prot_E-siliculosus-1a_F_contig1092.635.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1092.635.1
Unique Nameprot_E-siliculosus-1a_F_contig1092.635.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length379
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: D7FJC0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC0_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 2.650e-223
Identity = 337/378 (89.15%), Postives = 344/378 (91.01%), Query Frame = 0
Query:    1 RCFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLWRLMLEHGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAENQEGDGGGSCEGRGAPAGGGQQSRPPAGGPAAEPRVSLLQGLRAQGVLSVDADQVAEILLAGPSPTAAPGTTTSTTAAAPTSPTTGDDGWRSGPGRIGGRFVLVDCRPPAPGGEGPAGGGMRAGGQAAGDGRVIWRRVLPAESFGREAAAVAEVLREVGAGGDALHAERSGAPCHKEAAEGAAPAALPPSRQLRLRRHPPSSGSRARRLARA 378
            RCFRSFVDRFAPNIFSTAQEEAGGG TLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPW  FVTLFASQTPAPALLHLWRLMLE+GDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAE+QEGDGGGSCEGRGAPAGG QQS PPAGGPAAEPRVSLLQGLRA+GVLSVDADQVAEILLAGPS TAAPG         PTSP TGDDGWRSG GRIGGRFVLVDCRPPAPGGEGPAGGGMRAGG+AAGDGRV+WRR+ PAESFGREAAAVAEVLREVGAGGDALHA  +            A AALPPSRQLRLRR PPSSGSRARRLARA
Sbjct:  116 RCFRSFVDRFAPNIFSTAQEEAGGGTTLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPW--FVTLFASQTPAPALLHLWRLMLEYGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAEDQEGDGGGSCEGRGAPAGGEQQSGPPAGGPAAEPRVSLLQGLRAEGVLSVDADQVAEILLAGPSSTAAPGXXXXXXXXXPTSPATGDDGWRSGSGRIGGRFVLVDCRPPAPGGEGPAGGGMRAGGEAAGDGRVMWRRIRPAESFGREAAAVAEVLREVGAGGDALHAAAT------------AEAALPPSRQLRLRRQPPSSGSRARRLARA 479          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: A0A6H5JR72_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR72_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 1.080e-202
Identity = 314/351 (89.46%), Postives = 320/351 (91.17%), Query Frame = 0
Query:    1 RCFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLWRLMLEHGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAENQEGDGGGSCEGRGAPAGGGQQSRPPAGGPAAEPRVSLLQGLRAQGVLSVDADQVAEILLAGPSPTAAPGTTTSTTAAAPTSPTTGDDGWRSGPGRIGGRFVLVDCRPPAPGGEGPAGGGMRAGGQAAGDGRVIWRRVLPAESFGREAAAVAEVLREVGAGGDALHAERSGAPCHKEAAEGAAPA 351
            RCFRSFVDRFAPNIFSTAQEE GGG TLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPW  FVTLFASQTPAPALLHLWRLMLE+GDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAE++EGDGGGSCEG GAPAGG QQS PPAGGPAAEPRVSLLQGLRA+ VLSVDADQVAEILLAGPS TA P       AAAPTSP TGDDGWRSG  + GG FVLVDCRPPAP  EGPAGGGMRAGG+ AGDGRVIWRRV PAESFGREA AVAEVLREV AG DALH ERSGAPCHKEA EGAAPA
Sbjct:  169 RCFRSFVDRFAPNIFSTAQEETGGGTTLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPW--FVTLFASQTPAPALLHLWRLMLEYGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFAEDREGDGGGSCEGPGAPAGGRQQSGPPAGGPAAEPRVSLLQGLRAEEVLSVDADQVAEILLAGPSSTAVPA------AAAPTSPATGDDGWRSGSRKFGGTFVLVDCRPPAPESEGPAGGGMRAGGEPAGDGRVIWRRVHPAESFGREAVAVAEVLREVEAGEDALHGERSGAPCHKEAVEGAAPA 511          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: A0A086Q273_TOXGO (TBC domain-containing protein n=18 Tax=Toxoplasma gondii TaxID=5811 RepID=A0A086Q273_TOXGO)

HSP 1 Score: 94.4 bits (233), Expect = 4.130e-17
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 0
Query:    1 RCFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLWRLMLEHGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLF 155
            RCF +FV RF P +F   +           L+    L + LL +HDPALAA +++ +V+P  Y TPW  F+TLF+S+T    L  LW   +  GDP    FL+LA L+  R  +  T    +P T+S + + S   + +++  A  L+  TP  F
Sbjct: 1175 RCFHAFVRRFLPGMFCDDE--------FTSLQCAFHLFKHLLTYHDPALAAFLERHYVTPELYVTPW--FLTLFSSKTSLLVLFALWDKYVAEGDPNFFPFLALALLICFRREIQRTEVSQLPETLSKITIHSVEQLRELWDLANELKAQTPLSF 1319          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: D7FKI7_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI7_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 3.770e-16
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 0
Query:    2 CFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLWRLMLEHGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLR--LRSAGVVDDVFRAAVALRESTPRLFCDVLRRACFA 165
            C+ +F+ RF P  F+  +E        + L+    L   LL +H P L   +D+  + P  YATPW  F+TLF++    P L  +W   L  GDP LH F+ LA+++ N   +++    ++P T+  L   +RS   V  + R A  L  +TP+ F  +LR A +A
Sbjct:  125 CYSAFLRRFLPYAFNQDEE-------FLSLQICFRLFRLLLLYHHPRLCRFLDQYQLQPELYATPW--FMTLFSNSLDLPRLYEVWDFYLYWGDPALHHFVVLAFVIGNAEAILKAEEANLPETMCRLTDGMRSVEEVRALMRTAKDLMLNTPKSFRKILRSALYA 281          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: UPI00096B5808 (LOW QUALITY PROTEIN: TBC domain-containing protein kinase-like protein n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B5808)

HSP 1 Score: 56.6 bits (135), Expect = 5.310e-5
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    2 CFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLW-RLMLEHGDPVLHQFLSLAWLVSNRLV 113
            C  +FV ++    F              V++ +L    QL+ FHDP LA H+++    P  +A PW  F+T+F+   P   +LHLW +L+L      LH  LS+   + +RL+
Sbjct:  535 CLSAFVPKYLHQFFLKDNS--------AVIQEYLAKFSQLIAFHDPQLANHLNEINFYPELFAIPW--FLTVFSHVFPLYKILHLWDKLLLGDSSYPLHIGLSVLTQLRDRLL 637          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: A0A8K0D7L6_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D7L6_9COLE)

HSP 1 Score: 56.6 bits (135), Expect = 5.330e-5
Identity = 32/104 (30.77%), Postives = 50/104 (48.08%), Query Frame = 0
Query:    2 CFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLW-RLMLEHGDPVLHQFLSL 104
            C  +F+ ++  N F             V+++ +L    QL+ FHDP LA H+      P  +A PW  F+T+F+   P   + HLW +L+L      LH  LS+
Sbjct:  549 CLSAFIPKYLHNFFLKDNS--------VIIQEYLAKFSQLIAFHDPVLANHLQNINFVPELFAIPW--FLTMFSHVFPLHKIFHLWDKLLLGDSSFPLHVGLSI 642          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Match: A0A7J7B0I1_9COLE (Uncharacterized protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7B0I1_9COLE)

HSP 1 Score: 56.2 bits (134), Expect = 7.080e-5
Identity = 33/104 (31.73%), Postives = 49/104 (47.12%), Query Frame = 0
Query:    2 CFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLW-RLMLEHGDPVLHQFLSL 104
            C   F+ ++  N F              V++ +L    QL+ FHDP LA H+      P  +A PW  F+T+F+   P   +LHLW +L+L      LH  LS+
Sbjct:  553 CLSMFIPKYLHNFFLKDNS--------AVIQEYLAKFSQLIAFHDPTLANHLQNINFIPELFAIPW--FLTMFSHVFPLHKILHLWDKLLLGDSSFPLHVGLSI 646          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1092.635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FJC0_ECTSI2.650e-22389.15Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JR72_9PHAE1.080e-20289.46Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A086Q273_TOXGO4.130e-1734.84TBC domain-containing protein n=18 Tax=Toxoplasma ... [more]
D7FKI7_ECTSI3.770e-1632.53Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
UPI00096B58085.310e-530.97LOW QUALITY PROTEIN: TBC domain-containing protein... [more]
A0A8K0D7L6_9COLE5.330e-530.77Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A7J7B0I1_9COLE7.080e-531.73Uncharacterized protein n=1 Tax=Abscondita termina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 31..112
e-value: 2.6E-8
score: 33.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..94
score: 12.215
NoneNo IPR availableGENE3D1.10.472.80coord: 25..153
e-value: 2.1E-14
score: 55.4
IPR039755TBC1 domain family member 23PANTHERPTHR13297UNCHARACTERIZEDcoord: 2..168
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 31..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1092contigE-siliculosus-1a_F_contig1092:103..2040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1092.635.1mRNA_E-siliculosus-1a_F_contig1092.635.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1092 103..2040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1092.635.1 ID=prot_E-siliculosus-1a_F_contig1092.635.1|Name=mRNA_E-siliculosus-1a_F_contig1092.635.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=379bp
RCFRSFVDRFAPNIFSTAQEEAGGGATLVVLEAHLVLLEQLLRFHDPALA
AHMDKCFVSPAAYATPWWVFVTLFASQTPAPALLHLWRLMLEHGDPVLHQ
FLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRES
TPRLFCDVLRRACFAENQEGDGGGSCEGRGAPAGGGQQSRPPAGGPAAEP
RVSLLQGLRAQGVLSVDADQVAEILLAGPSPTAAPGTTTSTTAAAPTSPT
TGDDGWRSGPGRIGGRFVLVDCRPPAPGGEGPAGGGMRAGGQAAGDGRVI
WRRVLPAESFGREAAAVAEVLREVGAGGDALHAERSGAPCHKEAAEGAAP
AALPPSRQLRLRRHPPSSGSRARRLARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR039755TBC1D23
IPR000195Rab-GTPase-TBC_dom