHKFSGADANQLEEEIKKL 132          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: W4H7J0_9STRA (Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7J0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.400e-22
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  113 QRVPQASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSM--SGADANLLEQNVAKL 233
            +R   A++   V  FS+ GG  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  A LS +   +SF KVD+D+ +  A +A ++S+PTF+F+  G+   S+  SGAD  LLE NV KL
Sbjct:   20 RRFAAATSRASVARFSSRGGASLVKELAEHAEYEQLIARPDAKSVVYFTAAWCGPCKMISPIYANLSNKNEDISFVKVDVDELDHTAHVAGVRSMPTFQFYANGKLQQSLGFSGADPTLLESNVNKL 146          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S3P7G5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7G5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.520e-21
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 0
Query:  118 ASTPLCVRH-----FSAGGGDRLVELSTKDDYVNFPRE--KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKL 233
            A+ PL VR      F++    ++  L   +D  NF ++  KSVLYFTA WCPPC++I P   ELS+ T  ++FG VD+DDN +AA    I +VPTF F  G + +   SGAD N L Q +  L
Sbjct:   10 AAAPLLVRRTTLRAFASVADHKVKTLEELEDVENFRKQNAKSVLYFTAVWCPPCKQIKPVYHELSKSTEKIAFGLVDVDDNGDAAVEFQISAVPTFIFSNGEKVLQRFSGADPNQLTQLLKDL 132          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A448YUQ9_9STRA (Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUQ9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.740e-20
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0
Query:  150 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 236
            EKS+LYFTA WCPPC+ I P   ELSE+   ++FGKVDIDD  +AA    I SVPTF FF G ++ +  +GA+ + LE  +  L EA
Sbjct:   20 EKSILYFTATWCPPCKIIKPVYEELSEKHENIAFGKVDIDDAYDAATEYQITSVPTFVFFNGNEKHEQFAGANQDKLESAIKDLDEA 106          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7R9WLB8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLB8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.330e-20
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0
Query:  135 LVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAE 235
            ++ LS  D    F   + KSVLYFTA WCPPC+ I     +LS+E   + FGKVD+DDN E A    I  VPTF  F  G+++   SGAD + L  +VAKL E
Sbjct:   26 VINLSDMDATTKFTDGQSKSVLYFTATWCPPCKMIKEPYEKLSDEFTEIGFGKVDVDDNSETAADYDITGVPTFILFNDGEQVGRFSGADIDKLSNSVAKLDE 128          
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A1E7F829_9STRA (Thioredoxin domain-containing protein n=3 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F829_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.350e-20
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  150 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF--KGGQEIDSMSGADANLLEQNVAKL 233
            EKS+LYFTA WCPPC+ I P    LS+E P +SFGK+DIDDN+++A    I SVPTF FF  KG ++    SGAD   L++ +  L
Sbjct:   53 EKSILYFTATWCPPCKLIKPVYESLSDEYPNISFGKIDIDDNQDSAMEYEISSVPTFLFFNGKGEKKYGQFSGADQEQLKKTLDDL 138          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL93_ECTSI2.120e-9398.55Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836CF79_9STRA2.800e-2951.30Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2FY89_9STRA9.170e-2544.09Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024U468_9STRA4.190e-2345.90Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157... [more]
A0A7S2UE67_9STRA2.310e-2240.88Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W4H7J0_9STRA9.400e-2243.31Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=11209... [more]
A0A7S3P7G5_9STRA2.520e-2143.09Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448YUQ9_9STRA1.740e-2051.72Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata ... [more]
A0A7R9WLB8_9STRA2.330e-2046.60Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1E7F829_9STRA2.350e-2052.33Thioredoxin domain-containing protein n=3 Tax=Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 135..236
e-value: 8.5E-27
score: 95.1
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 153..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 50..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 38..49
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 144..229
e-value: 1.6E-20
score: 73.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 116..235
score: 11.35
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 153..171
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 133..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11contigE-siliculosus-1a_F_contig11:74573..78766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11.683.1mRNA_E-siliculosus-1a_F_contig11.683.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11 73679..79099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11.683.1 ID=prot_E-siliculosus-1a_F_contig11.683.1|Name=mRNA_E-siliculosus-1a_F_contig11.683.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=237bp
MTRGRQSRANRRQHPRRGTRAAEQILKSSRFRSVRTRTPLFSAVGPLLLH
NRAANDTTRVTHPSQRERQREGEDRGRGTHERGWCIRTAIRGGQFEKTML
RTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPRE
KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHI
KSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain