prot_E-siliculosus-1a_F_contig1089.606.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 525 bits (1351), Expect = 1.080e-185 Identity = 295/353 (83.57%), Postives = 300/353 (84.99%), Query Frame = 0 Query: 1 MDGVFEEEGEGGHAEEEDVLGGRGGGIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLEFDAYALFIHDAAARLSNDAERERLDQVRXXXXXXXXXXXXXXENLMFFNTF 353
MDGVFEEEGEGGHAEEE VLGG IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLD+S+PTERKVDE VSASISARDLFDKLCEAWQT+NLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIR NLVKCTARDRYGKETARIME ILLQNKYLDQQQVGEMAMIPPSDARERLYRL++DRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA LFIHDA XXXXXXXXXXXXXXENLMFFNTF
Sbjct: 1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIME------------------ILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA-----------LFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM) HSP 1 Score: 149 bits (377), Expect = 9.780e-37 Identity = 88/285 (30.88%), Postives = 155/285 (54.39%), Query Frame = 0 Query: 28 GAGATVLD-SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
G+GAT + S++W+ G + RD R+ A + + + +A ++V+ ML S+P ER+ DEP S +SARDLF E ++A WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K +R E
Sbjct: 310 GSGATTDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLF----EMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVR------------------LLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENKELIARSE 569
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI) HSP 1 Score: 149 bits (376), Expect = 2.180e-36 Identity = 91/285 (31.93%), Postives = 153/285 (53.68%), Query Frame = 0 Query: 28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
G+GA T S++W+ G + RD R+ A + + + +A ++V ML SAP ER+ DEP SA +SARDLF+ N +A WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ V E + ++ +R RRKF +K +R E
Sbjct: 372 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFNME----SVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVR------------------LLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKELIARSE 631
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL) HSP 1 Score: 146 bits (369), Expect = 1.630e-35 Identity = 92/305 (30.16%), Postives = 159/305 (52.13%), Query Frame = 0 Query: 32 TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLEFDAYALFIHDAAARLSNDAER 323
T S++W+ G + RD R+ + + + +A ++V+ ML S+P ER+ DE SA +SARDLF+ + KA+P WR +++++ +C D + M+ K+ + +YVV+M K+V++++ V +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K +R E AL I D +LS +R
Sbjct: 349 TDETSLVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFNME---------SVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVR------------------LLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEALDI-DKFDKLSRSLDR 623
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.290e-35 Identity = 87/285 (30.53%), Postives = 152/285 (53.33%), Query Frame = 0 Query: 28 GAGATVLD--SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
G+ A +D S++W+ G + RD R+ A + + + +A ++V ML SAP ER+ DEP+SA +SARDLF N +++ WR ++++ +C D + MV K+ D R YVV+M K+V++++ +D++G +A+AR+ +L++ + L+Q+ +GE+A++P +DAR RLY L +++V +QE+PKRAD NP TF+ W++ + + E + ++ +R RRKF +K +R E
Sbjct: 353 GSSAVDMDERSLVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFGME----SVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFG------------------AASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKELIARSE 613
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP) HSP 1 Score: 145 bits (365), Expect = 4.200e-35 Identity = 90/290 (31.03%), Postives = 154/290 (53.10%), Query Frame = 0 Query: 28 GAGA-TVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
G+GA T S++W+ G + RD R+ A + + + +A ++V ML S+P ER+ DEP S +SARDLFD + KA+P WR ++++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K +R E
Sbjct: 303 GSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFDME---------SVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVR------------------LLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSE 562
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.390e-32 Identity = 88/284 (30.99%), Postives = 147/284 (51.76%), Query Frame = 0 Query: 26 GIGAGATVLDSVL-WKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSR 300
G+ AG + + L W+ G D+ RD R+ A + + + +A ++V ML S+P ER+ DE S ++AR+LF S L K+ WR +++++ +C D + MV K+ D R YVV+M K+V ++R +D++G +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY L +R+V +QEVPKRAD NP T Y W++ ++ + V E + ++ +R RRK +K +R
Sbjct: 363 GMAAGGALAEQALVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELFAVPAVK---SALPKDSK-DTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVR------------------LLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKELIAR 622
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A662YGR9_9STRA (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGR9_9STRA) HSP 1 Score: 135 bits (341), Expect = 9.970e-32 Identity = 83/280 (29.64%), Postives = 146/280 (52.14%), Query Frame = 0 Query: 36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD----WRRFVSWMSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
S++W+ G + RD R+ A + + + +A ++V ML S+P ER+ DEP S +SAR+LF K+ P+ WR ++++ +C D + MV K+ +T +P +YVV+M K+V+++R +D++G +ARI+ +L++ + L+Q+ +GE+A++P +D R RLY L +++V +QEVPKRAD NP TF+ W++ ++ V E + ++ +R RRK +K +R E
Sbjct: 364 SLVWRFGAAQLLRDLRHKACIKFASENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARELF--------AMESVKSALPPESNNPWRLLLNYIMVMCRDKSGMVMKV-SQETFDPNQTRAGDGGQYVVHMQKIVEFLRQATTHAYVQDKFGVASARIVR------------------LLVEKRQLEQKAIGELALLPSNDVRRRLYELFAEKLVKMQEVPKRADHNPALTFFCWSVDVPRMQARVAERIQDSVCRLRRRRKAEADENKELIARSE 614
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC) HSP 1 Score: 135 bits (339), Expect = 2.020e-31 Identity = 82/280 (29.29%), Postives = 149/280 (53.21%), Query Frame = 0 Query: 36 SVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPD-----WRRFVSWMSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACCSRLE 302
S++W+ G + R+ R+ A + + + +A ++V ML+ S+P ER+ +E SA +SARDL++ T KA+P WR +++++ +C D + M+ K+ D+ R YVV+M K+V++++ +DR+G +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RR F +K +R E
Sbjct: 358 SLVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVR------------------LLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIARSE 608
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Match: W7U6Z3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Z3_9STRA) HSP 1 Score: 128 bits (321), Expect = 6.140e-29 Identity = 87/264 (32.95%), Postives = 136/264 (51.52%), Query Frame = 0 Query: 27 IGAGATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERK--VDEPVSASISARDLFDKLCEAWQTSNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEARRKINYPRCSAAARLYCILLQNKYLDQQQVGEMAMIPPSDARERLYRLLKDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRK 288
+GAG D VLW++G ++FHRD R++ L V+ + + A +V+ +L S P ER V P S +S +L ++ L N V ++ L D +V + T Y V + ++++ +R + R+RY ++ R AR+ +LL KYLD QQV E+AM+ + RERLYR+ D +++VQE+P+RAD +PN TFYLWT QV + + + +YK LN+RLRR+
Sbjct: 409 VGAG----DEVLWRVGVEQFHRDLRHVTCLRFVRQKV--NTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSSRV-------QLPPNVTVK------MYLEVLQNDPVQIVDR---EGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRN----------ARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQ 640 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1089.606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1089.606.1 ID=prot_E-siliculosus-1a_F_contig1089.606.1|Name=mRNA_E-siliculosus-1a_F_contig1089.606.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=354bpback to top |