prot_E-siliculosus-1a_F_contig1092.636.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1092.636.1
Unique Nameprot_E-siliculosus-1a_F_contig1092.636.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length79
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.636.1 vs. uniprot
Match: D7FHU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU7_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 8.460e-47
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:    1 MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAGWHRTEGGGT 78
            MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAGWHRTEGGGT
Sbjct:    1 MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAGWHRTEGGGT 78
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.636.1 vs. uniprot
Match: A0A6H5JR72_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR72_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.290e-38
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0 
Query:    1 MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAGWHRTEGGGT 78
            MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAG HR +GGGT
Sbjct:  787 MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLELLNARMDGTARGFAKSFGAGLHRAKGGGT 864
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1092.636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHU7_ECTSI8.460e-47100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR72_9PHAE3.290e-3896.15Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1092contigE-siliculosus-1a_F_contig1092:2538..3076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1092.636.1mRNA_E-siliculosus-1a_F_contig1092.636.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1092 2538..3076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1092.636.1 ID=prot_E-siliculosus-1a_F_contig1092.636.1|Name=mRNA_E-siliculosus-1a_F_contig1092.636.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=79bp
MGRALRSLPLTASKPLEDAARVCNSLLRTNARALGDSRLSLSRSVTQLEL
LNARMDGTARGFAKSFGAGWHRTEGGGT*
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