prot_E-siliculosus-1a_F_contig1085.588.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1085.588.1
Unique Nameprot_E-siliculosus-1a_F_contig1085.588.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length951
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: A0A6H5KV56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV56_9PHAE)

HSP 1 Score: 1196 bits (3094), Expect = 0.000e+0
Identity = 828/954 (86.79%), Postives = 837/954 (87.74%), Query Frame = 0
Query:    1 MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGGREDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLXXXXXXXXT---GLSIAAXXXXXXXXXXXXXPAPAPEGGGPEDQQPAAEVAVATESVGVSTDPLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRSQIIAGPAAAAEGDSAAFNFFGEPSSGGXXXSKAEADGATKGTTPREAPXXXXXXXXXXXXXVSSFQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQEKLGLPMSGQVGALGPPAAPPAVGIDVTPPPARSSPSLGHRGGGSQAPAEDLGLGSPTTGQLGRQASQMEEGILPPVAANQPSHLQQASPQQQQHQVDQAAFPKRERRPRPQSSSRGPAPSAGGIPPPSSTGNHATSQQPRHGQSELGSPPLRHLQQQQLLRSPFPQQPTPPLTPVQMGXXXXXXXXXXXXXXXXXXPGPNLPGPSRGSPNVTYGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSYRPPMHPSPSHVPRSHIGGRXXXXXXXXXXXGAPWSEAPLVMPPYPAAAGVPSSHLPGMVNGAMRHNXXXXXXXXXXXXQEELPGGFSLTPADYVRNAPHASKDTAATGGGPATAPVHTAPSTATAPPGQQWVNSAGPLVPSPXXXXXXXXXPADGQGVGPASAVDLERGMTSPWQGPGDAEGDAATAAVATTVGVAPPPGLTGVGRAPEAVGAGAVSGGGGGVLG 951
            MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGG+EDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLL  XXXXXX    GLS   XXXXXXXXXXXXX      GGGP+DQQPAAEVAV TESVGVSTDP ATEEAEVQTDV GPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGI KGRKEAATGLSKVLRLLH ASRFEAKG+RLPTAVDFFSK+LLGKT+PPDEADFDDCL QSVERASLYLDPSNGSKEVAPGVSYATLDD+VSTLRSQIIAGPAA AEGDSAAFNFFGEPSSG    SKAEADGA KGTTPREAP XXXXXXXXXXXXVSSFQPP                                 XXXXXXXX   KLGLPMSGQVG LGPPAAPP VGIDVTPPPARSSPSLGHRGGGSQ PAEDLGLGSPTTGQLGRQASQMEEGILPPVAANQPSHLQQASPQQQ HQVDQAAFPKRERRPRPQSSSRGP PSAGGIPPPS TGNHATSQQPRH  SELGSPPLRH QQQQLLRSPFPQQPTPPLTPVQMG            XXXXXXPGPNLPGPSRGS N+TYGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXX  XXXXXXXXXXXXXXX SYRPPMHPSPSH PRSHIGG XXXXXXX    G PWSEAPL MPPYPAAAGVPSSH  GMVNGAMRHNXXXXXX      QEELPGGF+LTPADYVRNAPHASKDTAATGGGPATAPVHTAPSTATAP GQQWVNS+GPLVPS XXXXXXXXX      VGPASAVDLERGMTSPWQGPGDAEGDA TAAVATTVGVAPPPGLTGVGRAPEAVGAGAVSGGGGGVLG
Sbjct:    1 MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGGKEDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLAPXXXXXXXXXXGLSXXXXXXXXXXXXXXXXXXXXXXGGGPQDQQPAAEVAVETESVGVSTDPPATEEAEVQTDVKGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIVKGRKEAATGLSKVLRLLHAASRFEAKGQRLPTAVDFFSKVLLGKTVPPDEADFDDCLAQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAATAEGDSAAFNFFGEPSSGCGSSSKAEADGAAKGTTPREAPPXXXXXXXXXXXXVSSFQPPAAEARGGEELSGYQLQQQRPPKSPATSARSPIKXXXXXXXXXXXKLGLPMSGQVGPLGPPAAPPVVGIDVTPPPARSSPSLGHRGGGSQRPAEDLGLGSPTTGQLGRQASQMEEGILPPVAANQPSHLQQASPQQQ-HQVDQAAFPKRERRPRPQSSSRGPGPSAGGIPPPS-TGNHATSQQPRHRHSELGSPPLRH-QQQQLLRSPFPQQPTPPLTPVQMGMVHGLGLSAAAPXXXXXXPGPNLPGPSRGSSNLTYGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHXXXXXHQXXXXXXXXXXXXXXX-SYRPPMHPSPSHAPRSHIGGXXXXXXXXG---GPPWSEAPLAMPPYPAAAGVPSSHQTGMVNGAMRHNXXXXXXAADPA-QEELPGGFNLTPADYVRNAPHASKDTAATGGGPATAPVHTAPSTATAPSGQQWVNSSGPLVPSXXXXXXXXXXXXXXXXVGPASAVDLERGMTSPWQGPGDAEGDAVTAAVATTVGVAPPPGLTGVGRAPEAVGAGAVSGGGGGVLG 946          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: D7G7T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T6_ECTSI)

HSP 1 Score: 632 bits (1630), Expect = 4.070e-216
Identity = 392/408 (96.08%), Postives = 396/408 (97.06%), Query Frame = 0
Query:    1 MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGGREDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLXXXXXXXX-TGLSIAAXXXXXXXXXXXXXPAPAPEGGGPEDQQPAAEVAVATESVGVSTDPLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRSQIIAGPAAAAEGDSAAFNFFGEPSSGGXXXSKAEADGATKGTTPREAPXXXXXXXXXXXXXVSSFQPP 407
            MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGG+EDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEERE AEKAKLLL  XXXXXX TGLSIAAXXXXXXXXXXXXXPAP PEGGGP+DQQPAAEVAVATESVGVSTD LATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSK+LLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDD+VSTLRSQIIAGPAAAAEGDSAAFNFFGEPSSGG   SKAEADGA KGTTPREAP XXXXXXXXXXX VSSFQPP
Sbjct:   46 MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGGKEDDATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEERETAEKAKLLLAPXXXXXXXTGLSIAAXXXXXXXXXXXXXPAPGPEGGGPQDQQPAAEVAVATESVGVSTDLLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKVLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAAAAEGDSAAFNFFGEPSSGGGSSSKAEADGAAKGTTPREAPPXXXXXXXXXXXNVSSFQPP 453          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: A0A835YXI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.160e-12
Identity = 119/307 (38.76%), Postives = 159/307 (51.79%), Query Frame = 0
Query:   45 ATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLXXXXXXXXTGLSIAAXXXXXXXXXXXXXPAPAPEGGGPEDQQPAAEVAVATESVGVSTDPLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPP--DEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRSQIIAGPAAAA 349
            A+++NPY+  +SKK R L+KK EKI+KTE  +ASGK L++EQ++L+ TK L+E ++ EH  + A +E VAK   E  AAE  K   XXXXXXXX       XXXXXXXXXXXXX  P  E        PA EVA AT     +T  + T  A VQT     P      PR VS A    A            +A +          A    K+LRLLH  S +      LP  V  F  ++ G+  PP  +EADF++ +  + + A  Y+  + G  E   GV+Y  L+ +V  L ++    PAAAA
Sbjct:   23 ASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKG--EAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEA---LPLMPA-EVADAT----TNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVP----------DAAQXXXXXXXXXXADVTRKLLRLLHAWS-WAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQG--EFGAGVTYVQLEAMVEELCTKFSPAPAAAA 306          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: A0A2D4CG95_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG95_PYTIN)

HSP 1 Score: 61.2 bits (147), Expect = 1.350e-6
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0
Query:  257 VLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGS-----KEVAPGVSYATLDDIVS 335
            +LR LH  +  +A G+ +P  +D+FSK+LLGKT PP E  F+D L +S+E A  YL  S+ +      E  P +++ T   IVS
Sbjct:  125 LLRTLHAVTLHQALGKDVPMVLDYFSKVLLGKTRPPAEVSFEDNLAESMEEAKRYLSCSDKAVDAVEAEKGPEINFFTDSHIVS 208          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: A0A8K1CFN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFN4_PYTOL)

HSP 1 Score: 63.2 bits (152), Expect = 1.530e-6
Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  254 LSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRSQI 341
            + ++L+ LH  +  +A G+ +P  +D+FSK+LLGKT  P E  F++ L +S+E A  YL+PS+  K VA  +SY  L  IV  L + +
Sbjct:  176 VEELLKTLHAVTLHQALGKEIPMVLDYFSKVLLGKTRLPVEVAFEENLAESLEEAKRYLEPSD--KVVACDMSYRDLRAIVDQLAAPL 261          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Match: A0A484EBL5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBL5_BRELC)

HSP 1 Score: 58.2 bits (139), Expect = 6.330e-5
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  228 AQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRS 339
            A E EK  QE +E   +  ++   T + ++L+ LHV +  +   + +P  +DFFSK+LLGKT PP E  +D+ L +S+E A  YL  S+  K  A   +Y  L   V    S
Sbjct:  169 AAESEKETQELQEEVASAVKETDYTDVYELLKTLHVVNLHQVLNKEVPMVLDFFSKVLLGKTRPPAELSYDENLMESLEEAKKYLMKSD--KTFACDTTYCELKAFVDKFAS 278          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1085.588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KV56_9PHAE0.000e+086.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7T6_ECTSI4.070e-21696.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXI0_9STRA5.160e-1238.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CG95_PYTIN1.350e-640.48Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CFN4_PYTOL1.530e-639.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EBL5_BRELC6.330e-535.71Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availableCOILSCoilCoilcoord: 221..241
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 421..723
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 421..723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1085contigE-siliculosus-1a_F_contig1085:10213..14477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1085.588.1mRNA_E-siliculosus-1a_F_contig1085.588.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1085 9701..14477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1085.588.1 ID=prot_E-siliculosus-1a_F_contig1085.588.1|Name=mRNA_E-siliculosus-1a_F_contig1085.588.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=951bp
MSPSPDTQDSNRSNSIMASSGAPQQLVAQRAFADTSMRGGREDDATTSNP
YLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFAL
SEHERVKAAMEAVAKDVEEREAAEKAKLLLAPPPPPPPTGLSIAAAPEPE
QPPAALSIPAPAPEGGGPEDQQPAAEVAVATESVGVSTDPLATEEAEVQT
DVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEA
ATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKMLLGKTMPPDEADFDDC
LGQSVERASLYLDPSNGSKEVAPGVSYATLDDIVSTLRSQIIAGPAAAAE
GDSAAFNFFGEPSSGGGSSSKAEADGATKGTTPREAPPPPAPQPSNGNGN
VSSFQPPAASARGGEELSGFQQQQQRPPKSPATSARSPTKQQQQQQQQHQ
EKLGLPMSGQVGALGPPAAPPAVGIDVTPPPARSSPSLGHRGGGSQAPAE
DLGLGSPTTGQLGRQASQMEEGILPPVAANQPSHLQQASPQQQQHQVDQA
AFPKRERRPRPQSSSRGPAPSAGGIPPPSSTGNHATSQQPRHGQSELGSP
PLRHLQQQQLLRSPFPQQPTPPLTPVQMGMGHGLGLSAAAPVPSPSPPGP
NLPGPSRGSPNVTYGNNGGGWGGYAQQPPPPLQQRPQGAPPTQQQQHHHQ
HHHQHHRHQHPPHHHQHHQQQQQHSYRPPMHPSPSHVPRSHIGGRGRGGG
GGGGVGGAPWSEAPLVMPPYPAAAGVPSSHLPGMVNGAMRHNNNSGAAAA
AGAAQEELPGGFSLTPADYVRNAPHASKDTAATGGGPATAPVHTAPSTAT
APPGQQWVNSAGPLVPSPSPSPTPSAPPADGQGVGPASAVDLERGMTSPW
QGPGDAEGDAATAAVATTVGVAPPPGLTGVGRAPEAVGAGAVSGGGGGVL
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B