Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10803.565.1 vs. uniprot
Match:
D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI)
HSP 1 Score: 164 bits (414), Expect = 5.100e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSXXXXXXXXXXXXLRGGAVGGPAPGFYDLGMMAMSSWKNTFIVGIHPEV 89
MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSXXXXXXXXXXXXLRGGAVGGPAPGFYDLGMMAMSSWKNTFIVGIHPEV
Sbjct: 577 MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSXXXXXXXXXXXXLRGGAVGGPAPGFYDLGMMAMSSWKNTFIVGIHPEV 665
BLAST of mRNA_E-siliculosus-1a_F_contig10803.565.1 vs. uniprot
Match:
A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)
HSP 1 Score: 154 bits (390), Expect = 8.840e-42
Identity = 79/89 (88.76%), Postives = 79/89 (88.76%), Query Frame = 0
Query: 1 MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSXXXXXXXXXXXXLRGGAVGGPAPGFYDLGMMAMSSWKNTFIVGIHPEV 89
MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSAS XXXXXX RG AVGGP PGFYDLGMMAMSSWKNTFIVGIHPEV
Sbjct: 554 MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASPSPSLSSXXXXXXRRGVAVGGPGPGFYDLGMMAMSSWKNTFIVGIHPEV 642
BLAST of mRNA_E-siliculosus-1a_F_contig10803.565.1 vs. uniprot
Match:
A0A835YZH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH2_9STRA)
HSP 1 Score: 63.9 bits (154), Expect = 6.690e-10
Identity = 42/93 (45.16%), Postives = 50/93 (53.76%), Query Frame = 0
Query: 1 MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSXXXXXXXXXXXXLRGGAVGGP----APGFYDLGMMAMSSWKNTFIVGIHPEV 89
+ FRRVMWT WV +T CLLDGAAG + ++ VL W SS GGA P AP F +MAMSS NTF+V I P+V
Sbjct: 1261 VAFRRVMWTAWVAETACLLDGAAGCMLSVDVLRGWAGVFSSAVPSVEEQGA----GGAARPPEDAVAP-FEATRLMAMSSATNTFVVSIDPQV 1348
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10803.565.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 3
M C F R R V M W T K W V V D T E C L L D G A A G P I P A L C V L P T W T D S A S S S P S S S S F G G G G G L R G G A V G G P A P G F Y D L G M M A M S S W K N T F I V G I H P E V 10 20 30 40 50 60 70 80 Expect = 5.10e-45 / Id = 100.00 Expect = 8.84e-42 / Id = 88.76 Expect = 6.69e-10 / Id = 45.16 Sequence D8LRX0_ECTSI A0A6H5JMF4_9PHAE A0A835YZH2_9STRA
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig10803.565.1 ID=prot_E-siliculosus-1a_F_contig10803.565.1|Name=mRNA_E-siliculosus-1a_F_contig10803.565.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=89bp MCFRRVMWTKWVVDTECLLDGAAGPIPALCVLPTWTDSASSSPSSSSFGG GGGLRGGAVGGPAPGFYDLGMMAMSSWKNTFIVGIHPEV back to top