prot_E-siliculosus-1a_F_contig1094.653.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.653.1
Unique Nameprot_E-siliculosus-1a_F_contig1094.653.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length374
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 8.070e-206
Identity = 330/351 (94.02%), Postives = 331/351 (94.30%), Query Frame = 0
Query:   27 AGGTKAILATANRTERGQRLRAVNWVKQVRNELTSAEFALNLNGATRGTSTGXXXXXX---VPPGINGQSTSPGAPSSXXXXXXXXXXXXSGTKSEIDFETIAERLEASLRALQEGRPLSLLEAISPDELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAGGEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVMLELRAIGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 374
            AGGTKAILATANRTERGQRLRAVNWVKQVRNELTSAEFALNLNGATRG STGXXXXXX    PPGINGQSTSPGAPSS             G+KSEIDFETIAERLEASLRALQ GRPLSLLEAISPDELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAGGEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKN KEIPEDSAVMLELRAIGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ
Sbjct:   29 AGGTKAILATANRTERGQRLRAVNWVKQVRNELTSAEFALNLNGATRGMSTGXXXXXXXXXTPPGINGQSTSPGAPSSSAAPAGAGATP--GSKSEIDFETIAERLEASLRALQAGRPLSLLEAISPDELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAGGEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNIKEIPEDSAVMLELRAIGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 377          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 1.960e-186
Identity = 316/377 (83.82%), Postives = 322/377 (85.41%), Query Frame = 0
Query:   27 AGGTKAILATANRTERGQRLRAVNWVKQ---------------------VRNELTSAEFALNLNGATRGTSTGXXXXXX-----VPPGINGQSTSPGAPSSXXXXXXXXXXXXSGTKSEIDFETIAERLEASLRALQEGRPLSLLEAISPDELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAG---GEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVMLELRAIGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 374
            AGGT AILATANRTERGQRLRAVNWVKQ                     VRNELTSAEFALNLNGATRG ST  XXXXX      PPGINGQS SPGAPS              G+KSEIDFETIAERLEASLRALQ GRP+SLLEAISPDELREITARLK NLTKIKKITQAEGRSRDGTGGDSAG RSAG AG   GEEGSSWRDAGGILGEMTEG+NVNLKDVKVPEF+LFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDE+GGLAAGGSHGGG KNTKEIPEDSAVMLELRAIGEELEGRQEQL+RELDALKAEARAQEATWKTLERRKA RRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ
Sbjct:  187 AGGTNAILATANRTERGQRLRAVNWVKQGAAFMPLMGAACDGRASLSRQVRNELTSAEFALNLNGATRGMSTDGXXXXXXXXXXTPPGINGQSASPGAPS--FSAAPAGATATPGSKSEIDFETIAERLEASLRALQAGRPMSLLEAISPDELREITARLKANLTKIKKITQAEGRSRDGTGGDSAGTRSAGAAGAAGGEEGSSWRDAGGILGEMTEGMNVNLKDVKVPEFNLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEQGGLAAGGSHGGGHKNTKEIPEDSAVMLELRAIGEELEGRQEQLQRELDALKAEARAQEATWKTLERRKAIRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 561          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A835YNT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.610e-31
Identity = 100/262 (38.17%), Postives = 134/262 (51.15%), Query Frame = 0
Query:   34 LATANRTERGQRLRAVNWVKQVRNELTSAEFALNLNGATRGTSTGXXXXXXVPPGINGQSTSPGAPSSXXXXXXXXXXXXSGTKSEIDFETIAERLEASLRALQEGR--PLSLLEAISPDELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAGGEEGSSWRDAG-------------------GILGEMTEGINVNLKDVK-----VPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEE 269
            +  A+RTERGQ+LRA+NWVKQVRN+LTSAEFAL L+    G  +         PG+  +  S                        ID+++IA RLE++LR + EGR   L L +A++ +EL E+ ARL   ++ +      + +  D    +  G R   E   +E +   D                     G   ++  G +      K      PEF LFVRDDGTVDWDGAIQSGREVARFG+ELW+RINGQ+P EE
Sbjct:    3 MTAASRTERGQKLRALNWVKQVRNDLTSAEFALQLDQGLSGAESRGAGGKV--PGLRRKWRS------------------------IDYDSIAVRLESNLRLINEGRVRSLGLDKAVTEEELAELQARLVKTMSDVSAAIVKQDQVDD----EERGLRK--EKFKQEQALHADTAPVEATNFAVTAPAKVAPPNGSSAQLVNGASAADAPQKGGAKLTPEFGLFVRDDGTVDWDGAIQSGREVARFGKELWERINGQDPVEE 232          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A7S1NU99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU99_9EUGL)

HSP 1 Score: 83.2 bits (204), Expect = 1.280e-13
Identity = 99/344 (28.78%), Postives = 156/344 (45.35%), Query Frame = 0
Query:   41 ERGQRLRAVNWVKQVRNELTSAEFALNLNGATRGTSTGXXXXXXVPPGINGQSTSPGAPSSXXXXXXXXXXXXSGTKSEIDFETIAERLEASLRALQEGRPLSLLEAISPDELREITARLKVN----LTKIKKITQAEGRSRDGTG---GDSAGARSAGEAGGEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVM---LELRAIGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 374
            +R QRL+ + WVK+V+++LT AEFAL +N + R            PPG   +    G                      ID+  IA++L++SL A  E +   L++    + L+      K N    + K+ ++ Q      D +G   G      +AG+A  E   + +                    K    +LFVRDDGTVDWDGA++SG+E+A FGQE+WDR+NG+  D    L          +N      D  ++    EL A+ +ELE    Q R    A+  EAR    T + +   +A   +++  + +    +++ L  +D+DMERIC  +EQ
Sbjct:  241 DRLQRLKELAWVKEVKDDLTYAEFALTINPSIRRNH---------PPGYKIRRKVTG----------------------IDYFKIADKLDSSL-ARMERKKTWLIDVTEINALKARLRNTKKNVDELIVKMHELEQQADSEEDESGKKDGKEGTPSAAGKA--EVDGTDKSKXXXXXXXXXXXXXXXXXDKPLRLELFVRDDGTVDWDGAMESGKELAVFGQEVWDRLNGRTEDGYRSLP---------ENLFASDTDPLILKTKAELEALEQELETTT-QARNAKQAVLWEART---TGEPVSN-EARVELKALAQSVLELRRRVALQRLDLDMERICLYLEQ 536          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A7S4DP72_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DP72_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 3.660e-8
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  228 FDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVMLELRAIGEELEGRQEQL 312
            F L VR+DGTVDWDG I+ GREVA+FGQ+LW R+N ++  +E      G+ G  +     I ++S  + EL    ++++ R +QL
Sbjct:  130 FRLIVREDGTVDWDGVIEGGREVAQFGQDLWQRLNAKSSQDELSSMMMGAQGERELALNNIIQNSQKVKELNDKIQQIQHRVDQL 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.640e-8
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 0
Query:  230 LFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVMLELRAIGEELEGRQEQLRRELDALKAEARAQEATW-KTLERRKANRR------------IRSKQEQLDNATKQLQLHNIDVDMERICYNIEQ 374
            +FVR+DGTVDWDGA QSG+E+A++  E+ +R+ G++P EE   A          +T     DS+  ++L             L+R L  L++E RA E    K LE  KA R+            +R  ++Q     ++++L  +D+DMER C  IEQ
Sbjct:  379 VFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKSPGEEAPPAKA--------STSLATIDSSPGMQL-------------LQRYLQELESELRAAEDERDKILELHKALRKQNLDVSKAQKGELRIAEDQAVEMKRRVELQRLDMDMERACAYIEQ 515          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: K0RSL1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RSL1_THAOC)

HSP 1 Score: 64.3 bits (155), Expect = 1.460e-7
Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 0
Query:  230 LFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDE---EGGLAAGGS-HGGGDKNTKEIPEDSAVML---ELRAIGEELEGRQEQ----LRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIE 373
            L+VRDDGT+DWDGA+Q    + +FG  +W RING++P+E   +GG+++    H  G   T +IPE  A+     +L  + +EL   + +    L   L A +A A    AT   + R K    IR+  +QLD    ++    ++ ++ERI   +E
Sbjct:  277 LYVRDDGTIDWDGALQDREALKKFGSAVWSRINGRDPEEGGDDGGVSSADEFHSSGKAVTAKIPETVAIREKKDQLDRLKKELNEMETEHTKLLNSALSAGQAVANVNFATIDPILRVK----IRTSLDQLDKKRAEVSFQMLNYELERIYTYLE 427          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A1Z5JMY9_FISSO (LETM1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMY9_FISSO)

HSP 1 Score: 62.0 bits (149), Expect = 9.070e-7
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
Query:  213 TEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPD 267
            T   N   KD K  + +L+VRDDGTVDWDGA+Q    + +FG+ +W RING++PD
Sbjct:  257 TTETNAREKDSKTNDPNLYVRDDGTVDWDGALQDQAALRKFGKAVWARINGRDPD 311          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: A0A7S2A4H7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4H7_TRICV)

HSP 1 Score: 60.1 bits (144), Expect = 3.280e-6
Identity = 49/162 (30.25%), Postives = 83/162 (51.23%), Query Frame = 0
Query:  227 EFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAV---MLELRAIGEELEGRQEQLRRELD------------ALKAEARAQEATWKTLERRKANRRIRSKQEQLDNATKQLQLHNIDVDMERICYNIE 373
            + +L++RDDGT+DWDGAIQ    + +FG  +W RING +P+  G  +        ++  K+  E+  V   ++E  AI +E + R ++LR ELD            A+KA +        +L+  K    IRS  E L+   +++    ++ ++ERI   +E
Sbjct:  129 DMNLYIRDDGTIDWDGAIQDRAAIKKFGSSVWARINGVDPESIGDES--------ERELKKEEEEKKVTVKIVETEAIRKE-KARLDELRAELDKTQANHTALLNSAVKAGSAVANVNLASLDP-KLRAEIRSSAEALEKKQEEVSFQMLNYELERIFTYLE 280          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Match: B8C2L4_THAPS (LETM1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2L4_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 7.810e-6
Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = 0
Query:  207 GILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEEGGLAA--GGSHGGGDKNTKEIPEDSAVMLELRAIGE 303
            G  G  TE    N      P   L+VR+DGT+DWDGA+Q    + +FG  +W RINGQ+P+  G  +   GG+   GD         +A ++E  AI E
Sbjct:  280 GGKGNNTEATATNTATTFDPS--LYVREDGTIDWDGALQDREALKKFGSAVWSRINGQDPETSGDASEEEGGALTAGDDFHSPSKAVTAKIVETDAIRE 376          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LP03_ECTSI8.070e-20694.02LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LQ87_9PHAE1.960e-18683.82LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YNT1_9STRA8.610e-3138.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1NU99_9EUGL1.280e-1328.78Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4DP72_9EUKA3.660e-841.18Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A4D9D1V1_9STRA9.640e-834.18LETM1 domain-containing protein n=1 Tax=Nannochlor... [more]
K0RSL1_THAOC1.460e-733.55Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5JMY9_FISSO9.070e-750.91LETM1 domain-containing protein n=2 Tax=Fistulifer... [more]
A0A7S2A4H7_TRICV3.280e-630.25Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8C2L4_THAPS7.810e-637.37LETM1 domain-containing protein n=1 Tax=Thalassios... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:32836..37240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.653.1mRNA_E-siliculosus-1a_F_contig1094.653.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1094 32836..37240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1094.653.1 ID=prot_E-siliculosus-1a_F_contig1094.653.1|Name=mRNA_E-siliculosus-1a_F_contig1094.653.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=374bp
GGGGGGGGGGGGGGGGAGEAAAAPAPAGGTKAILATANRTERGQRLRAVN
WVKQVRNELTSAEFALNLNGATRGTSTGGGGGGGVPPGINGQSTSPGAPS
SSAAPAPAAATATSGTKSEIDFETIAERLEASLRALQEGRPLSLLEAISP
DELREITARLKVNLTKIKKITQAEGRSRDGTGGDSAGARSAGEAGGEEGS
SWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREV
ARFGQELWDRINGQNPDEEGGLAAGGSHGGGDKNTKEIPEDSAVMLELRA
IGEELEGRQEQLRRELDALKAEARAQEATWKTLERRKANRRIRSKQEQLD
NATKQLQLHNIDVDMERICYNIEQ
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