prot_E-siliculosus-1a_F_contig10986.672.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10986.672.1
Unique Nameprot_E-siliculosus-1a_F_contig10986.672.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length75
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10986.672.1 vs. uniprot
Match: D7FHF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 3.890e-40
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:    1 SGAKPLALSDVSLIDEALGRSLGSVAELAHEVEEAKAALGGEGSGVKAAVRSMSELEEYAENLCLSWTLPGYPW 74
            +GAKPLALSDV LIDEALGRSLGSVAELA EVEEAKAALGGEGSGVKAAVRSMSELEEYAENLCLSWTLPGYPW
Sbjct:   43 AGAKPLALSDVGLIDEALGRSLGSVAELAREVEEAKAALGGEGSGVKAAVRSMSELEEYAENLCLSWTLPGYPW 116
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10986.672.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.280e-34
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:    1 SGAKPLALSDVSLIDEALGRSLGSVAELAHEVEEAKAALGGEGSGVKAAVRSMSELEEYAENLCLSWTLPGYPW 74
            +GAKPLALSDVSLIDEALGRSLGSVAELA +VEEAKAALGG GSGVKAAV+SMSELEEYAENLCLSWTLPGYPW
Sbjct: 2087 AGAKPLALSDVSLIDEALGRSLGSVAELAQQVEEAKAALGGVGSGVKAAVQSMSELEEYAENLCLSWTLPGYPW 2160
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10986.672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHF1_ECTSI3.890e-4095.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2P5_9PHAE1.280e-3493.24HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10986contigE-siliculosus-1a_F_contig10986:103..1248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10986.672.1mRNA_E-siliculosus-1a_F_contig10986.672.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10986 103..1248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10986.672.1 ID=prot_E-siliculosus-1a_F_contig10986.672.1|Name=mRNA_E-siliculosus-1a_F_contig10986.672.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=75bp
SGAKPLALSDVSLIDEALGRSLGSVAELAHEVEEAKAALGGEGSGVKAAV
RSMSELEEYAENLCLSWTLPGYPW*
back to top