prot_E-siliculosus-1a_F_contig1097.666.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1097.666.1
Unique Nameprot_E-siliculosus-1a_F_contig1097.666.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length942
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 667 bits (1722), Expect = 3.900e-230
Identity = 413/536 (77.05%), Postives = 422/536 (78.73%), Query Frame = 0 
Query:  409 MQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSSIN--KTSHNHNAHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX---------------YDGRDYGGGAYSLSPSGGLTGYGMASYGYGYGGQPASPKMDGLGREKRRDRVRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEV 921
            MQSMQSPYGGYWPSGDVSGY  MSTGIST+GGGYGASDSGVRDTASTTSSIN  K +HNH+ HHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX               YDGRDYGGG                                          VRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTL+EIDGNVFRMSKDQ+   LLQLKLDQGDP+FVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXX                                       S DEAV LVNVP+GKV      AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP +
Sbjct:    1 MQSMQSPYGGYWPSGDVSGYGAMSTGISTFGGGYGASDSGVRDTASTTSSININKANHNHSIHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXXXXXXXXXXXXXXXAAYDGRDYGGG------------------------------------------VRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLEEIDGNVFRMSKDQVSV-LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPSI 493
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB4_ECTSI)

HSP 1 Score: 575 bits (1483), Expect = 2.380e-193
Identity = 446/528 (84.47%), Postives = 455/528 (86.17%), Query Frame = 0 
Query:    1 MVLSADVESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGIQIDGGVAGQQTNPNNNNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGLAGPGVAFGDXXXXXXXXXXXXXXXXXXXXXXXXXRGXXXXXXXXXXX-----YEPAAAAAASPVRGPVDHAQLQQALSHMGYGGGGNDTMSPTSATXXXXXXXXXXXXXXXXXXXPGLYSTGSNDSNHSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMNHPQNVAAAGGGYPSSPGHSASYGMQPSQQMGTIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTMQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSSINKTSHNHNAHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX--YDGRDYGGG 521
            MVLSAD ESDMSKNVSVATGGIAATGGGGGAPAGPKA+GV+AIQGKLAGIQIDGGVAGQQTNPN+NNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         DG+GVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGL GPGVAFGD        XXXX       X       XXXXXXXXXXX     YE AAAAAASPVRGPVDH+QLQ ALSHMGYG             XXXXXXXXXXXXXXXXXXX            HSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHM+HPQNVAAAGGGYPSSPGHSASYGMQP+QQMG IEMQQGMPSGYPVGAGGMVHSMGVVPGTPT+QSMQSPYGGYWPSGDVSGYSGMSTGIS YGGGYGASDSGVRDTASTTSSINKTSHNH+ HHYLASPGGSVAGPPSGQRAVGDQYGG RQHQ  XXXXXXXXXX  YDGRDYGGG
Sbjct:    1 MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKADGVNAIQGKLAGIQIDGGVAGQQTNPNSNNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTT-----DGSGVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGLTGPGVAFGDDRRRAGGAXXXXVGGRRAAXGSGSGMXXXXXXXXXXXXXXRGGYESAAAAAASPVRGPVDHSQLQ-ALSHMGYG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMSHPQNVAAAGGGYPSSPGHSASYGMQPNQQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTLQSMQSPYGGYWPSGDVSGYSGMSTGISAYGGGYGASDSGVRDTASTTSSINKTSHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGTRQHQHQXXXXXXXXXXAAYDGRDYGGG 517
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 7.050e-133
Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 0 
Query:  536 MASYGYGYGGQPASPKMDGLGREKRRDRVRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 743
            MASYGYGYGG PASPKMDGLGREKRRDRVRSGSIVSM GGAGFGSGG+PQRETELSVAMENLTL+EI+GNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF
Sbjct:    1 MASYGYGYGGHPASPKMDGLGREKRRDRVRSGSIVSMAGGAGFGSGGEPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 208
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A4D9CTA7_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.060e-64
Identity = 178/349 (51.00%), Postives = 238/349 (68.19%), Query Frame = 0 
Query:  585 QRETELSVAMENLT--LDEI--DGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDVPA 929
            +R+ ++  A+ + T  L+EI     V  +S+DQ+GCR LQLKLD+      + I  +A+P ++EMM DPFGNYLFQKI DK  E  R  +++ V  ++V   +NLHGTRSVQ+I+EVC+ T  QVA + +AL+   V LC+D NGNHVVQR LQHL   D AF                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + DE   + + P+G++  LS+QK+SSNV+EKC+++ASE++   Y+ E+  P  ++ L+QDQYANYV+Q+ L +A     L LVE++R HL  MRN++GGRR+L++I+KRFP V L  D+ A
Sbjct:  792 ERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGADAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCK-TKDQVATITAALRHDVVRLCVDANGNHVVQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMA 1139
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB6_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 3.730e-61
Identity = 112/116 (96.55%), Postives = 112/116 (96.55%), Query Frame = 0 
Query:  809 SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLD 924
            SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP    D
Sbjct:   63 SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPVARKD 178
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 221 bits (562), Expect = 6.670e-59
Identity = 139/381 (36.48%), Postives = 192/381 (50.39%), Query Frame = 0 
Query:  581 GGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLD---QGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVC-------------------------------RGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 927
            GG     + LS A   L++D+I   VF MSKDQ GCRLLQ +LD   +GD   V  I  E+  +L+EMM DPFGNYLFQK+ ++V E  R  ++ +V+  +V A +NLHGTRSVQK++EVC                               R T S   ++V ALKD  V LC+D+NGNHV+QR LQ + P  N F                                                                 + +EA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQDQ+ANYV+Q+ L +   +  L LV++IR HL  M+N+SGGRR+  RI KRFP + +  D+
Sbjct:   65 GGSATDPSSLSAA---LSVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDV--IYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 9.690e-59
Identity = 140/358 (39.11%), Postives = 187/358 (52.23%), Query Frame = 0 
Query:  586 RETELSVAMENL--TLDEIDGNVFRMSKDQIGCRLLQLKLDQ--------------GDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 927
            RE++++  +E     L ++ G V+ MS+DQ+GCRLLQ KLD+               +   VS I  EA P LS MM DPFGNYLFQK+  KVD+  R   V  V  +M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N F                                                                 SR+E   L + P+G VA LS QKFSSNV+E C++RA  E+  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  366 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 722
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.560e-58
Identity = 131/336 (38.99%), Postives = 180/336 (53.57%), Query Frame = 0 
Query:  597 LTLDEIDGNVFRMSKDQIGCRLLQLKLD-QGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP---EVSLDEDVP 928
            L ++++ G V+ MSKDQ GCRLLQ +LD  G P     I  EA P+L +MM DPFGNYLFQK+ ++V +D R ++V +V+  +V A +NLHGTRSVQK++EVC    +   ++V AL+   V LC+D+NGNHV+QR LQ L    N F                                                                   DE V L+    G V  LS+QKFSSNV+EKC++ A  E+   +V E+     M  +LQDQ+ANYV+Q+ L +A  +  L LV +I+ HL  M+N+SGGRR+  RI KRFP   E+++D D P
Sbjct:  253 LAVEDLQGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFPHMVEMAMDLDPP 588
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 8.020e-58
Identity = 141/358 (39.39%), Postives = 188/358 (52.51%), Query Frame = 0 
Query:  586 RETELSVAMENL--TLDEIDGNVFRMSKDQIGCRLLQLKLDQ--------------GDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 927
            RE++++  +E     L ++ G V+ MS+DQ+GCRLLQ KLD+               +   VS I  EA P LS MM DPFGNYLFQK+  KVD+  R   V  VA +M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N F                                                                 SR+E   L + P+G VA LS QKFSSNV+E C++RA  E+  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  754 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVADRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 1110
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.690e-58
Identity = 148/442 (33.48%), Postives = 217/442 (49.10%), Query Frame = 0 
Query:  536 MASYGYGYGGQPASPKMDGL---GREKRRDRVRS-----GSIVSMG----GGAGFGS---GGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKIC-GEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVA----------------------------------VVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 927
            M  + +  GG     +M+G    GR++ R   RS     G+ + +G    GG G  +   GG     + LS A   L++++I   VF MSKDQ GCRLLQ +LD  D   + ++   E+  +L+EMM DPFGNYLFQK+ ++V+E  R  ++ +V+  +V A +NLHGTRSVQK++EVC  +P  +                                   ++V ALKD  V LC+D+NGNHV+QR LQ + P  N F                                                                 + +EA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQDQ+ANYV+Q+ L +   +  L LV++IR HL  M+N+SGGRR+  RI KRFP + +  D+
Sbjct:  230 MQQHRHPMGGDELGHQMNGQYGGGRQQSRMGYRSNDGAGGNSLGLGAMNSGGGGMSAPMMGGATADASSLSAA---LSVEDIQNRVFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISVDM 668
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3P5_9PHAE3.900e-23077.05PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGB4_ECTSI2.380e-19384.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGB5_ECTSI7.050e-13397.60PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A4D9CTA7_9STRA2.060e-6451.00PUM-HD domain-containing protein n=2 Tax=Monodopsi... [more]
D8LGB6_ECTSI3.730e-6196.55PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A833SFT8_PHYIN6.670e-5936.48Pumilio-family RNA binding repeat domain-containin... [more]
D7FSX6_ECTSI9.690e-5939.11PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YPP5_9STRA1.560e-5838.99Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6H5JG61_9PHAE8.020e-5839.39PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A662WKH4_9STRA9.690e-5833.48Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 783..818
e-value: 6.4E-5
score: 32.3
coord: 747..782
e-value: 0.0081
score: 25.4
coord: 819..854
e-value: 14.0
score: 11.8
coord: 711..746
e-value: 1.4E-4
score: 31.3
coord: 673..710
e-value: 170.0
score: 3.4
coord: 637..672
e-value: 0.039
score: 23.1
coord: 857..892
e-value: 1.6
score: 17.8
coord: 601..636
e-value: 0.02
score: 24.1
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 752..780
e-value: 2.1E-4
score: 20.8
coord: 784..810
e-value: 1.7E-6
score: 27.4
coord: 712..740
e-value: 2.6E-5
score: 23.7
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 746..782
score: 9.201
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 819..854
score: 6.331
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 673..710
score: 6.937
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 855..892
score: 9.061
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 637..672
score: 8.617
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 711..734
score: 6.867
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 601..636
score: 6.844
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 783..818
score: 10.39
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 586..922
e-value: 5.7E-102
score: 343.2
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 253..911
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 253..911
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 580..918
score: 85.108
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 594..915

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1097contigE-siliculosus-1a_F_contig1097:2636..16246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1097.666.1mRNA_E-siliculosus-1a_F_contig1097.666.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1097 2322..17526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1097.666.1 ID=prot_E-siliculosus-1a_F_contig1097.666.1|Name=mRNA_E-siliculosus-1a_F_contig1097.666.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=942bp
MVLSADVESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGI
QIDGGVAGQQTNPNNNNYFGYGPSGGLALDVDGGGGGGGGGGGAPTQGVA
APSSTAGGSGGVTAGGGGGGMGGSHTTGGTTDGNGVSRRFGVPIASSSRN
GGAGGNTRGGGGGGGGGVSGLAGPGVAFGDDRRRAGGAAGGGVGGRRAGG
GGGGGRGSGGRASGSRGGYEPAAAAAASPVRGPVDHAQLQQALSHMGYGG
GGNDTMSPTSATGMGGQAQQQQQQQQHQQQQPGLYSTGSNDSNHSGGMGQ
PVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMNHPQN
VAAAGGGYPSSPGHSASYGMQPSQQMGTIEMQQGMPSGYPVGAGGMVHSM
GVVPGTPTMQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVR
DTASTTSSINKTSHNHNAHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQ
QPQHQQQQHQAAYDGRDYGGGAYSLSPSGGLTGYGMASYGYGYGGQPASP
KMDGLGREKRRDRVRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLD
EIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPF
GNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRG
TPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFEMLAE
ACVPVATHRHGCCVIQRAIDAATVEQSRLLVSQVSKHALQLMQDPYGNYV
VQYVLGICSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIV
KYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVL
MRNSSGGRRMLTRISKRFPEVSLDEDVPAIAVVRAPAGVEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR033133PUM-HD
IPR011989ARM-like
IPR001313Pumilio_RNA-bd_rpt