mRNA_E-siliculosus-1a_F_contig11.683.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig11.683.1
Unique NamemRNA_E-siliculosus-1a_F_contig11.683.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 1.030e-87
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 1 
Query:  628 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 1041
            MLRTAGRAIHQ CRQRVPQASTP CVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA
Sbjct:    1 MLRTAGRAIHQHCRQRVPQASTPPCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 138
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A836CF79_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF79_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.190e-26
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1 
Query:  697 LCVRHFSA---GGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKL 1032
            + V+H S    G G  + EL++ DDY +  ++K+VLYFTAKWCPPCRRI P   +L+ E   V F KVDID N+ AA+ A I SVPTF F+K G  +   +GAD  LLE+NV KL
Sbjct:   36 VLVKHLSGAAGGSGGTVKELASMDDYQSSSKDKAVLYFTAKWCPPCRRIAPMYQDLAAEKSDVHFYKVDIDVNKAAAKDAGIMSVPTFIFYKNGHMVSKFAGADYELLEENVDKL 150
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S2FY89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FY89_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.420e-22
Identity = 56/127 (44.09%), Postives = 72/127 (56.69%), Query Frame = 1 
Query:  676 VPQASTPLCVRHFSAGGGDRLV--ELSTKDDYVNFPRE-----KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLA 1035
            +P+A  P   R     G  R V   L +  ++ +F         SV YFTA WC PC+RI P   ELS+  P ++F KVDID N+ AA  A IKSVPTF FFK G  +   SGAD  LLE+ ++K+A
Sbjct:    7 IPRALRPALQRASRTAGSTRSVVMTLESATEWESFQSAAMKDTNSVAYFTASWCGPCKRIAPIYEELSDSHPDITFAKVDIDQNQTAASKAAIKSVPTFMFFKDGNFVGQFSGADHQLLEETLSKMA 133
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BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A024U468_9STRA (Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U468_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.600e-21
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1 
Query:  685 ASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSM--SGADANLLEQNVAKL 1032
            A++ + +  FS+  G  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  AELS     VSF KVD+D+ +  A +A ++S+PTF+F+  GQ   S+  SGAD NLL Q+VAKL
Sbjct:   11 ATSRVSIASFSSRAGASLVKELTEHAEYEQLIARPDAKSVVYFTASWCGPCKMISPVYAELSNMNTDVSFAKVDVDEMDHTAHVAGVRSMPTFQFYSNGQLQKSLGFSGADPNLLAQSVAKL 132
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BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S2UE67_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE67_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.170e-20
Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 1 
Query:  628 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKL 1032
            M   A  A+ Q  R    + ++    R   A      V LS +D    F     KSVLYFTA WCPPC+ I P   +LSE+   V+FGKVD+D N ++A    ++SVPTF  F G   +   SGADAN LE+ + KL
Sbjct:    1 MASVARIAMRQMSRSSTSKLASSSLTRRTMAS-----VTLSDEDAVEKFRSLNSKSVLYFTATWCPPCKAIAPIYEKLSEDYSDVAFGKVDVDANSDSALDFEVRSVPTFVLFDGETAVHKFSGADANQLEEEIKKL 132
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BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: W4H7J0_9STRA (Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7J0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.130e-20
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 1 
Query:  670 QRVPQASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSM--SGADANLLEQNVAKL 1032
            +R   A++   V  FS+ GG  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  A LS +   +SF KVD+D+ +  A +A ++S+PTF+F+  G+   S+  SGAD  LLE NV KL
Sbjct:   20 RRFAAATSRASVARFSSRGGASLVKELAEHAEYEQLIARPDAKSVVYFTAAWCGPCKMISPIYANLSNKNEDISFVKVDVDELDHTAHVAGVRSMPTFQFYANGKLQQSLGFSGADPTLLESNVNKL 146
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7S3P7G5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7G5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.910e-19
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 1 
Query:  685 ASTPLCVRH-----FSAGGGDRLVELSTKDDYVNFPRE--KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQ 1017
            A+ PL VR      F++    ++  L   +D  NF ++  KSVLYFTA WCPPC++I P   ELS+ T  ++FG VD+DDN +AA    I +VPTF F  G + +   SGAD N L Q
Sbjct:   10 AAAPLLVRRTTLRAFASVADHKVKTLEELEDVENFRKQNAKSVLYFTAVWCPPCKQIKPVYHELSKSTEKIAFGLVDVDDNGDAAVEFQISAVPTFIFSNGEKVLQRFSGADPNQLTQ 127
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BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A448YUQ9_9STRA (Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUQ9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.010e-18
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1 
Query:  781 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 1041
            EKS+LYFTA WCPPC+ I P   ELSE+   ++FGKVDIDD  +AA    I SVPTF FF G ++ +  +GA+ + LE  +  L EA
Sbjct:   20 EKSILYFTATWCPPCKIIKPVYEELSEKHENIAFGKVDIDDAYDAATEYQITSVPTFVFFNGNEKHEQFAGANQDKLESAIKDLDEA 106
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A7R9WLB8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLB8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.420e-18
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 1 
Query:  736 LVELSTKDDYVNFP--REKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAE 1038
            ++ LS  D    F   + KSVLYFTA WCPPC+ I     +LS+E   + FGKVD+DDN E A    I  VPTF  F  G+++   SGAD + L  +VAKL E
Sbjct:   26 VINLSDMDATTKFTDGQSKSVLYFTATWCPPCKMIKEPYEKLSDEFTEIGFGKVDVDDNSETAADYDITGVPTFILFNDGEQVGRFSGADIDKLSNSVAKLDE 128
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Match: A0A1E7F829_9STRA (Thioredoxin domain-containing protein n=3 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F829_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.490e-18
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 1 
Query:  781 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF--KGGQEIDSMSGADANLLEQNVAKL 1032
            EKS+LYFTA WCPPC+ I P    LS+E P +SFGK+DIDDN+++A    I SVPTF FF  KG ++    SGAD   L++ +  L
Sbjct:   53 EKSILYFTATWCPPCKLIKPVYESLSDEYPNISFGKIDIDDNQDSAMEYEISSVPTFLFFNGKGEKKYGQFSGADQEQLKKTLDDL 138
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11.683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL93_ECTSI1.030e-8798.55Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836CF79_9STRA1.190e-2651.30Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2FY89_9STRA1.420e-2244.09Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024U468_9STRA4.600e-2145.90Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157... [more]
A0A7S2UE67_9STRA2.170e-2040.88Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W4H7J0_9STRA8.130e-2043.31Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=11209... [more]
A0A7S3P7G5_9STRA1.910e-1944.07Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448YUQ9_9STRA1.010e-1851.72Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata ... [more]
A0A7R9WLB8_9STRA1.420e-1846.60Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1E7F829_9STRA1.490e-1852.33Thioredoxin domain-containing protein n=3 Tax=Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11contigE-siliculosus-1a_F_contig11:73679..79099 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size711
Model size1938
Exons3
Ec32 orthologEc-15_004770.1
Ec32 ortholog descriptionthioredoxin O
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03110
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.CO
EggNOG OGsCOG0526@1,KOG0907@2759
EggNOG free text desc.cell redox homeostasis
KEGG Pathwayko04621,ko05418,map04621,map05418
KEGG koko:K03671
Preferred nametxn
Seed eggNOG ortholog2880.D7FL93
Seed ortholog evalue6.5e-72
Seed ortholog score277.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11.683.1prot_E-siliculosus-1a_F_contig11.683.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig11 74573..78766 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927602.7808087-UTR-E-siliculosus-1a_F_contig11:73678..745721622927602.7808087-UTR-E-siliculosus-1a_F_contig11:73678..74572Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig11 73679..74572 -
1696318606.6668797-UTR-E-siliculosus-1a_F_contig11:73678..745721696318606.6668797-UTR-E-siliculosus-1a_F_contig11:73678..74572Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig11 73679..74572 -
1622927602.8901966-UTR-E-siliculosus-1a_F_contig11:78766..790991622927602.8901966-UTR-E-siliculosus-1a_F_contig11:78766..79099Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig11 78767..79099 -
1696318606.7059915-UTR-E-siliculosus-1a_F_contig11:78766..790991696318606.7059915-UTR-E-siliculosus-1a_F_contig11:78766..79099Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig11 78767..79099 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927602.836315-CDS-E-siliculosus-1a_F_contig11:74572..746531622927602.836315-CDS-E-siliculosus-1a_F_contig11:74572..74653Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 74573..74653 -
1696318606.675999-CDS-E-siliculosus-1a_F_contig11:74572..746531696318606.675999-CDS-E-siliculosus-1a_F_contig11:74572..74653Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 74573..74653 -
1622927602.8574667-CDS-E-siliculosus-1a_F_contig11:76010..761941622927602.8574667-CDS-E-siliculosus-1a_F_contig11:76010..76194Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 76011..76194 -
1696318606.6869762-CDS-E-siliculosus-1a_F_contig11:76010..761941696318606.6869762-CDS-E-siliculosus-1a_F_contig11:76010..76194Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 76011..76194 -
1622927602.8737175-CDS-E-siliculosus-1a_F_contig11:78320..787661622927602.8737175-CDS-E-siliculosus-1a_F_contig11:78320..78766Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 78321..78766 -
1696318606.6963737-CDS-E-siliculosus-1a_F_contig11:78320..787661696318606.6963737-CDS-E-siliculosus-1a_F_contig11:78320..78766Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11 78321..78766 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig11.683.1

>prot_E-siliculosus-1a_F_contig11.683.1 ID=prot_E-siliculosus-1a_F_contig11.683.1|Name=mRNA_E-siliculosus-1a_F_contig11.683.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=237bp
MTRGRQSRANRRQHPRRGTRAAEQILKSSRFRSVRTRTPLFSAVGPLLLH
NRAANDTTRVTHPSQRERQREGEDRGRGTHERGWCIRTAIRGGQFEKTML
RTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPRE
KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHI
KSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA*
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mRNA from alignment at E-siliculosus-1a_F_contig11:73679..79099-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig11.683.1 ID=mRNA_E-siliculosus-1a_F_contig11.683.1|Name=mRNA_E-siliculosus-1a_F_contig11.683.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5421bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11:73679..79099- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACGGCCGAGGATGCAGAAGAGCTGAGAGCCGCATGAGGCACAATCCGCAC
GCAGAAGTGGACACCAACAGAGCGCTACTATACCGACAGGCAGAAGGCTG
ATGAGCCCTTCGTCACTCTACCCTGTTCCATTGGTGGGCCCATGACTCCA
CATGCCATGACCGAGTGAGCGAGAGCGTGTGCATCCGGTGTGTTTGTCTC
CTGCTGCGCTCGCCGGCGGTTCGTACTGACACGTCATTCCTCTCTTCTTG
GTCTTGCTCCTGTGTGGGCCCGACCGCAGTGTCCGGACAAACCATAGAAT
GAAGTCTGGCTCCGGAGTTGGTTAGACGACGCGATGACACGAGGCAGGCA
GAGCAGAGCGAACAGGAGACAGCACCCACGGCGCGGAACAAGAGCTGCGG
AACAAATTCTCAAATCGTCCCGCTTCCGCAGTGTTCGCACACGTACCCCA
TTGTTTTCAGCAGTGGGGCCCCTCCTCCTCCACAACCGCGCTGCAAACGA
CACAACCAGAGTGACACACCCGTCCCAGCGAGAGCGGCAGAGAGAAGGAG
AAGACCGGGGGCGAGGAACGCACGAGAGAGGCTGGTGCATTCGGACTGCA
ATCAGAGGGGGGCAATTCGAAAAAACAATGCTTCGCACAGCAGGTCGAGC
AATCCATCAGCAGTGCCGCCAGCGGGTGCCACAGGCGTCGACGCCGCTGT
GTGTGCGACATTTTTCTGCGGGTGGGGGAGACCGGCTTGTAGAGCTCAGC
ACGAAAGACGACTACGTCAACTTTCCCAGGTGATGTTTTGTTCTGGTGCA
AGGACAACCGTGACGTAGGTGCATAGAGACATAGAGACATGACAACGACT
GCTTGTGTGCCGAATCCAGAACTCCGAATTTTATACGGTACGAAAAACGC
TCCGCTTCCCGCAGCTCGCAGCCTTCCCTCTCTTCCTTCTTCCTTCCGCC
GCAGCTGCCTGCATCTCTGCGCTTCCGCAGTACAGCTGAGGTATGTAGGG
CCTCAACGTACCAGGGGGCGCTCTATGATACGTTGTTTAGTGTGTAGTGC
CAGCAGGTTGTTTGGTACAATAGCAAGAAGAAGAGGAGAAGGACGACCCT
CTAATCATTCACGTCAGGCACAGCCACACCGCCGTGTGGCACGGTGTGCC
AGGGGCACCGGCGTGGCGAGACGGTGGAATATCCATAGTCTAGTATGCAT
ACAACGTTTGTGTTGAACCTCATCTCACCTTACACCCATACCGTGCGAGG
GGGAGAGAAAAAACACGTGAAGTGGAAACGATCGGCGGATAGATAATTTT
CATGTGACTGCTGTTTATATTGGAGGCTTGGGTAGAACCCTTCACCCATT
CGACTAATACAGAAAAATGTTCGTGTTTTTTGTCCCGCTACAAGGACTAG
GACTGGTGTATTTCCATTGGTAAGCGCGGTCATGCTAGTTAACAAGGCCA
ACACACAGGACAGGAGAGAGACAAAGGGAGAGAGAGGGAGAGACAAAGAG
ACAGAGAGGCAGCGGAGGGAAGAGAGAACGATAACGACACACCGACCAAC
CGGCTAGGCACAGAGAGCGAGAGAGAGCGAGAGAGAGCAGAAACAGGGTG
CACCGCCAGACCGTCTTTGGGCGGGCTGCGTTAGCCTTTCTTTTTGTCTG
TCTGTCCTGTTGAACATACGTGTGGGCTCGGGCTGGCGTGTCTTTTCCTA
CATTTGTTCTGCCGCCTCTCTAACTACTTGCAGGTCCTGCGTTGCACGCA
GGGAGAAGTCAGCCAAATTGCGCGTGTGCCGTGCAGGTACCAACCATCGC
ATCCGAACCAGAGCTCACCCTCCTTGTCGACTCGGGTGCTGTCTCGAACG
AGTGCAGTGCTTGTATGCCTATTTTTGCACGTATTTTCTGAAACCAAAAC
TTGTCGTTGGCTGTGACACTTATTCGTAGAGCGGTTCATCTGCTTCCCAG
CTGCTCTAGAACCGTTTCACCGAAAATGTTGACTGGAAAACCCACCTTCC
GCGGATGCACGCTCGCGTGTGCGTGTTTTTTTGCACGTCACGCACACCCT
ATAATAGCCGCGATTAACCCTGACAACTCGAGCAAGTGCGAGTGAGCGAT
GGGACGTCGTCCTGGCTCTGACGGCTTCTTTCTTGCTTGCGTCTCTTGAT
ATCTCCTCATCTACATTTTTGCCTCCCTTGTGGCGGTTCTCTGCTCGAGC
CTATGTGCTGCTGACTGCTTGCTGGACTGCTCATGTATATGTGATCCTTG
TCCAGCTAATCAGGGATATAAGCACGATGGTCAAGGATCACATATACACA
AGAACAATTCAAGAAAATGCACATGGCGCCGCCTCACGGGGTCCCAAATC
GTGGCCTTTAGAAAGGCCTTCTATTTTCAGCCACACTGATGTACAGCAAG
ACTGACTTGTTTTCGTTGGTCTGCCGATAGCGCGAAATACGCTAGTTGTA
AAGACACTCACACGACATTGCTCCAGCACACTGGCGTGCGATTTCGCTAA
GGAATGACGTGGTGCACGATTTAGACGAAGCTAATAATCCCGCCTGCAGG
TCTCGTAGCTCACATACAGACACAGCAGTTGGTTGCCGGCGCCGTTCTAC
ACATTTCACCACGTCCTGCAAACTGAAAGGCCACATGTTGGCTCACACCC
GTGCTCTCGGATCGCTCTACTACAAAACATGCAAAGGTAGGCTCATCTTT
GCTTGCCGCCTGCCTCCTACACAAGTAGTTTTTCCACATGAACAATGACA
CACATCGTTGGACAACAAACAACTGAACCGCACAACACAGCAGTGCTGCA
TGCCACGTTTGTTCTCTTCTATTCGTACTCCGTATGTGCCAGGTACACTT
GGTGTTGATGCTTGTGTTTTCGATTCCCACCCCCCTCCTTGATTTCCGTT
GGCAGAGAGAAGAGCGTCCTTTACTTTACGGCAAAGTGGTGCCCGCCGTG
CCGAAGGATTGGTCCGTTCTTGGCAGAGCTGAGCGAGGAGACTCCGGCGG
TTTCATTTGGGAAGGTTGACATCGACGACAACGAGGAGGCGGCGCAAATG
GCCCACATCAAGTCGGTGCCAACTTTTAAGTTCTTCAAGGCAAGCAAACA
GCAGCAGCAGCAGCAGCAGCAGTAACTAAGTTTGAGTTGGGGGCCGTTTG
CACGCATTGCTATTTTGTACCAAGGAGGCAAGGAGGTCATCTTATGGAGG
AACATGTTGAGAACCGAAATGGTAGCTTTTTCCGGAGCACCGAGAATGAG
CTTCGAGCAGGGTGGAACAAACCGTCCGAATAATGGGAATACTGTCGCAA
GAGTAGTTCCTTTCTGCATTGTGTTTCGTGTGCCAGAAATCAAGATCATG
TCCTATTTAGAGCTGTTCTTTAGCTTCCCGTGTATTCTGCTGGTTGTTGG
TGTGCTTCCGAAGCAATCGATACATCTCTCGCCAAGTGCGTACCGCAAGG
CGAACGCACTCGTTCATTAGCGGTTTGTAGCTCGTTGGACTTGGGCGAAA
AATATTTTTTCTTGAGTCTAGCGCGATTTGTCGTTGTGATGATTGTATGT
GTACTGTTGTGGATACACCTGTGTTTGCTTCTGCACGCTTTGGCTGTAAG
TGGCACCCCTATAGTACATCCATGTCACGGGGAGGGGAGGGGTCAATCGC
CAAATTCTCAGCAAGGCGCTATTTGGTTGTTCTCACTTTGCTCCCAACCG
GCTTGCAACATGTGCACACGGCATGGACAGAACCATCGTGTCATTCCTTA
GTCCTTCCACTTCTCCAACTACATCGAAGCCTTTGCGGCCCGACTTGCGC
ATGATGTTGCACCCGCTCTAGACATTATTTGTTCGCGTCGTTTGGTTGGC
AATATCGAACAATGTTACAATGCATCAAATATCACAACACACATCTTCCG
ATACTTCGGCTTAGTTTTGTGTTGGTGTATTCTGGCTGCCTGCGGTTGGG
GATGAATAAAATAGTAAAACCGCTCTTGTTCTTAGCACCAACTGGCATCA
CTGATAACGCAGTGTTAGGCTGACACAAACTCAAAATAAGCCAAGTCTCC
AGTCGGTTCCAGTCCACTTACTGCAAAGACTTCACCACATCCCTTTCGAC
TGAGGTTATATCTCGAACGGGTAGTCTTTCTGTCAGGTCATGTTTACTTT
CTAAAAATCGCTACGGCCTCTTAACCAGGTGATGTTGTCGTGGTTTTTGA
AACAGTGTGGGTTCCTCACTAGTGCCGACAGGGGCCCGCCAGATTCACCG
GCACTGACGGTACCGGCCAGTTGCTCCGAATCATCCGGCACATTGCGGAA
CCCCCAACTAAATTTTTTCTGTCTAATGTACCATGTGCGTGAAAATGACG
CTCTTCTTCGCACGAAACAATACCATATGGCATTCTTCTTCCATGCTGAT
CCACGGATTTATCTGCGCATGTACCATGGTGTGTGCTTTGTCGCAGGGGG
GACAGGAGATCGACAGCATGTCAGGGGCGGACGCAAATTTGTTGGAGCAG
AACGTGGCCAAGCTTGCTGAAGCATGATACCTGAGGGTGTAGCGGCTACA
AGATGGTGTTGGTCCAATGAATGGACTTCGAAGAATGGATTGTTGGAACC
GTGTGCAACCTTGAACGGAGCGAGCGTATCCGAGCACGGGCATGACACCG
CTCGTGCCGTTTTGTGATCGGGGTTGAGAAGAAACTCCTAGCTCCGTCGA
AGCAGTCGGGGCAATTTTATCAACGAGTGGCAACGGTTTGGGTTGTTGGG
CGGGCCAGGACTCGATTTGGCTACGGTCTCGCCAGATGCGACCTTTGTGC
AACGTGCCGAACGAATTGGATGCTCCTGTTGGATCAAAGGAAGTGGAGTC
GAGCATGGTTGGTCGTTTGCATAAGCATGCCCGTGTTTATTTTTCAGTGC
TCCCCCCCTCGTAAAACATTATCTCTCCTGTGCGAGTGCTGCACACCAAT
TAACGTGTTACACGTCGTACAACACCGGGGTCCACGATGTTGTCTGGCAG
TGGAGAGTGCAGAGATGCGGTGCCGTGTGATACTGGGCCGACACCGCTGA
AATCGGCTCCAGCTCCGGTGCGAATGTACTTTGCGCTCGGCACTCGCGGT
CATTTTTTGAGGAGGCCAGTGCTGGAGCAGCTACAGCAGTTACACTGCTT
TTCTTTTTTTTTTATATGGACAATACGAAGTTACCAGCTTGCCTCATGGG
GTAATGCAAGCCAACACTTTGTGAACACTTTGTCGACTCGTTGTGATCGA
TGACGTCAGAAGGCGGTTACACTCGTTTGGCCTCAAAATTCGAAGTTGAA
CTACGATGAGGTCGGTCCCGTGTTCGTTCTGTGTTTCTTTGTCTGCATCC
GACGTGTTACGCGCATGCGGCAGCAAGATTCCTGAAGAGCCTAGGAACAC
GATAAGAGAAATGGAAATTCG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11:73679..79099-

>mRNA_E-siliculosus-1a_F_contig11.683.1 ID=mRNA_E-siliculosus-1a_F_contig11.683.1|Name=mRNA_E-siliculosus-1a_F_contig11.683.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11:73679..79099- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACACGAGGCAGGCAGAGCAGAGCGAACAGGAGACAGCACCCACGGCG
CGGAACAAGAGCTGCGGAACAAATTCTCAAATCGTCCCGCTTCCGCAGTG
TTCGCACACGTACCCCATTGTTTTCAGCAGTGGGGCCCCTCCTCCTCCAC
AACCGCGCTGCAAACGACACAACCAGAGTGACACACCCGTCCCAGCGAGA
GCGGCAGAGAGAAGGAGAAGACCGGGGGCGAGGAACGCACGAGAGAGGCT
GGTGCATTCGGACTGCAATCAGAGGGGGGCAATTCGAAAAAACAATGCTT
CGCACAGCAGGTCGAGCAATCCATCAGCAGTGCCGCCAGCGGGTGCCACA
GGCGTCGACGCCGCTGTGTGTGCGACATTTTTCTGCGGGTGGGGGAGACC
GGCTTGTAGAGCTCAGCACGAAAGACGACTACGTCAACTTTCCCAGATGA
CACGAGGCAGGCAGAGCAGAGCGAACAGGAGACAGCACCCACGGCGCGGA
ACAAGAGCTGCGGAACAAATTCTCAAATCGTCCCGCTTCCGCAGTGTTCG
CACACGTACCCCATTGTTTTCAGCAGTGGGGCCCCTCCTCCTCCACAACC
GCGCTGCAAACGACACAACCAGAGTGACACACCCGTCCCAGCGAGAGCGG
CAGAGAGAAGGAGAAGACCGGGGGCGAGGAACGCACGAGAGAGGCTGGTG
CATTCGGACTGCAATCAGAGGGGGGCAATTCGAAAAAACAATGCTTCGCA
CAGCAGGTCGAGCAATCCATCAGCAGTGCCGCCAGCGGGTGCCACAGGCG
TCGACGCCGCTGTGTGTGCGACATTTTTCTGCGGGTGGGGGAGACCGGCT
TGTAGAGCTCAGCACGAAAGACGACTACGTCAACTTTCCCAGAGAGAAGA
GCGTCCTTTACTTTACGGCAAAGTGGTGCCCGCCGTGCCGAAGGATTGGT
CCGTTCTTGGCAGAGCTGAGCGAGGAGACTCCGGCGGTTTCATTTGGGAA
GGTTGACATCGACGACAACGAGGAGGCGGCGCAAATGGCCCACATCAAGT
CGGTGCCAACTTTTAAGTTCTTCAAGAGAGAAGAGCGTCCTTTACTTTAC
GGCAAAGTGGTGCCCGCCGTGCCGAAGGATTGGTCCGTTCTTGGCAGAGC
TGAGCGAGGAGACTCCGGCGGTTTCATTTGGGAAGGTTGACATCGACGAC
AACGAGGAGGCGGCGCAAATGGCCCACATCAAGTCGGTGCCAACTTTTAA
GTTCTTCAAGGGGGGACAGGAGATCGACAGCATGTCAGGGGCGGACGCAA
ATTTGTTGGAGCAGAACGTGGCCAAGCTTGCTGAAGCATGAGGGGGACAG
GAGATCGACAGCATGTCAGGGGCGGACGCAAATTTGTTGGAGCAGAACGT
GGCCAAGCTTGCTGAAGCATGA
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