Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Match:
D7FU66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU66_ECTSI)
HSP 1 Score: 103 bits (257), Expect = 3.830e-27
Identity = 65/84 (77.38%), Postives = 66/84 (78.57%), Query Frame = 0
Query: 1 MRTSSDSSARDGDLAREEGRGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYGPQGASFSRACGPDSVYTRTTTPGAETIL 84
MRTSS SARDG LAREEG GSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYG + SVYTRTT P AETIL
Sbjct: 1 MRTSS-GSARDGGLAREEGTGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYGSKAYHALERAAQASVYTRTTAPAAETIL 83
BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Match:
A0A6H5LE70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE70_9PHAE)
HSP 1 Score: 80.1 bits (196), Expect = 1.690e-16
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0
Query: 4 SSDSSARDGDLAREEGRGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYG 56
SSDSSARDG LAREEGRGSMGGSSR GSSARTLAAGLALTLAACSTPAYG
Sbjct: 3 SSDSSARDGGLAREEGRGSMGGSSRXXXXGSSARTLAAGLALTLAACSTPAYG 55
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M R T S S D S S A R D G D L A R E E G R G S M G G S S R R R R R G S S A R T L A A G L A L T L A A C S T P A Y G P Q G A S F S R A C G P D S V Y T R T T T P G A E T I L V W S L S I * 10 20 30 40 50 60 70 80 90 Expect = 3.83e-27 / Id = 77.38 Expect = 1.69e-16 / Id = 90.57 Sequence D7FU66_ECTSI A0A6H5LE70_9PHAE
Match Name E-value Identity Description
D7FU66_ECTSI 3.830e-27 77.38 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5LE70_9PHAE 1.690e-16 90.57 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M R T S S D S S A R D G D L A R E E G R G S M G G S S R R R R R G S S A R T L A A G L A L T L A A C S T P A Y G P Q G A S F S R A C G P D S V Y T R T T T P G A E T I L V W S L S I * 10 20 30 40 50 60 70 80 90 Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 38..56 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 57..90 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..37 None No IPR available TMHMM TMhelix coord: 33..55
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1079.551.1 ID=prot_E-siliculosus-1a_F_contig1079.551.1|Name=mRNA_E-siliculosus-1a_F_contig1079.551.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=91bp back to top