prot_E-siliculosus-1a_F_contig1085.587.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1085.587.1
Unique Nameprot_E-siliculosus-1a_F_contig1085.587.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length662
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: A0A6H5KTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT4_9PHAE)

HSP 1 Score: 1074 bits (2777), Expect = 0.000e+0
Identity = 616/661 (93.19%), Postives = 626/661 (94.70%), Query Frame = 0
Query:    1 MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENNVGMDGKKDSDLFKNADAQENRSKEEHAXXXREEQDRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIAXXXXXXXXXXXXXXXXXXXXSNXXXDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVPGLLPDAYFLPFAEQMRPWVLQLAAEFDSWMQKVVAEVMGKVESSAMRHERAAPKDQAD 661
            M VRGAQQDPSA KE E YMDLA+ DD+LGQQLRELDSNMST+FQNLEN VG DGKKDSDLFKNAD QENRSKEE     REEQ RQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKG+HLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLK ARVPVGNSVLKNSALNFRLNR DGKREAFGGAAASGGGNARGGFVSALVRKVARGI+HENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFE+ET MLAFDELGAVRNLTP TDRPDDF DTLYALHNSK LEEELAADHQ HHEGFLDAHHLGWLVDAGH+LLEGTKAGMAGHAAA+AAA+RPTDLRAAVLHG EHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIA XXXXXXXXXXXXXXX    SNXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVP LLPD YFLPFAEQMRPWVLQLAAEFDSWMQ+VVAEVMGKVE SAMR ERAAPKDQAD
Sbjct:    1 MGVRGAQQDPSARKEGE-YMDLAD-DDILGQQLRELDSNMSTMFQNLENKVGKDGKKDSDLFKNADVQENRSKEEDVERKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGKHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKVARVPVGNSVLKNSALNFRLNRLDGKREAFGGAAASGGGNARGGFVSALVRKVARGINHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEKETNMLAFDELGAVRNLTPTTDRPDDFNDTLYALHNSKVLEEELAADHQDHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAATRPTDLRAAVLHGHEHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIAAXXXXXXXXXXXXXXX----SNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVPALLPDVYFLPFAEQMRPWVLQLAAEFDSWMQRVVAEVMGKVEGSAMRQERAAPKDQAD 655          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: D7G7T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T7_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 4.370e-287
Identity = 409/430 (95.12%), Postives = 416/430 (96.74%), Query Frame = 0
Query:    1 MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENNVGMDGKKDSDLFKNADAQENRSKEEHAXXXREEQDRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLM 430
            MA RGAQQDPSALKEE DYMDLAEEDDVLGQQLRELDSNMST+FQNLENNVG DGKKDSDLFK+ADAQENRSKEE A   REEQ RQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGG  AS   NARGGFVSALVRKVARGISHE+LALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAA+HQGHHEGFLDAHHLGWLVDAGH+LLEGTKAGMAGHAAA+AAA+RPTDLRAAVLHGREHLPGKFRPLYRHEANGQW DTSFVEMILTNYLM
Sbjct:    1 MAGRGAQQDPSALKEE-DYMDLAEEDDVLGQQLRELDSNMSTMFQNLENNVGKDGKKDSDLFKSADAQENRSKEEDANKKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGGGASXXXNARGGFVSALVRKVARGISHESLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAANHQGHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAAARPTDLRAAVLHGREHLPGKFRPLYRHEANGQWLDTSFVEMILTNYLM 429          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: A0A836CDK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.780e-35
Identity = 111/349 (31.81%), Postives = 168/349 (48.14%), Query Frame = 0
Query:  132 LWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPEL 480
            L++AAA++++ F  RP+   + RK++S+ +D  ++ ATL +Y  RC+ W L+A R+P+ +S LK+ +L+ R            GA  +              R++ +  +  +L L   +LKVHVKG+++G+T+E PP DI+ F ++L ADGNY+P+GF F  E   ++F  LGA R +     RP                     +   G+                        K GM           R T L   +   R     K    Y H A G  +D S VEM++TN+L+VR L+PW +LYP ESGL   +G           VLAS VY+++R LRPEL
Sbjct:   73 LFRAAAIVVLAFVARPRLDALSRKSKSRTQDADEFAATLALYQGRCRAWALRATRLPL-SSCLKDPSLSLRA-----------GATTAXXXX----XXXXXXRRLLQAKTGGSLELRHTKLKVHVKGIIDGVTREPPPHDIIKFLAFLIADGNYYPEGFLFPGECARMSFSPLGATRWIV----RP-------------------AGSGDNGNGXXXXXXXXXXXXXXXXXXXRTTVKRGM-----------RKTSLPPTLEIVRR---SKKACTYVHGATGVAYDVSTVEMLVTNFLLVRQLLPWAVLYPWESGLKRLAG-----------VLASCVYMLLRPLRPEL 357          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTT4_9PHAE0.000e+093.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7T7_ECTSI4.370e-28795.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CDK1_9STRA7.780e-3531.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..661
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1085contigE-siliculosus-1a_F_contig1085:6133..8783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1085.587.1mRNA_E-siliculosus-1a_F_contig1085.587.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1085 6133..8783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1085.587.1 ID=prot_E-siliculosus-1a_F_contig1085.587.1|Name=mRNA_E-siliculosus-1a_F_contig1085.587.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=662bp
MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENN
VGMDGKKDSDLFKNADAQENRSKEEHAEKKREEQDRQKERAALLAQLKGL
SDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRT
LMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALN
FRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLM
RLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLA
FDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLD
AHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLP
GKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPS
SGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAA
KIAAAAAAAAAAAAAAAAAADDDSNDDNDDNDNDDEEGQDSSNRDEAGRA
ESGEAKKGGTKTNKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQ
LVPGLLPDAYFLPFAEQMRPWVLQLAAEFDSWMQKVVAEVMGKVESSAMR
HERAAPKDQAD*
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