prot_E-siliculosus-1a_F_contig1097.669.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1097.669.1
Unique Nameprot_E-siliculosus-1a_F_contig1097.669.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length194
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1097.669.1 vs. uniprot
Match: A0A6H5LG67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG67_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 9.620e-83
Identity = 129/205 (62.93%), Postives = 138/205 (67.32%), Query Frame = 0
Query:   30 DASRKTWLRCKETDFGPRTLFGGEKYNAWDMHASLSQPKATGSRISRPFVCFFCRTDIGPGVQYFRLPDPTGKSNGDSTQK----------------------------------------IHYIHGDGSECVGKEVPEDNTAPCAGCDRADVVLHGVMGVGKPQYFYCTRCAYTKRADINNDVQEFSEIKRLERVNGRTPSTPI 194
            DASRKT L+CKETDFGP TLF GEK NA DMH SLSQPK  G    R FVCF+CRTDIG GVQYFRLPDPTGK N D TQK                                        IHYIHGDGS CVGK+VPEDNTAPCAGCD  DVVLH +MG+ K +YFYC+ CAYTKRADI  DVQEFSEIKRLER+NG TPSTP+
Sbjct:    4 DASRKTCLQCKETDFGPGTLFRGEKCNACDMHVSLSQPKRKG----RAFVCFYCRTDIGEGVQYFRLPDPTGKVNLDGTQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIHYIHGDGSHCVGKDVPEDNTAPCAGCDSDDVVLHDMMGLRKTEYFYCSPCAYTKRADIITDVQEFSEIKRLERMNGGTPSTPL 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1097.669.1 vs. uniprot
Match: D8LGB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB1_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 1.000e-78
Identity = 127/195 (65.13%), Postives = 136/195 (69.74%), Query Frame = 0
Query:    1 MPSTTSKAWGAIVDEHENQPGQLPKFTAGDASRKTWLRCKETDFGPRTLFGGEKYNAWDMHASLSQPKATGSRISRPFVCFFCRTDIGPGVQYFRLP-DPTGKSNGDSTQKIHYIHGDGSECVGKEVPEDNTAPCAGCDRADVVLHGVMGVGKPQYFYCTRCAYTKRADINNDVQEFSEIKRLERVNGRTPSTPI 194
            MPS  SKAWG I DEHENQPGQLPKFTA DASRKT    +     PR    G +      HA ++QP     R   P +C F    + P     R P  P  K+NGDSTQKIHYIHGDGSECVGKEVPEDNT PCAG  RADVVLHG MG GKPQYFYCTRCAYTKRA IN DVQEFSEIKRLER+NGRTPST +
Sbjct:    1 MPSKPSKAWGPIFDEHENQPGQLPKFTADDASRKTLAPVQGNGLRPRHALPGREIQRV-RHACVAQPAEADWRQEVPPLCVF----LLPDRHRSRCPVHPADKTNGDSTQKIHYIHGDGSECVGKEVPEDNTVPCAGRVRADVVLHG-MGAGKPQYFYCTRCAYTKRAAINIDVQEFSEIKRLERMNGRTPSTTV 189          
BLAST of mRNA_E-siliculosus-1a_F_contig1097.669.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.020e-23
Identity = 66/192 (34.38%), Postives = 96/192 (50.00%), Query Frame = 0
Query:    4 TTSKAWGAIVDEHENQPGQLPKFTAGDASRKTWLRCKETDFGPRTLFGGEKYNAWDMHA-----SLSQPKAT---GSRISRPFVCFFCRTDIGPGVQYFRLPDPTGKSNGDSTQ-KIHYIHGDGSECVGKEVPEDNTAPCAG-CDRA--DVVLHGVMGVGKPQYFYCTRCAYTKRADINNDVQEFSEIKRLE 183
            T ++ W A  ++ E    ++       A     +RC   D   +    G+K   W M       S+S P+     G + ++PF CFFCR  IG    Y R+P P G  N  + Q +  Y+H DG+ CVGK VP D  APCAG C ++  D  L+ +MG+G   YF+C  C Y +RA +   VQE   ++RL+
Sbjct:   10 TDAEMWAAFSEDAELF-SEVVSLQDSHARGLCCIRCGLMDDFQQP---GDK--GWGMRGCSESFSVSAPEEANNGGKKFAKPFKCFFCRGVIGYSTPYLRMPHPLGGVNAWNNQPRFVYLHTDGASCVGKTVPTDTKAPCAGHCGKSSPDHSLYDMMGIGNDTYFFCDDCKYKRRAGVLGGVQELLLLRRLQ 195          
BLAST of mRNA_E-siliculosus-1a_F_contig1097.669.1 vs. uniprot
Match: D8LGB0_ECTSI (NAD dependent epimerase/dehydratase, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.880e-8
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
Query:  154 QYFYCTRCAYTKRADINNDVQEFSEIKRLER 184
            +YFYCTRCAYTKRA IN DVQEFSEIKRLER
Sbjct:  420 KYFYCTRCAYTKRAAINIDVQEFSEIKRLER 450          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1097.669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LG67_9PHAE9.620e-8362.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGB1_ECTSI1.000e-7865.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPV6_9PHAE1.020e-2334.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGB0_ECTSI4.880e-890.32NAD dependent epimerase/dehydratase, putative (Par... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1097contigE-siliculosus-1a_F_contig1097:35042..36084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1097.669.1mRNA_E-siliculosus-1a_F_contig1097.669.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1097 35042..36084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1097.669.1 ID=prot_E-siliculosus-1a_F_contig1097.669.1|Name=mRNA_E-siliculosus-1a_F_contig1097.669.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=194bp
MPSTTSKAWGAIVDEHENQPGQLPKFTAGDASRKTWLRCKETDFGPRTLF
GGEKYNAWDMHASLSQPKATGSRISRPFVCFFCRTDIGPGVQYFRLPDPT
GKSNGDSTQKIHYIHGDGSECVGKEVPEDNTAPCAGCDRADVVLHGVMGV
GKPQYFYCTRCAYTKRADINNDVQEFSEIKRLERVNGRTPSTPI
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