prot_E-siliculosus-1a_F_contig10885.602.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10885.602.1
Unique Nameprot_E-siliculosus-1a_F_contig10885.602.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length92
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.980e-51
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0
Query:    1 MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWG---GGFYNKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MVVALVQKCGREAR+KGRDPPTNLGFLLEEFFDFYGNQLNYAAVG+ + G   GGFYNKRDTGWFNESHPFRLSMQNPHET VDTGSNSYKV
Sbjct:  356 MVVALVQKCGREARDKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGITLLGEGGGGFYNKRDTGWFNESHPFRLSMQNPHETNVDTGSNSYKV 447          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A7S2RIZ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIZ8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.950e-15
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   17 GRDPPT--NLGFLLEEFFDFYGNQLNYAAVGVCVWGGG-FYNKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKVGPV 92
            G DP    NLG LL EF D YGN+ NY  VG+ V   G ++ KRD GWFN + P  L+++NP E T+D G N++ +G +
Sbjct:   41 GADPDRGLNLGRLLLEFLDLYGNKFNYEIVGISVQNSGSYFPKRDRGWFNPARPSLLALENPLEPTLDVGKNAFNMGNI 119          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A1V9ZX42_9STRA (Poly(A) RNA polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX42_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.030e-14
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0
Query:    1 MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFYNKRDT-GWFNESHPFRLSMQNPHETTVDTGSNSYKVGPV 92
            +VV+ +Q+  R           NLG LL EFF+ YGN LN + VG+CV  GG Y  +D   W + + PF L ++NPH+ + D  +NSY +  V
Sbjct:  283 LVVSFLQQYARNHTRSNEH--LNLGVLLVEFFELYGNSLNQSTVGICVRNGGSYFMKDERDWRDANRPFMLCVENPHDPSHDVAANSYDIRKV 373          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A6G0W652_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W652_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.110e-13
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0
Query:    1 MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFYNKR-DTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MVV+ +Q   R +R   R+  T+LG LL  FFD YGN  N   + + V  GG Y K+ D  W N   P  LSM+NPH+ T+D GSNS+++
Sbjct:  302 MVVSFLQHSNRNSRY--RNEGTDLGHLLFGFFDLYGNIFNSFDLTISVSNGGAYLKKTDLNWKNYQRPELLSMENPHDRTLDVGSNSFEI 389          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: J6EQG8_TRIAS (Polynucleotide adenylyltransferase n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6EQG8_TRIAS)

HSP 1 Score: 69.7 bits (169), Expect = 6.750e-12
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   19 DPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGG-FYNKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKVGPV 92
            DP  NLG LL EFF+ YG   NY  VG+ V  GG ++ KR  GW+ +S PF L +++P +T  D   +S+ +  V
Sbjct:  294 DPVKNLGVLLVEFFELYGRSFNYDEVGISVRKGGRYFPKRSRGWYLDSQPFLLCIEDPQDTDNDVSKSSFGIRQV 368          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A418FHG9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FHG9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.010e-11
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 MVVALVQKCGREA--REKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFY-NKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MVV+ +Q   R +    +G+D    LG LL +FFD YGN  N + + + V  GG Y  K    W N S P  LSM+NPH+T  D G+NSY+V
Sbjct:  185 MVVSFLQHKNRLSVYSTQGQD----LGHLLVDFFDLYGNVFNSSDLSISVREGGAYVTKESKDWKNFSRPDLLSMENPHDTNHDVGANSYEV 272          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: W4GG04_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG04_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.230e-11
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 MVVALVQKCGREA--REKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFY-NKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MVV+ +Q   R +    +G+D    LG LL +FFD YGN  N + + + V  GG Y  K    W N S P  LSM+NPH+T  D G+NSY+V
Sbjct:  309 MVVSFLQHKNRLSVYSTQGQD----LGHLLVDFFDLYGNVFNSSDLSISVREGGAYVTKESKDWKNFSRPDLLSMENPHDTNHDVGANSYEV 396          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A2N1JD47_9BASI (Polynucleotide adenylyltransferase n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JD47_9BASI)

HSP 1 Score: 68.2 bits (165), Expect = 2.330e-11
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    1 MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWG-GGFYNKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MV++ +Q   +  RE+   P  NLG LL E  + YG    Y   G+ V G GG++NKR  GW++   PF LS+++PH+ T D    S+ V
Sbjct:  233 MVLSFLQLHPKIQREE-IVPEKNLGTLLMELLELYGKNFGYDESGITVRGMGGYFNKRQRGWYDGRKPFLLSIEDPHDVTNDISKGSFAV 321          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A7S1B8K5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8K5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.940e-11
Identity = 35/89 (39.33%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    1 MVVALVQ-KCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFY-----NKRDTGWFNESHPFRLSMQNPHETTVDTG 83
            M+V+ +Q +C  +A  K R    NLG LL EF + YGN  NY  VG+ V  GG Y      +R   ++    PF L+++NP E  VD G
Sbjct:  159 MIVSFLQHRCREDAATKRRCSAYNLGCLLIEFLELYGNDFNYVTVGISVRNGGCYFAKGDRRRREHFWQPGRPFSLALENPLEPNVDAG 247          
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Match: A0A024TX62_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX62_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.840e-11
Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    1 MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWGGGFY-NKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKV 89
            MVV+ +Q   R +     +   +LG LL +FFD YGN  N   + + V  GG Y  K    W N   P  LSM+NPH+T  D G+NSY+V
Sbjct:  310 MVVSFLQHKNRNSSYS--NSMQDLGHLLVDFFDLYGNVFNSTDLTISVRDGGAYVMKESRNWKNYQRPDLLSMENPHDTNHDVGANSYEV 397          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10885.602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K966_9PHAE1.980e-5190.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2RIZ8_9STRA2.950e-1546.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZX42_9STRA8.030e-1439.78Poly(A) RNA polymerase n=1 Tax=Thraustotheca clava... [more]
A0A6G0W652_9STRA1.110e-1344.44Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
J6EQG8_TRIAS6.750e-1242.67Polynucleotide adenylyltransferase n=2 Tax=Trichos... [more]
A0A418FHG9_9STRA1.010e-1143.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4GG04_9STRA1.230e-1143.48Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A2N1JD47_9BASI2.330e-1138.89Polynucleotide adenylyltransferase n=1 Tax=Malasse... [more]
A0A7S1B8K5_9STRA4.940e-1139.33Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A024TX62_9STRA5.840e-1141.11Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 1..92
e-value: 6.2E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR23092:SF15INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATEDcoord: 1..89
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 1..89
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 1..87
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 23..79
e-value: 1.8E-12
score: 47.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10885contigE-siliculosus-1a_F_contig10885:142..808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10885.602.1mRNA_E-siliculosus-1a_F_contig10885.602.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10885 127..808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10885.602.1 ID=prot_E-siliculosus-1a_F_contig10885.602.1|Name=mRNA_E-siliculosus-1a_F_contig10885.602.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=92bp
MVVALVQKCGREAREKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGVCVWG
GGFYNKRDTGWFNESHPFRLSMQNPHETTVDTGSNSYKVGPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc