prot_E-siliculosus-1a_F_contig1081.569.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1081.569.1
Unique Nameprot_E-siliculosus-1a_F_contig1081.569.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1164
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1081.569.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 1132 bits (2928), Expect = 0.000e+0
Identity = 893/1110 (80.45%), Postives = 909/1110 (81.89%), Query Frame = 0 
Query:   54 ITPPAETSRRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHANSDPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKIAANDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GAEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDGSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGANKRGGRRRGGAAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXKSGGGEG-VVLEELELAGNALTLSASQAAAQAKTSSLYKSAGGALSSLLTTFVDESYYSGNSNNNRGSGQDASALTPPSLGNPAGGVAERPLRCAVAELGEALAGQGARGXXXXXXXXXXXXXXXXCSSLKAVGLARTGLTERDAARLAAALRSRPVDSPLKEVEVGLNGLSAKAAEAVRLAVESPTAPHDRSSSFDDDLENSGGRGRQRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSARRSEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLDSSAAGRGKPGRRNPASRRNFNVRGXXXXXXXXXXEPPTKIPGRRLRSSRDAGGADDGEWAAGFETVSAKEPEADCENGVDGSGAAKVEWEDGFRESRTEQGAEDSEDDEWAAGFEAVSEEAESDCEXXXXXXXXXSAEVEWEDGFRESRTE-GAEDXXXXXXXXXXXXXXEEAELNCESAMGGDGGESAEVEWEDGFREPSESRTE-GAEDSDDXXXXXXXXLASAKEAESGCESAMGSGGAXXXXXXXXXXXRKSRREQGAEDG 1156
            +TPPAE+  RSRAEP+L+VAIPP EPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRH N++PPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG  YLSSALLKSAAAAKIAANDDA            XXXXXXXXXXXXXXXX    GAEV LPPPVASGIRRLLLTGNDRLGDAGAKALASALKKD SLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVG N RGGRR  GA+KQG SSRRGPGLRS XXXXXXXXXXXXXXXXXXXXXX    GEG VVLEELELAGNALTLSASQAAAQAK+SSLYKSAGGALSSLLTTFVDESYY GNSNN RGS QDASALTPPSLGNPAGGVAERPLRCAVAELGEALAGQGARGXXXXXXXXXXXX    C SLKAVGLARTGLTERDAARLAAALR+RPVDSPL+EVEVGLNGLS KAAEA+RLAVESPTAPHDRSSSF DDLE +GGRGR   XXXXXXX                                 RSAR +EVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXXXXXXXXX GLDSSAAGRGKPG RNPASRRNFNVRGXXXXXXXXX EPPTKIPGRR RSSRDAGGADDGEWAAGFETVSA+E EAD ENG                               WAAGFEAVSEEAESDCE         SAEVEWEDGFRESRTE GAED              EEAE +CESAMGG G  SAEVEWEDGFRE   SRTE        XXXXXXX LASAKEAES CESAMGSG  XXXXXXX    R+SRREQGAE G
Sbjct:    1 MTPPAESGSRSRAEPSLAVAIPPHEPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAAKIAANDDANSPASEAPTTAGXXXXXXXXXXXXXXXXXKKGGAEVVLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGGNNRGGRRXXGASKQGISSRRGPGLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYYGGNSNN-RGSVQDASALTPPSLGNPAGGVAERPLRCAVAELGEALAGQGARGXXXXXXXXXXXXG---CPSLKAVGLARTGLTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVDEPGLRSRRGTATAAPAEE-----RSARGAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGHEGGHDDSRGGRGPAVLGSDDPENASISSAXXXXXXXXXXXXXXXXXXXXXX-GLDSSAAGRGKPGLRNPASRRNFNVRGXXXXXXXXX-EPPTKIPGRRTRSSRDAGGADDGEWAAGFETVSAEETEADPENGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRESRTEQGAEDSDDGEWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRE---SRTEQXXXXXXXXXXXXXXELASAKEAESDCESAMGSGXXXXXXXXXKAGFRESRREQGAEXG 1094
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BLAST of mRNA_E-siliculosus-1a_F_contig1081.569.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 640 bits (1651), Expect = 2.090e-215
Identity = 444/495 (89.70%), Postives = 460/495 (92.93%), Query Frame = 0 
Query:    1 MASKVWGLHGGGVKLLTSLLLALSTPQAIHCGTSAGSTAHHDRLATAATPAEDITPPAETSRRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHANSDPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKIAANDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDGSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGANKRGGRRRGGAAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXKSGGGEGVVLEELELAGNALTLSASQAAAQAK 495
            MASK   L+GGG+KLLTS+LLA+STP+AIHCGTSAGST+HHDRLATAA P  D+TPPA+TS RSRAEPALS+AIPPREP TGN PLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQ HR+ +++ PPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSA DSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKI+ANDD     XXXXXXXXXXXXXXXXXXXXXX  GAE GLPPP ASGIRRLLLTGNDR+GDAGAKALASALKKD SLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  HAGSSALECLELQGNHVGDAGAVALADGLVG +KRGGR     AKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXK G   GVVLEELELAGNALTLSASQAAAQAK
Sbjct:    1 MASKASVLNGGGLKLLTSVLLAISTPRAIHCGTSAGSTSHHDRLATAAAPPGDMTPPADTSSRSRAEPALSIAIPPREPVTGNTPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQHHRYPDTNSPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKISANDDPNNSAXXXXXXXXXXXXXXXXXXXXXXKGGAEFGLPPPAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHAGSSALECLELQGNHVGDAGAVALADGLVGGSKRGGRXXXXXAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXKGGXXGGVVLEELELAGNALTLSASQAAAQAK 495
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BLAST of mRNA_E-siliculosus-1a_F_contig1081.569.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.580e-32
Identity = 158/323 (48.92%), Postives = 187/323 (57.89%), Query Frame = 0 
Query:   89 QMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHANSDPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKIAANDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDGSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGL 411
            Q +D SFS +GP G  +     +G+ E         +   PS L L+ECSLGD G  +V  S  V    GV  LSLR N +   G R+LL  LR+A D   RL  L LDFN IGDAG QPLPA LK+ +    G LE LSLRFC I  AGCR ++SAL K    A++ A+D                                          GIR L L GN  LGDAGAKALA+ALK++ +L+ LDLTRC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G+S+++ L+L  NH+ D GA A A  L
Sbjct:   53 QFIDLSFSHVGPVGASEV---LSGLSE---------ASAAPSGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLRTAPD---RLQTLVLDFNLIGDAGLQPLPALLKDSS---NGRLESLSLRFCGISAAGCRSIASALSK----AQVNASD-----------------------------------------RGIRHLSLAGNP-LGDAGAKALAAALKQNVALEELDLTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDGASSIQRLDLDHNHIADGGAFAFARAL 311
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1081.569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY3_ECTSI0.000e+080.45Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JEB8_9PHAE2.090e-21589.70Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z931_9STRA1.580e-3248.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 357..384
e-value: 1.5E-4
score: 31.1
coord: 435..462
e-value: 7.4E-4
score: 28.8
coord: 386..413
e-value: 0.028
score: 23.6
coord: 300..328
e-value: 2.3
score: 14.5
coord: 221..248
e-value: 0.085
score: 22.0
coord: 156..183
e-value: 0.025
score: 23.7
coord: 589..616
e-value: 27.0
score: 7.0
coord: 329..356
e-value: 0.0035
score: 26.6
coord: 470..497
e-value: 42.0
score: 5.7
coord: 188..215
e-value: 21.0
score: 7.8
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 437..685
coord: 303..414
coord: 137..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..1163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.648
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 130..487
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 389..408
e-value: 0.013
score: 15.5
coord: 224..242
e-value: 0.51
score: 10.5
coord: 331..351
e-value: 9.5E-4
score: 19.0
coord: 192..209
e-value: 1.5
score: 9.1
coord: 438..457
e-value: 0.45
score: 10.7
coord: 356..379
e-value: 4.0E-4
score: 20.2
coord: 304..323
e-value: 0.41
score: 10.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 295..417
e-value: 7.3E-28
score: 98.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 129..254
e-value: 2.0E-15
score: 58.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1081contigE-siliculosus-1a_F_contig1081:15987..25135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1081.569.1mRNA_E-siliculosus-1a_F_contig1081.569.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1081 15956..26036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1081.569.1 ID=prot_E-siliculosus-1a_F_contig1081.569.1|Name=mRNA_E-siliculosus-1a_F_contig1081.569.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1164bp
MASKVWGLHGGGVKLLTSLLLALSTPQAIHCGTSAGSTAHHDRLATAATP
AEDITPPAETSRRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGP
RGLQDTDIDAAGVVEEGQQHRHANSDPPPSALSLRECSLGDLGVAEVARS
PWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNP
IGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSA
AAAKIAANDDASNPASEAPTSAGSGAGREEGEAEGEKKGGAEVGLPPPVA
SGIRRLLLTGNDRLGDAGAKALASALKKDGSLQVLDLTRCKIGDDGARCL
ANALRSNSCLRELRLGYNDISADGALALASLLHAGSSALECLELQGNHVG
DAGAVALADGLVGANKRGGRRRGGAAKQGSSSRRGPGLRSLNLAGNGIGC
AGGGALAKALVSGKSGGGEGVVLEELELAGNALTLSASQAAAQAKTSSLY
KSAGGALSSLLTTFVDESYYSGNSNNNRGSGQDASALTPPSLGNPAGGVA
ERPLRCAVAELGEALAGQGARGRGGGGGGGRGGGSGGGCSSLKAVGLART
GLTERDAARLAAALRSRPVDSPLKEVEVGLNGLSAKAAEAVRLAVESPTA
PHDRSSSFDDDLENSGGRGRQRPRRQRQQRRRRRDSAAPGGDAGEEAGLR
SRRGAAAAAAAEERSARRSEVGEYVPPGGSVELGLFGKKFASFQQAGGSG
RELDVEVFGKRVRFERTGGSPPSPRPGSSPPPSMATAEPDPWSDDDDGGG
GVDDDSDLGGVSAAATDGSASSWSSEEEEDDDDHGRGHEGGRDDSRGERR
PAVLGSDDPENTSISSAADDTEDWDDGGETSDGGGGDEERGLDSSAAGRG
KPGRRNPASRRNFNVRGGGDGGGGGGGEPPTKIPGRRLRSSRDAGGADDG
EWAAGFETVSAKEPEADCENGVDGSGAAKVEWEDGFRESRTEQGAEDSED
DEWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRESRTEGAEDSD
DGEWAAGFEQGSEEAELNCESAMGGDGGESAEVEWEDGFREPSESRTEGA
EDSDDVEWEAGFELASAKEAESGCESAMGSGGAESAEVEWEDGFRKSRRE
QGAEDGEWPEHCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt