mRNA_E-siliculosus-1a_F_contig1097.666.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE) HSP 1 Score: 667 bits (1722), Expect = 6.020e-228 Identity = 413/536 (77.05%), Postives = 422/536 (78.73%), Query Frame = 1 Query: 1399 MQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSSIN--KTSHNHNAHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX---------------YDGRDYGGGAYSLSPSGGLTGYGMASYGYGYGGQPASPKMDGLGREKRRDRVRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEV 2937
MQSMQSPYGGYWPSGDVSGY MSTGIST+GGGYGASDSGVRDTASTTSSIN K +HNH+ HHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX YDGRDYGGG VRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTL+EIDGNVFRMSKDQ+ LLQLKLDQGDP+FVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXX S DEAV LVNVP+GKV AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP +
Sbjct: 1 MQSMQSPYGGYWPSGDVSGYGAMSTGISTFGGGYGASDSGVRDTASTTSSININKANHNHSIHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXXXXXXXXXXXXXXXAAYDGRDYGGG------------------------------------------VRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLEEIDGNVFRMSKDQVSV-LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPSI 493
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB4_ECTSI) HSP 1 Score: 577 bits (1486), Expect = 9.200e-192 Identity = 446/528 (84.47%), Postives = 455/528 (86.17%), Query Frame = 1 Query: 175 MVLSADVESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGIQIDGGVAGQQTNPNNNNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGLAGPGVAFGDXXXXXXXXXXXXXXXXXXXXXXXXXRGXXXXXXXXXXX-----YEPAAAAAASPVRGPVDHAQLQQALSHMGYGGGGNDTMSPTSATXXXXXXXXXXXXXXXXXXXPGLYSTGSNDSNHSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMNHPQNVAAAGGGYPSSPGHSASYGMQPSQQMGTIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTMQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSSINKTSHNHNAHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXX--YDGRDYGGG 1737
MVLSAD ESDMSKNVSVATGGIAATGGGGGAPAGPKA+GV+AIQGKLAGIQIDGGVAGQQTNPN+NNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG+GVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGL GPGVAFGD XXXX X XXXXXXXXXXX YE AAAAAASPVRGPVDH+QLQ ALSHMGYG XXXXXXXXXXXXXXXXXXX HSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHM+HPQNVAAAGGGYPSSPGHSASYGMQP+QQMG IEMQQGMPSGYPVGAGGMVHSMGVVPGTPT+QSMQSPYGGYWPSGDVSGYSGMSTGIS YGGGYGASDSGVRDTASTTSSINKTSHNH+ HHYLASPGGSVAGPPSGQRAVGDQYGG RQHQ XXXXXXXXXX YDGRDYGGG
Sbjct: 1 MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKADGVNAIQGKLAGIQIDGGVAGQQTNPNSNNYFGYGPSGGLALDVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTT-----DGSGVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGLTGPGVAFGDDRRRAGGAXXXXVGGRRAAXGSGSGMXXXXXXXXXXXXXXRGGYESAAAAAASPVRGPVDHSQLQ-ALSHMGYG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMSHPQNVAAAGGGYPSSPGHSASYGMQPNQQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTLQSMQSPYGGYWPSGDVSGYSGMSTGISAYGGGYGASDSGVRDTASTTSSINKTSHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGTRQHQHQXXXXXXXXXXAAYDGRDYGGG 517
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 2.700e-131 Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 1 Query: 1780 MASYGYGYGGQPASPKMDGLGREKRRDRVRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 2403
MASYGYGYGG PASPKMDGLGREKRRDRVRSGSIVSM GGAGFGSGG+PQRETELSVAMENLTL+EI+GNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF
Sbjct: 1 MASYGYGYGGHPASPKMDGLGREKRRDRVRSGSIVSMAGGAGFGSGGEPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 208
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A4D9CTA7_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.030e-63 Identity = 178/349 (51.00%), Postives = 238/349 (68.19%), Query Frame = 1 Query: 1927 QRETELSVAMENLT--LDEI--DGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDVPA 2961
+R+ ++ A+ + T L+EI V +S+DQ+GCR LQLKLD+ + I +A+P ++EMM DPFGNYLFQKI DK E R +++ V ++V +NLHGTRSVQ+I+EVC+ T QVA + +AL+ V LC+D NGNHVVQR LQHL D AF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + DE + + P+G++ LS+QK+SSNV+EKC+++ASE++ Y+ E+ P ++ L+QDQYANYV+Q+ L +A L LVE++R HL MRN++GGRR+L++I+KRFP V L D+ A
Sbjct: 792 ERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGADAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCK-TKDQVATITAALRHDVVRLCVDANGNHVVQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMA 1139
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D8LGB6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB6_ECTSI) HSP 1 Score: 215 bits (548), Expect = 9.130e-61 Identity = 112/116 (96.55%), Postives = 112/116 (96.55%), Query Frame = 1 Query: 2599 SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLD 2946
SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP D
Sbjct: 63 SRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPVARKD 178
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN) HSP 1 Score: 221 bits (562), Expect = 1.850e-58 Identity = 139/381 (36.48%), Postives = 192/381 (50.39%), Query Frame = 1 Query: 1915 GGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLD---QGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVC-------------------------------RGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 2955
GG + LS A L++D+I VF MSKDQ GCRLLQ +LD +GD V I E+ +L+EMM DPFGNYLFQK+ ++V E R ++ +V+ +V A +NLHGTRSVQK++EVC R T S ++V ALKD V LC+D+NGNHV+QR LQ + P N F + +EA ++ P+G + LS+QKFSSNVIEKC+++A E + KY+ E+ M +LQDQ+ANYV+Q+ L + + L LV++IR HL M+N+SGGRR+ RI KRFP + + D+
Sbjct: 65 GGSATDPSSLSAA---LSVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDV--IYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.980e-58 Identity = 140/358 (39.11%), Postives = 187/358 (52.23%), Query Frame = 1 Query: 1930 RETELSVAMENL--TLDEIDGNVFRMSKDQIGCRLLQLKLDQ--------------GDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 2955
RE++++ +E L ++ G V+ MS+DQ+GCRLLQ KLD+ + VS I EA P LS MM DPFGNYLFQK+ KVD+ R V V +M EA +NLHGTR VQK++E+CR T +Q AV+ +L + V L LD NGNHVVQR LQH+ N F SR+E L + P+G VA LS QKFSSNV+E C++RA E+ K+V ELA +R L+ DQYANYV+Q+ L +A + L LV +IR HL M+++S GRR+ +I KR+P V L E++
Sbjct: 366 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 722
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA) HSP 1 Score: 221 bits (564), Expect = 4.420e-58 Identity = 131/336 (38.99%), Postives = 180/336 (53.57%), Query Frame = 1 Query: 1963 LTLDEIDGNVFRMSKDQIGCRLLQLKLD-QGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP---EVSLDEDVP 2958
L ++++ G V+ MSKDQ GCRLLQ +LD G P I EA P+L +MM DPFGNYLFQK+ ++V +D R ++V +V+ +V A +NLHGTRSVQK++EVC + ++V AL+ V LC+D+NGNHV+QR LQ L N F DE V L+ G V LS+QKFSSNV+EKC++ A E+ +V E+ M +LQDQ+ANYV+Q+ L +A + L LV +I+ HL M+N+SGGRR+ RI KRFP E+++D D P
Sbjct: 253 LAVEDLQGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFPHMVEMAMDLDPP 588
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE) HSP 1 Score: 227 bits (578), Expect = 2.780e-57 Identity = 141/358 (39.39%), Postives = 188/358 (52.51%), Query Frame = 1 Query: 1930 RETELSVAMENL--TLDEIDGNVFRMSKDQIGCRLLQLKLDQ--------------GDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 2955
RE++++ +E L ++ G V+ MS+DQ+GCRLLQ KLD+ + VS I EA P LS MM DPFGNYLFQK+ KVD+ R V VA +M EA +NLHGTR VQK++E+CR T +Q AV+ +L + V L LD NGNHVVQR LQH+ N F SR+E L + P+G VA LS QKFSSNV+E C++RA E+ K+V ELA +R L+ DQYANYV+Q+ L +A + L LV +IR HL M+++S GRR+ +I KR+P V L E++
Sbjct: 754 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVADRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 1110
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.870e-57 Identity = 148/442 (33.48%), Postives = 217/442 (49.10%), Query Frame = 1 Query: 1780 MASYGYGYGGQPASPKMDGL---GREKRRDRVRS-----GSIVSMG----GGAGFGS---GGDPQRETELSVAMENLTLDEIDGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKIC-GEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVA----------------------------------VVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 2955
M + + GG +M+G GR++ R RS G+ + +G GG G + GG + LS A L++++I VF MSKDQ GCRLLQ +LD D + ++ E+ +L+EMM DPFGNYLFQK+ ++V+E R ++ +V+ +V A +NLHGTRSVQK++EVC +P + ++V ALKD V LC+D+NGNHV+QR LQ + P N F + +EA ++ P+G + LS+QKFSSNVIEKC+++A E + KY+ E+ M +LQDQ+ANYV+Q+ L + + L LV++IR HL M+N+SGGRR+ RI KRFP + + D+
Sbjct: 230 MQQHRHPMGGDELGHQMNGQYGGGRQQSRMGYRSNDGAGGNSLGLGAMNSGGGGMSAPMMGGATADASSLSAA---LSVEDIQNRVFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISVDM 668 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1097.666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1097.666.1 >prot_E-siliculosus-1a_F_contig1097.666.1 ID=prot_E-siliculosus-1a_F_contig1097.666.1|Name=mRNA_E-siliculosus-1a_F_contig1097.666.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=942bp MVLSADVESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGIback to top mRNA from alignment at E-siliculosus-1a_F_contig1097:2322..17526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1097.666.1 ID=mRNA_E-siliculosus-1a_F_contig1097.666.1|Name=mRNA_E-siliculosus-1a_F_contig1097.666.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=15205bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1097:2322..17526- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1097:2322..17526- >mRNA_E-siliculosus-1a_F_contig1097.666.1 ID=mRNA_E-siliculosus-1a_F_contig1097.666.1|Name=mRNA_E-siliculosus-1a_F_contig1097.666.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5652bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1097:2322..17526- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |