prot_E-siliculosus-1a_F_contig1084.583.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1084.583.1
Unique Nameprot_E-siliculosus-1a_F_contig1084.583.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length526
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 1.540e-175
Identity = 482/517 (93.23%), Postives = 483/517 (93.42%), Query Frame = 0 
Query:    1 MILPWSLLLLVYSTVVEGVHPCLESDSGRCTFGTTDVDLRYCGLGDEDFEDLSRCLDTAGRSTITEVNLDDNDFVDFPEGLLADLSAVTYIRINHLPYLTEVPEGLFENLATLEKISLRDNALVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLYENQVDLSEPSVLALPPTLFRDTQNLEELWIHTNNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLYQTESDIGLPPALFRDNENLEILWLHKNGCGEVDEXXXXXXXKLQFLRLTFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTSIVEIDVTENPDLLCVPPSPAGEILRDSSASQDESCAGTETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRPG 517
            MILPWSLLLLVYSTV EGVHPCLESDSGRCTFGTTDVD+RYCGLGDEDFEDLSRCLDTAGRSTITEVNLDDNDFVDFPEGL A LSAVTYIRINHLPYLTEVPEGLFENLATLEKISLRDNALVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LY YENQVDLSEPSVLALPPTLFRDTQNLEELWIHTNNIV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLYQTESDIGLPPA                       XXXXXXXKLQFLRLTFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTSIVEIDVTENPDLLCVPPSPAGEILRDS ASQDESC GTETCSNGLEGIDGNGVVCCPL CGQCGGKGCY SGSANGL GDSCCGGGIKASDEYCDETNEAPCIIGSRPG
Sbjct:    1 MILPWSLLLLVYSTVAEGVHPCLESDSGRCTFGTTDVDVRYCGLGDEDFEDLSRCLDTAGRSTITEVNLDDNDFVDFPEGLFAGLSAVTYIRINHLPYLTEVPEGLFENLATLEKISLRDNALVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELYFYENQVDLSEPSVLALPPTLFRDTQNLEELWIHTNNIVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLYQTESDIGLPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLQFLRLTFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTSIVEIDVTENPDLLCVPPSPAGEILRDSIASQDESC-GTETCSNGLEGIDGNGVVCCPLACGQCGGKGCYTSGSANGLSGDSCCGGGIKASDEYCDETNEAPCIIGSRPG 516
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.510e-64
Identity = 196/303 (64.69%), Postives = 202/303 (66.67%), Query Frame = 0 
Query:  292 YLYQTESDIGLPPALFRDNENLEILWLHKNGCGEVDEXXXXXXXKLQFLRLTFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTSIVEIDVTENPDLLCVPPSPAGEILRDSSASQDESCA--------------------------------------------------------------------------GTETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRPGETM 520
            YLY+TESD GLPPAL R+N+NLEILWL+K GCGEVDE       KL+FLRLTFN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    IVEIDV ENPDLLCV P PAGEILRDSSASQDESCA                                                                          G ETCSNGLEGIDG+G VCC L CGQCGGKGCY SGSANGLGGD CC GGIKASDEYCDETNEAPCIIGSRPG  M
Sbjct:   10 YLYETESDTGLPPALLRENKNLEILWLNKIGCGEVDEDLFSGLSKLRFLRLTFNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVEIDVAENPDLLCVAPGPAGEILRDSSASQDESCAVERRVAVSVHNLLISDMGSNLYVESNGSLARPSSLTKRHGSRSQSWRLMEDLTAVFCITGLLKCVAPYPLHAQAGAETCSNGLEGIDGSGGVCCSLDCGQCGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGSRPGAKM 312
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: A0A6H5L6F5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F5_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 6.200e-55
Identity = 218/270 (80.74%), Postives = 224/270 (82.96%), Query Frame = 0 
Query:  195 VDLSEPSVLALPPTLFRDTQNLEELWIHTNNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLYQTESDIGLPPALFRDNENLEILWLHKNGCGEVDEXXXXXXXKLQFLRLTFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTSIVEIDVTENPDLLCVPPSPAGEILRDSSASQDESCAGTETCSNGLEGIDGNGVVCC 464
            VDLSEPSVLALPPTLFRDTQNLEELWIHTNNIV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          LYLY+TESDI LPPALFR+N+NLEILWL+KNGCG+VDE       K QFLRLTF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    IVEIDV ENPDLLCV PSPAGEILRDSSASQDESC G ETCSNGLEGIDG+G VCC
Sbjct:    2 VDLSEPSVLALPPTLFRDTQNLEELWIHTNNIVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXET------------------------LYLYETESDIDLPPALFRENKNLEILWLNKNGCGDVDENLFSGLSKXQFLRLTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVEIDVAENPDLLCVAPSPAGEILRDSSASQDESC-GAETCSNGLEGIDGSGGVCC 246
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.980e-31
Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 0 
Query:  446 TETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            +ETCSNG+EGIDGNGVVCCPLGCGQCGG GC  SG+A GLG DSCCGG IKASDEYCDETNEAPCIIGSRP
Sbjct:  344 SETCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCIIGSRP 414
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.640e-27
Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:  434 DSSASQDESCAGTETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            DS+   D +    ETCSNGLEGI+GNGVVCCPL C QCGG GC  SGSA GLG +SCCGGGIKAS  YCD+TNEAPCIIGSRP
Sbjct:  457 DSTTDDDFTTDEVETCSNGLEGIEGNGVVCCPLECNQCGGTGCTMSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSRP 539
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 4.150e-26
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0 
Query:  441 ESCAGTETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            ES   T+TCS+G EGIDGNGVVCCP+GCGQC G GC  +GSANGLG +SCCGGG+K+   YCD+TNEAPCIIGSRP
Sbjct:  330 ESADETQTCSDGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGGGVKSLGLYCDDTNEAPCIIGSRP 405
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: D7G8L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 2.830e-24
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0 
Query:  449 CSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRPGETMRSWI 524
            C+NG+EGIDGNGVVCCPL CGQCGG+GC  SG+  GLG +SCCGGG+K+++ YCD T +APCI GS P E + + +
Sbjct:   95 CNNGIEGIDGNGVVCCPLDCGQCGGEGCSGSGADFGLGSESCCGGGVKSANNYCDVTGKAPCIYGSPPEEALLTTV 170
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.210e-23
Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0 
Query:  447 ETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            +T  +G EGIDGNGVVCCP+GCGQCGG GC  +GSANGLG +SCCGGG+K+   YCD+TNEAPCIIGS P
Sbjct:  571 DTQIDGTEGIDGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAP 640
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.280e-22
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 0 
Query:  444 AGTETCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            A   TCSNG++GIDGNG+VCCP+ C QCGG GC  +G A GLG +SCCG G+KAS  YCD+T+EAPCIIGS P
Sbjct:  522 ASVTTCSNGVQGIDGNGIVCCPMECNQCGGSGCTHAGRAAGLGAESCCGSGVKASGRYCDDTDEAPCIIGSSP 594
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BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.620e-22
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 
Query:  448 TCSNGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDEYCDETNEAPCIIGSRP 516
            TCS+G+EGIDGNGVVCCPLGCGQC G GC  +G+ANGL   SCCGGGIK+S  YCD+T  APCI GS P
Sbjct:  534 TCSDGIEGIDGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAP 602
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1084.583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FIC5_ECTSI1.540e-17593.23Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JZG5_9PHAE1.510e-6464.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6F5_9PHAE6.200e-5580.74Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JC43_9PHAE3.980e-3187.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV4_ECTSI4.640e-2773.49Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7G651_ECTSI4.150e-2673.68Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
D7G8L8_ECTSI2.830e-2463.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUS5_9PHAE4.210e-2372.86MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FUJ9_ECTSI1.280e-2267.12Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
A0A6H5L8H5_9PHAE2.620e-2272.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 110..129
e-value: 99.0
score: 6.1
coord: 382..401
e-value: 63.0
score: 7.6
coord: 134..153
e-value: 520.0
score: 0.6
coord: 334..353
e-value: 65.0
score: 7.5
coord: 358..377
e-value: 16.0
score: 12.1
NoneNo IPR availablePANTHERPTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINcoord: 202..341
coord: 64..247
coord: 248..422
NoneNo IPR availablePANTHERPTHR24373:SF271CARBOXYPEPTIDASE N SUBUNIT 2coord: 64..247
NoneNo IPR availablePANTHERPTHR24373:SF271CARBOXYPEPTIDASE N SUBUNIT 2coord: 202..341
coord: 248..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..525
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.903
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 195..426
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 37..251
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 261..284
e-value: 7.7
score: 14.2
coord: 237..260
e-value: 0.039
score: 23.1
coord: 383..405
e-value: 6.1
score: 15.0
coord: 158..181
e-value: 24.0
score: 10.2
coord: 182..212
e-value: 23.0
score: 10.4
coord: 358..381
e-value: 6.0E-6
score: 35.8
coord: 110..133
e-value: 0.12
score: 21.5
coord: 334..357
e-value: 0.0037
score: 26.5
coord: 213..236
e-value: 29.0
score: 9.4
coord: 134..157
e-value: 0.011
score: 25.0
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 137..194
e-value: 1.7E-9
score: 37.3
coord: 196..250
e-value: 3.8E-9
score: 36.2
coord: 360..417
e-value: 1.9E-11
score: 43.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 33..197
e-value: 4.4E-31
score: 109.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 198..441
e-value: 2.6E-54
score: 186.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1084contigE-siliculosus-1a_F_contig1084:7014..20729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1084.583.1mRNA_E-siliculosus-1a_F_contig1084.583.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1084 7014..20729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1084.583.1 ID=prot_E-siliculosus-1a_F_contig1084.583.1|Name=mRNA_E-siliculosus-1a_F_contig1084.583.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=526bp
MILPWSLLLLVYSTVVEGVHPCLESDSGRCTFGTTDVDLRYCGLGDEDFE
DLSRCLDTAGRSTITEVNLDDNDFVDFPEGLLADLSAVTYIRINHLPYLT
EVPEGLFENLATLEKISLRDNALVTLPEGLFSGLSLLRIIHMDHNPITQL
PAGLFSGLSSLESLRMRDLHLAEVEEDLFSGLSALRELYLYENQVDLSEP
SVLALPPTLFRDTQNLEELWIHTNNIVVLDPEIFSGLTKLSFLHLDSNPI
KVLEDGLFSDLSSLETLRLRGLDVSEVPEGTFNGLSALKSLYLYQTESDI
GLPPALFRDNENLEILWLHKNGCGEVDENLFSGLSKLQFLRLTFNGLSSL
PEDVFTDLGQLQELYLGFNKLTTLPAGIFSNQGQLQYLGLSDNLLETLPG
GLFTDLTSIVEIDVTENPDLLCVPPSPAGEILRDSSASQDESCAGTETCS
NGLEGIDGNGVVCCPLGCGQCGGKGCYKSGSANGLGGDSCCGGGIKASDE
YCDETNEAPCIIGSRPGETMRSWIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp