mRNA_E-siliculosus-1a_F_contig1089.607.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1089.607.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1089.607.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: A0A6H5JM01_9PHAE (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM01_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 1.040e-183
Identity = 312/340 (91.76%), Postives = 319/340 (93.82%), Query Frame = 1

Query:  109 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLGQDSNSSGVDGXXXXXXXXXXXXELPVEMRNLVSSMEGGFDG 1128
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRA+RTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG SSN+ LHYTLLPLEVLVRTRGPQFHSHAA+TFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXD+VQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPA +                ANGQNGRNKELAERQQKGAAQ SARKRRMLGQDSNS+GVDGXXXXXXXXXXXXELPVEMR+LVSSME GFDG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRAERTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSSNIRLHYTLLPLEVLVRTRGPQFHSHAAKTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDNVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPADNDSKGKSASA-------ANGQNGRNKELAERQQKGAAQRSARKRRMLGQDSNSNGVDGXXXXXXXXXXXXELPVEMRSLVSSMEEGFDG 333

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: D7FMS5_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS5_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 3.160e-171
Identity = 293/299 (97.99%), Postives = 294/299 (98.33%), Query Frame = 1

Query:  109 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 1005
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKT TKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG S N+ LHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVT ESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTITKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSGNIRLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTPESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 299

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JM01_9PHAE	1.040e-183	91.76	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
D7FMS5_ECTSI	3.160e-171	97.99	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]

Properties


Property Name	Value
Start	0
Stop	0
Cds size	1128
Model size	1130
Exons	9
Ec32 ortholog	Ec-21_000340.1
Ec32 ortholog description	RNA polymerase III subunit RPC82-related, helix-turn-helix
Hectar predicted targeting category	other localisation
BRITE	br01611,ko00000,ko00001,ko00002,ko03021
Best eggNOG OG	NA\|NA\|NA
Best tax level	Pythiales
COG Functional cat.	K
EggNOG OGs	1MFAR@121069,KOG2587@1,KOG2587@2759
EggNOG free text desc.	Source PGD
GOs	GO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
KEGG Module	M00181
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG Reaction	R00435,R00441,R00442,R00443
KEGG ko	ko:K03023
KEGG rclass	RC02795
Preferred name	POLR3C
Seed eggNOG ortholog	65071.PYU1_T012877
Seed ortholog evalue	5.2e-07
Seed ortholog score	62.4
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1089.607.1	prot_E-siliculosus-1a_F_contig1089.607.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1089 24432..32675 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1089:24430..32675-
coding sequence from alignment at E-siliculosus-1a_F_contig1089:24430..32675-

protein sequence of mRNA_E-siliculosus-1a_F_contig1089.607.1

>prot_E-siliculosus-1a_F_contig1089.607.1 ID=prot_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=376bp
NPSTCSLALQRLARVCSAHLAKECERCAGRGHHPIAMAFLLESQMPLVAL
ESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMG
VSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPS
SNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTL
PDVKEELLRREGEAARARKALANPEDEDEDDEDDHVQEVTSESIQKSFEE
LVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSGGGGGGNDSKSK
SASAANGQNGRNKELAERQQKGAAQTSARKRRMLGQDSNSSGVDGGNGDG
GDSDDDDELPVEMRNLVSSMEGGFDG

mRNA from alignment at E-siliculosus-1a_F_contig1089:24430..32675-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1089.607.1 ID=mRNA_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8246bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1089:24430..32675- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATCCATCTACCTGTAGTCTAGCCTTGCAGCGTCTCGCTCGCGTCTGCTC
GGCGCACCTCGCGAAGGAGTGTGAGGTGAGTCATGATGCTGATGTACGAA
GCTTGAACAGTGGGCATACCGCAGTAAACCGTTGCGTGGACTGCCGTAGA
CACAGCGGCTGCCGCAAGTTTTGAGAGATCCCAATATTTGTTGTACAGCA
GCAGTAGGTGCATGTTGCTGCGGCGGGCTGCTGTAGCGTGCGGGACAGGC
GCAGCTCTGAGGATATAGAGGGAAATTTCCTTCTTGCATCGACCTTGCAC
GCCTTTCGTCGCATTGCGCTCCTGGTGCTACGCATTCATACCCGCTAGAA
GTGCCCCCGGCCGGTGTCCCCCCAAAGAGGGCTATTGCGCCGCATTTCAC
TCATCTTCACCTTCTTGCCCTGCTGGCTGTTTAGCAGCGGTTGTGCGGCG
GTGGTGCTATGGCCGTCAAGCGTGACGTATCATAGGCTTCCAGGGGCTAG
TGAGGATGAAACTTGTACTTTCACAACCGCGGTGGGATCATATCCGAAAC
AAAGCTGGTCGATGCACGGTGCCTGCCTACAAGCAGGGTATTATTGTGTC
ACAACAGCAGTCAGGACAAAAGATCGCTCCGATCGGCTGGGTGAGACGGA
GGGATCGTGAGTGGCTGCAGTAATCGTGAGGCTCCGCACTCCAGACTCCA
GACCACTTGGCGATCCGACGGTAGCAGGCAGTTCCCTGCCTCTGCCCTGA
CAAAATGCCATTGGCTGCTGTTTCTTTCTAGATGCACACTCAGGACATTG
CTCCTTGCCTCTCCGCATAGACATATCCCGTTAATACTGCATACATCCAT
GCGACGAAGTGCGTTCTTTTGGTGTGTGCCCTAGCACCTGCTGTGTTGAT
GCAAACATACGTGCGTTGACGGTTGTTGGTGACCCCCCCCCAGCGGTGCG
CAGGCCGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGAGAGCCAG
ATGCCGCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGCTGAGCGT
CATCGAGGAGTACCACGGGCCCATCGTTTCGGTAAGTGGAGGGTTATGGT
TTTCCAAGTTTCAAGACTTTATTGTGCGTGTTCCGACTCAAACGCCTTGC
CAACACGTCCAGATTGCTGTAGTAGTAGTAGTAGTAGTTGTTGTTGTTGT
TGCTGTTGCTGTTGTTGAGTAGTTCACTTGAAACTTGCTGTTTTCGAGCG
TCTATCCAACATCACGTTTGCACCAACACTCTCGCTACGACAGGCGTGTG
GACGTCGTGAGTCGTGCACACGCGCACAACCCAGCCTGTCCTCTGGCGTG
GTCGTTAGTTCTCTTCGTCTTTGTCAAGTCGTTGGTTGTGGTCGTCGAAT
GTACGACCTTGCTTGTGTCAGCTTGCCGCAACTCCAACCGTTCCATGCGA
GCGGTTCAAGCGATATATCCTCTGTTGTAGTCTATTATGTGTCCGTGCGC
AATGTAGGATATTTTAGACCCGTTACGGTGCTGCATCGCAAAGAGCAAGT
CTTGGTACCAACGGCCAACAGCAGCGTTGGCTCTTTACGTCTGGCACCAG
CGCACGTCGGAGGGTTTGCACGAAAAGTTGAGCTCAAGCCACGGAATGAC
GAACAGATTTCGCCCCGAGCACCAGCTCTGTGGGTTTCCCGTGAAACTGT
GTGAATTTGAATCCCGTCCATTTCGTCGGAGGCGCTCTTGCCGTGCGATT
GTCTACGTAGTGATATACATATGTACCATTCCACCCTACACATCATGCCC
ATGGCGTACGTAGAATATCACTCCAACGCTGCTGCTGCTGCTTGCTGCTT
GCTGCTGCTGCTGCTGGTTCGTTTGCTGCTGCAGACCGTGGCGGAGGTAC
TGATGCGAGCCGACCGCACGACGTTGGCGGAGCTGACTCGACTGGTGCTG
AGAGACCAAGGGATCATGGGGGTCTCCAGGGCGGGGAAGACGAGAACTAA
AGTCACTGCCGCCAATGTGAGAAGCAGAGGCCGGCCGACCGTGCAGCAGT
AAACGCTACCTGTACCGTTGACCGTTTTGTTTTACACAAGAACCCCCCCC
CCCCCCCCGGCGACAGCTAGGAGAGAGAGGCTGCTGGCTGTGGTAGTGGT
GGTGACGCCCTACTCGTCTGTAGTCAGCCGACCGCGTTGCAGGTGTACAT
TTTGTTCAACGGGATGGTATTATCAATGATACACGCGTTACCGCACGCGC
ACTAGAGTTTCTGTGCTTGAGTCTGACGCCAACCTGCGGCTGTGTCCTGT
GGGCAGGTGAAGGAGTCGCTGCTGATCATGACGCAGCACAACATGGTGGC
CGCCGCCATGCCGACTGAGAAGGAGATGAGGAAGGCCAGAGCCAGCAGCT
CTGGACCCTCCAGCAACGTCCACTTGCACTACACGGTGAGAATCAAACAA
TCAGACAAAAACAGACCAGTCGGTCATGTCTGCGGCTGCTGCTGCTGCTG
CTGCTGCACATCTGCTGCTGTTGCGCACCTGCTGCTATTTCTGCTGCTTC
ATGTGCAGCTTTTCAACAGGGGGGGGCGAGTCGGTCGTACCGATGTGTGT
CATATCCCTCGTACGTACCTTGTATCGATGTGCGTCACGTCCCTCGTACC
TGGGGTGTTCGGGTAGCTAAATGTGGTGCCTGCTGTTGCTGTTGGTGCAC
CGCGTTGGGCTTGTCAGTCTCCACCATTTACACTGTAGGGTTAGCCCTAG
GAAAGATCCCCAGTTCCCCACGTCCATCCCATGCTGGCTTAAGCCGGCTT
GTATACCGCCTCCTGCGGGTGCTCTTGGTGATTCTTACCCTTTTCCATCC
ACTATGCAACGCTCTTTGTCTTGGACAATGCCGAGGATGACAGCAAAGAG
ATCGACAATGCTCCATTTCGACACATTTCAGCAGAAAAGTTGGCGGGATT
TTCTTTTCGGCTAATCGCGGGATGGAAAGTCTTTGAAAAATGGATATAAG
TGTGTTATATTGTGTGGATATTCCATAAGACGTCGCGTATCTCAGGGGGG
TCGGAAATGATGCTTCAGAACAAACGACGATCACCGTCGTAGTGTCTGTC
TCCCCCCCCTCTCCTTGCTGCGCTAAGAGGCACCGGCGTTCAGTTGTTAG
GAGGGTCTCACCCGCATACCAATGGCCGAATGCCGTTGCTGCGTTGTCGA
TATTTACCGCTGGTAGTGGTGCTACTGCTGTATGTGCCGCTGTCGCAACC
GCCGCTGCCGTGCTTCCTCTTCTTCTGTCTGCGTCGTACCAGCTACTACC
GCTGGAGGTGCTCGTGAGGACGAGGGGACCACAGTTTCACTCACACGCAG
CCAGGACGTTTTCGAAGGTCGCTGGTTTAGTGGTGGACTGTTTCTTGAGA
CACGGGAGGAGAACCCTGCCTGATGTAAGTGAGCCACGGCCTGAACACAG
CGCCGGCTGATGTACATAATATGCCTATTTCTGAAGATCTCTGTTGCATG
CGCCGACGGTTCTGGTTGTGTCGGTAGCAGGAGTTTTGTCTGTTGGGGCG
GATGGAGAGTGTTGTGGTTGTTTTGTCCTGTCTGGGTATTATACGCTGCA
TTCTATGCACCACTGCTGGTATATGGGGAAGGTGAGAAACAAAACACCGA
CAATTCGTTTGTTTCCTGGGTGATGCCTTCTGGTGCATCAAACATGTTCC
GAAGGTGTACATCATGTAGACTGTTTCCCGGAATACATGGGACGATAGCA
CACATACGACACCGGCTGCTGGAGAGGCACCGAGGACAGCTAAGAAGTTG
ACCACGCTCATGTATCATGTATGGATGTAATGTGTCTGCTTCAGCACGTG
ACGCGGCCAGGTCTATCCGTGCGTGTCGCCGAGAGATGAACTGAGATGAT
GAATCATGGTGTATGTGTGTTCCGTGTGTTTGTTGCAACATGACAGCACG
CAAACGATCCACACCCCCATGGTCCGAACACTCTCAGTACTCTCCGTACT
GCTGTAAATAGCATGGCAGACAGGTGTCTGAAAACGTAACACAAGACGAC
TGTAATATCAACACTACACAGGTTAAGGAGGAGCTTCTGAGAAGAGAAGG
CGAAGCGGCCAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACG
AGGATGACGAGGACGATCATGTCCAGGGTAAGAGATGTCATGTTTATAGA
CGGACGTCATCATTGGTCCACGGCAAGAAATGTTTGTAGATAGGCATCAT
ATGCTGCTGCAGCGGCCTACGGCCGTAGCGTGCGGAAGGTCGTGCGTTTG
TTGGTGAACGGGTTGCGTCAGTGACCGCGTGCGGGTCGAAGGTTGTGTGG
CCGTTTATTCTACGAGTGGTCAGTTCCTGTAGCCAACTGTGGTTTCGCAA
GGTTTGTGATGGTTGAGGGACTTTTGAGTGTTTGTGAGTACTGTTACTTG
TTTTTGCCGTGTGTTGGTGGATTCAACTAGTTTGTGTTTTTGACTGACAA
CCGTCGTCCCGGGTTAAAGCAGTCGCAGCAGAGTTAACTTTTTCATGTTT
TGCGCAACGATGCTGGTGAGGGTACGTATGTGTAAAGGTAACCGTTTAGC
GGTGGAGTGGCTAGATATCCACCTCGATCAAGGAAAAACCTGAACAACAT
TTTCTTGAGCATGAGAAGTGTTTCTTCTAGAATACTCTTTTGGTACCAGG
CTCCTAGTATCGCTTTAGCCCGCGGCCGTGCCCTCGCTGTCCGCTCGCGT
GCCATGTCAGTGTTTGTGGTGCATATATGATGATGTAATGAAAAAGTCTG
TTGTATTGTCACGAAATTACATGTGGCAGAGAGCTTCTGTGCTGTACCGT
GCTGAGTGTTGTGCTGAAAAATTGGCTAGAAATATATACCAATTTTTTTT
TTCTCATTTTCTCTGTCGTATGATTTTGTGGATCCTATCTAAGATGCTGT
TGGCCGGCGTGCGTGATCTATCACGCGTGCGTGTGTGTGTGTCCGCATGT
GTACATGTCAGAGGTGACGTCTGAGAGCATCCAGAAGAGCTTTGAGGAGC
TGGTAATGAAAAAATACATCGATAAGGTGCCCAAGCTCGACCTCGTCACA
CCTACCGTCGAGCCGGAGAAGGCAAAGTAAGTTACCATGCCACACAAGAC
ACAAGACACCAACTGTTGTTGTCGTTGTTGTTGGTGGAGGTGGCGGTGTC
GTTGTGGAACGTACAACATCGAAATCTTATTCTTCCTATTGCGCCCCGGA
AAACTGCCCGGCTAGGCTGCTAACCCTCTTGGTAGAATTCGTAAATGTCG
TAGATCTCGTAGATCCCGTAGATGCAAGAAGCTAACCCTCTTGGTAGAAA
TAATAAATCTCGTAGAACCCTCTTCGTAGACATCATAAATCTCGTAAATC
CCGTAGAAGCAAGAAGCTAACCCTCCTCGTAGACATAATAAATTTCGTAG
ATCCCGTATAGATGAAAGAACAATGATACCAAACATGACCAGTTTCGCGG
CGTGCGGAGTGAGTTGGTGTTCGCATATGTACACTTTCCGACGTACGTAC
GAGGCCTTAAAACGATTTGATTCGAGCAATTCGGACTTGACGAGTTGATG
GCCGTGCTATCGTACGCCTGAACGTTTCCCTCGCCAACCTTTCCCTCACA
CCCACCCAAAGAAACACCAATACGTAAATGTAGCCATACGTATAGTGCAC
AGAAACACGCACGTGCAGCTTGTGCCGTGAAGGCACCGCTGTCGATCTGA
CTCTACCACGGTACTGCTGTACTGGAAGAATTGCCATTTTGCGGCCTCTT
CGTGAGAACGCTGTCATAGAGGCGCGCTGTGTGATACAAGTATACTGTAG
CCGGATAGAGCATGTGTAAGGTCGTGCCGTGTTTGCTTTTGTTTGCATCT
CTAGAAAGCCGTCGATGACGCTCGGAGCACCAACCGGCTGTGTGATGCAC
GGTCGCCGTGTAGAGAGCATATTTGAGGCCATGCCGTATTTGCTTTTATT
TCCATCTCTAGAAAGCCGTCGATGACCTTCGGGGCACCAGCCGGCAGCGG
TGGCGGCGGCGGCGGCAATGACAGCAAGAGCAAGTCGGCGTCGGCAGCCA
ATGGGCAAAACGGAAGGAACAAGGAGCTGGCTGAGCGGCAGCAGAAGGGA
GCTGCGCAGACGTCGGCAAGGAAGCGCAGGATGCTCGGGGTATGTGTGTT
GTGTATTACATTACACCGAAGCATGTGACAAGATGTCCTGTCGTCTTACT
GTTGGGGTTATGTGAGGGAAGGGTTAAGAGTGCCCAACGTTAAACCCAAC
AATACCCCCCCAACGGCACCACTCTCTTTGTTGACTCCACTAGGGGGCGT
GACACTGCGCAGAGTACCGTAAGAGTTGGAGGGAGAGATAGCACCCCCCC
TAGACCGATGTTCAAAGCTCGATTGCTCCACAACCAAGATTGTCTGTACC
GTACCGTATACCGTACCGTGGTATTCCGTAACAGTCGGAGAGATGGCACC
ATCACCTAGACCGATGTTCAAAGCTCGATTTCACCACAACCAAGCTTGTG
CTAACACCAATAGTCCAATGGTGTTTCTGGAAACATCTCGTCGAGGGCTT
TCCGTAGACGTATCGGGTTATTTCAACACCCACTTGGTTGTGGAGCAATC
GAGCTTTGAAAGTCGGTGTAGAGGGGTGCCACCTCTCCGCCTATTACGGT
ATACCACGGTACGGTATACGGTACGGTACAGACAATCTTGGTTGTGGAGC
AATCGAGCGTTGAAAATCGGTCTGGGGGGTGTGTCATCTCTCCCTCCGCC
TCTTGCGGTAGGTAGAGGCAACGGCACATGTGTTCGACAACAACACCAAC
GCCGCCGAAACGAAAGGCTTAAGGCTCGGGAGGGTAGCGTGCGGTGCTGA
TACTCAGTGCGGCCTCGTCGCACGCAAGACGAACGGTCTTGAAGAGCTCA
GAACAGTTCTGGAGCGTCAAAACAAAAACGTCACCGCACTGCCAAGAACT
TTATTTTTTTTGGCGATACGGGGTGTCTTTTGAATTTGAAGACCTGGCGT
GTTTTTAATTTGAAGACATGTTGTGAGATCTTGCAAGGCGTCCATGTCCC
ATGCGATAGGCAGAACGTTAATATCAGCACCTCCAATCCCTATCACTCTA
GCGGGGGGGGGTGTAACGTGAAGAGGGCAAGCAATGTGCGTACGCGAACT
TCCGAGCCTTGAGCCTTTCGGCAGCATTGGTGATTTCGTCGAGAACGCTG
CTGTTGTCTCTCACTACACTCTGCGCTGTGCGCTCTCCGTCAGCATGATA
TGAGGATATGGCCGATGCACAAGATGGGGATTTTTTCACTTTAATTTTTA
ACAATTGTTTTTTCACCTTCATTTCGCCTCCTTTTTCGTATGTCCCGGTG
GTCTAAATAGTGGTATCCTCGACAACCGCTACCCGCAAAGCGAATCCCCA
TAAGGTAAAAAATGTACAACTTTACGGGTGAAACCGAGAACAAAATTGAA
AAGCTCTCGTGAGTACCAAACTTCGACGTTAGCACCGTTGACGAGGGAAA
GGGACGGCTGGACCCTTCTCGCGATAAAAAGAAAAATTCAGCAAGCACCG
CAGGAGGAAGGTGGGGCACGAAAATAAAAAGAAGAAACAAGCCCCGGTGT
TTACCCCCTCCTGTGTGACCCTGGATGGTTGTAGTTGTGCGAAAAAATAC
AAAAATACGCTGAAAAGTGTACTCTACATACACTGAATAGTGTAGTACAC
GCTCACCACGAAAAATGGGAGGGCTGTCGCCAAAGAAAATAGGACGAAGA
CACACAACAATATATTTCGCCTCCTTTTTTATCACGGATGTCCCCTTCTA
TTGGGTAGCATAATGGTTGGCCTGTGGCCTCGAAAGGCGTCCGCGTCTGT
TTGGCAGGCACGGACGTTTTGAGGTACTGGCACAGAACAGACACCGGAAC
GGTTTTGAATGTGTGAAGACAAGAACATCATTTACCTCGACGTCGATATA
TATCCCCATCCACATCTCCGAACTCCGTACCCCATCCCCTCTCATCTTTT
ATTGTTCTTATTTTATTACTCACCTTGTTTCCTGCCCCACTGCTGTGACC
GTAATGGCGGCGGCGGTGCAGCAAGACTCCAACAGCAGCGGAGTGGACGG
AGGCAACGGAGATGGCGGCGATTCCGACGACGACGACGAGCTCCCGGTAG
AGATGCGGAACCTGGTGAGCAGCATGGAGGGAGGCTTCGACGGCGC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1089:24430..32675-

>mRNA_E-siliculosus-1a_F_contig1089.607.1 ID=mRNA_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2256bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1089:24430..32675- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATCCATCTACCTGTAGTCTAGCCTTGCAGCGTCTCGCTCGCGTCTGCTC
GGCGCACCTCGCGAAGGAGTGTGAGAATCCATCTACCTGTAGTCTAGCCT
TGCAGCGTCTCGCTCGCGTCTGCTCGGCGCACCTCGCGAAGGAGTGTGAG
CGGTGCGCAGGCCGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGA
GAGCCAGATGCCGCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGC
TGAGCGTCATCGAGGAGTACCACGGGCCCATCGTTTCGCGGTGCGCAGGC
CGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGAGAGCCAGATGCC
GCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGCTGAGCGTCATCG
AGGAGTACCACGGGCCCATCGTTTCGACCGTGGCGGAGGTACTGATGCGA
GCCGACCGCACGACGTTGGCGGAGCTGACTCGACTGGTGCTGAGAGACCA
AGGGATCATGGGGGTCTCCAGGGCGGGGAAGACGAGAACTAAAGTCACTG
CCGCCAATACCGTGGCGGAGGTACTGATGCGAGCCGACCGCACGACGTTG
GCGGAGCTGACTCGACTGGTGCTGAGAGACCAAGGGATCATGGGGGTCTC
CAGGGCGGGGAAGACGAGAACTAAAGTCACTGCCGCCAATGTGAAGGAGT
CGCTGCTGATCATGACGCAGCACAACATGGTGGCCGCCGCCATGCCGACT
GAGAAGGAGATGAGGAAGGCCAGAGCCAGCAGCTCTGGACCCTCCAGCAA
CGTCCACTTGCACTACACGGTGAAGGAGTCGCTGCTGATCATGACGCAGC
ACAACATGGTGGCCGCCGCCATGCCGACTGAGAAGGAGATGAGGAAGGCC
AGAGCCAGCAGCTCTGGACCCTCCAGCAACGTCCACTTGCACTACACGCT
ACTACCGCTGGAGGTGCTCGTGAGGACGAGGGGACCACAGTTTCACTCAC
ACGCAGCCAGGACGTTTTCGAAGGTCGCTGGTTTAGTGGTGGACTGTTTC
TTGAGACACGGGAGGAGAACCCTGCCTGATCTACTACCGCTGGAGGTGCT
CGTGAGGACGAGGGGACCACAGTTTCACTCACACGCAGCCAGGACGTTTT
CGAAGGTCGCTGGTTTAGTGGTGGACTGTTTCTTGAGACACGGGAGGAGA
ACCCTGCCTGATGTTAAGGAGGAGCTTCTGAGAAGAGAAGGCGAAGCGGC
CAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACGAGGATGACG
AGGACGATCATGTCCAGGGTTAAGGAGGAGCTTCTGAGAAGAGAAGGCGA
AGCGGCCAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACGAGG
ATGACGAGGACGATCATGTCCAGGAGGTGACGTCTGAGAGCATCCAGAAG
AGCTTTGAGGAGCTGGTAATGAAAAAATACATCGATAAGGTGCCCAAGCT
CGACCTCGTCACACCTACCGTCGAGCCGGAGAAGGCAAAAGGTGACGTCT
GAGAGCATCCAGAAGAGCTTTGAGGAGCTGGTAATGAAAAAATACATCGA
TAAGGTGCCCAAGCTCGACCTCGTCACACCTACCGTCGAGCCGGAGAAGG
CAAAAAAGCCGTCGATGACCTTCGGGGCACCAGCCGGCAGCGGTGGCGGC
GGCGGCGGCAATGACAGCAAGAGCAAGTCGGCGTCGGCAGCCAATGGGCA
AAACGGAAGGAACAAGGAGCTGGCTGAGCGGCAGCAGAAGGGAGCTGCGC
AGACGTCGGCAAGGAAGCGCAGGATGCTCGGGAAAGCCGTCGATGACCTT
CGGGGCACCAGCCGGCAGCGGTGGCGGCGGCGGCGGCAATGACAGCAAGA
GCAAGTCGGCGTCGGCAGCCAATGGGCAAAACGGAAGGAACAAGGAGCTG
GCTGAGCGGCAGCAGAAGGGAGCTGCGCAGACGTCGGCAAGGAAGCGCAG
GATGCTCGGGCAAGACTCCAACAGCAGCGGAGTGGACGGAGGCAACGGAG
ATGGCGGCGATTCCGACGACGACGACGAGCTCCCGGTAGAGATGCGGAAC
CTGGTGAGCAGCATGGAGGGAGGCTTCGACGGCCAAGACTCCAACAGCAG
CGGAGTGGACGGAGGCAACGGAGATGGCGGCGATTCCGACGACGACGACG
AGCTCCCGGTAGAGATGCGGAACCTGGTGAGCAGCATGGAGGGAGGCTTC
GACGGC