mRNA_E-siliculosus-1a_F_contig1085.587.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: A0A6H5KTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT4_9PHAE) HSP 1 Score: 1074 bits (2777), Expect = 0.000e+0 Identity = 616/661 (93.19%), Postives = 626/661 (94.70%), Query Frame = 1
Query: 1 MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENNVGMDGKKDSDLFKNADAQENRSKEEHAXXXREEQDRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIAXXXXXXXXXXXXXXXXXXXXSNXXXDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVPGLLPDAYFLPFAEQMRPWVLQLAAEFDSWMQKVVAEVMGKVESSAMRHERAAPKDQAD 1983
M VRGAQQDPSA KE E YMDLA+ DD+LGQQLRELDSNMST+FQNLEN VG DGKKDSDLFKNAD QENRSKEE REEQ RQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKG+HLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLK ARVPVGNSVLKNSALNFRLNR DGKREAFGGAAASGGGNARGGFVSALVRKVARGI+HENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFE+ET MLAFDELGAVRNLTP TDRPDDF DTLYALHNSK LEEELAADHQ HHEGFLDAHHLGWLVDAGH+LLEGTKAGMAGHAAA+AAA+RPTDLRAAVLHG EHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIA XXXXXXXXXXXXXXX SNXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVP LLPD YFLPFAEQMRPWVLQLAAEFDSWMQ+VVAEVMGKVE SAMR ERAAPKDQAD
Sbjct: 1 MGVRGAQQDPSARKEGE-YMDLAD-DDILGQQLRELDSNMSTMFQNLENKVGKDGKKDSDLFKNADVQENRSKEEDVERKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGKHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKVARVPVGNSVLKNSALNFRLNRLDGKREAFGGAAASGGGNARGGFVSALVRKVARGINHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEKETNMLAFDELGAVRNLTPTTDRPDDFNDTLYALHNSKVLEEELAADHQDHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAATRPTDLRAAVLHGHEHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIAAXXXXXXXXXXXXXXX----SNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVPALLPDVYFLPFAEQMRPWVLQLAAEFDSWMQRVVAEVMGKVEGSAMRQERAAPKDQAD 655
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: D7G7T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T7_ECTSI) HSP 1 Score: 799 bits (2063), Expect = 4.370e-287 Identity = 409/430 (95.12%), Postives = 416/430 (96.74%), Query Frame = 1
Query: 1 MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENNVGMDGKKDSDLFKNADAQENRSKEEHAXXXREEQDRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLM 1290
MA RGAQQDPSALKEE DYMDLAEEDDVLGQQLRELDSNMST+FQNLENNVG DGKKDSDLFK+ADAQENRSKEE A REEQ RQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGG AS NARGGFVSALVRKVARGISHE+LALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAA+HQGHHEGFLDAHHLGWLVDAGH+LLEGTKAGMAGHAAA+AAA+RPTDLRAAVLHGREHLPGKFRPLYRHEANGQW DTSFVEMILTNYLM
Sbjct: 1 MAGRGAQQDPSALKEE-DYMDLAEEDDVLGQQLRELDSNMSTMFQNLENNVGKDGKKDSDLFKSADAQENRSKEEDANKKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGGGASXXXNARGGFVSALVRKVARGISHESLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAANHQGHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAAARPTDLRAAVLHGREHLPGKFRPLYRHEANGQWLDTSFVEMILTNYLM 429
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Match: A0A836CDK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK1_9STRA) HSP 1 Score: 150 bits (378), Expect = 7.780e-35 Identity = 111/349 (31.81%), Postives = 168/349 (48.14%), Query Frame = 1
Query: 394 LWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGAAASGGGNARGGFVSALVRKVARGISHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAADHQGHHEGFLDAHHLGWLVDAGHNLLEGTKAGMAGHAAASAAASRPTDLRAAVLHGREHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPEL 1440
L++AAA++++ F RP+ + RK++S+ +D ++ ATL +Y RC+ W L+A R+P+ +S LK+ +L+ R GA + R++ + + +L L +LKVHVKG+++G+T+E PP DI+ F ++L ADGNY+P+GF F E ++F LGA R + RP + G+ K GM R T L + R K Y H A G +D S VEM++TN+L+VR L+PW +LYP ESGL +G VLAS VY+++R LRPEL
Sbjct: 73 LFRAAAIVVLAFVARPRLDALSRKSKSRTQDADEFAATLALYQGRCRAWALRATRLPL-SSCLKDPSLSLRA-----------GATTAXXXX----XXXXXXRRLLQAKTGGSLELRHTKLKVHVKGIIDGVTREPPPHDIIKFLAFLIADGNYYPEGFLFPGECARMSFSPLGATRWIV----RP-------------------AGSGDNGNGXXXXXXXXXXXXXXXXXXXRTTVKRGM-----------RKTSLPPTLEIVRR---SKKACTYVHGATGVAYDVSTVEMLVTNFLLVRQLLPWAVLYPWESGLKRLAG-----------VLASCVYMLLRPLRPEL 357 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1085.587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1085.587.1 >prot_E-siliculosus-1a_F_contig1085.587.1 ID=prot_E-siliculosus-1a_F_contig1085.587.1|Name=mRNA_E-siliculosus-1a_F_contig1085.587.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=662bp MAVRGAQQDPSALKEEEDYMDLAEEDDVLGQQLRELDSNMSTVFQNLENNback to top mRNA from alignment at E-siliculosus-1a_F_contig1085:6133..8783- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1085.587.1 ID=mRNA_E-siliculosus-1a_F_contig1085.587.1|Name=mRNA_E-siliculosus-1a_F_contig1085.587.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2651bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1085:6133..8783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1085:6133..8783- >mRNA_E-siliculosus-1a_F_contig1085.587.1 ID=mRNA_E-siliculosus-1a_F_contig1085.587.1|Name=mRNA_E-siliculosus-1a_F_contig1085.587.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3972bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1085:6133..8783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |