Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.496.1 vs. uniprot
Match:
D7FIZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ7_ECTSI)
HSP 1 Score: 544 bits (1401), Expect = 3.470e-195
Identity = 279/283 (98.59%), Postives = 282/283 (99.65%), Query Frame = 0
Query: 1 MAMAQKPGKLVLKALAALVPLMVLIGVSTSGNGMNGATSKAVDGAGRRLQTATYDFATQLEMTICLTEEHTSDSATSTTDQLKVAVMEIFGIESADDVVVDDSLTRCTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPGALTTAFLDDIATSINAQDSELVFTGTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAELDSYGGGSAGKDMGAPAPPSATSSNPYGGNYSAEEHKSGK 283
MAMAQKPGKLVLKALAAL+PLMVLIGVSTSGNGMNGATSKAVDGAGRRLQTATYDFATQLEMTICLTEEHTSDSATSTTDQLKVAVMEIFGIESADDVVVDDSLTRCTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPGALTTAFLDDIATSINAQD+ELVFTGTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAELDSYGGGS GKDMGAPAPPSATSSNPYGGNYSAEE+KSGK
Sbjct: 1 MAMAQKPGKLVLKALAALIPLMVLIGVSTSGNGMNGATSKAVDGAGRRLQTATYDFATQLEMTICLTEEHTSDSATSTTDQLKVAVMEIFGIESADDVVVDDSLTRCTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPGALTTAFLDDIATSINAQDAELVFTGTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAELDSYGGGS-GKDMGAPAPPSATSSNPYGGNYSAEENKSGK 282
BLAST of mRNA_E-siliculosus-1a_F_contig107.496.1 vs. uniprot
Match:
A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)
HSP 1 Score: 70.9 bits (172), Expect = 5.170e-10
Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 0
Query: 80 DQLKVAVMEIFGIESADDVVVDDSLTR------CTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPGALTTAFLDDIATSINAQDSELVFTGTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPM 229
D L+ +M++F +E ++ + C + + ++I N +T SAA I++ Q++ + TT +A+S+ +DS L L SLG++V++ D + V + D V G D WWPW L++ V+LCCICP+
Sbjct: 228 DALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDDGSEEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTL----LASSL--EDSNLSVNPAGLTYSSLGYIVLY-DEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPL 376
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.496.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M A M A Q K P G K L V L K A L A A L V P L M V L I G V S T S G N G M N G A T S K A V D G A G R R L Q T A T Y D F A T Q L E M T I C L T E E H T S D S A T S T T D Q L K V A V M E I F G I E S A D D V V V D D S L T R C T V D N W Q R R V S I Y N R A D E T G S A A D I A S A Q V D Q I Y P G A L T T A F L D D I A T S I N A Q D S E L V F T G T D L D L L S L G F L V I W L D S N G D V V D N Q G T T T S K D V V N I G G T D V W W P W W A W L I Y A A V V L C C I C P M L F F F F K W R R D K E A E L D S Y G G G S A G K D M G A P A P P S A T S S N P Y G G N Y S A E E H K S G K * 20 40 60 80 100 120 140 160 180 200 220 240 260 280 Expect = 3.47e-195 / Id = 98.59 Expect = 5.17e-10 / Id = 28.21 Sequence D7FIZ7_ECTSI A0A6H5JL50_9PHAE
Match Name E-value Identity Description
D7FIZ7_ECTSI 3.470e-195 98.59 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more] A0A6H5JL50_9PHAE 5.170e-10 28.21 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M A M A Q K P G K L V L K A L A A L V P L M V L I G V S T S G N G M N G A T S K A V D G A G R R L Q T A T Y D F A T Q L E M T I C L T E E H T S D S A T S T T D Q L K V A V M E I F G I E S A D D V V V D D S L T R C T V D N W Q R R V S I Y N R A D E T G S A A D I A S A Q V D Q I Y P G A L T T A F L D D I A T S I N A Q D S E L V F T G T D L D L L S L G F L V I W L D S N G D V V D N Q G T T T S K D V V N I G G T D V W W P W W A W L I Y A A V V L C C I C P M L F F F F K W R R D K E A E L D S Y G G G S A G K D M G A P A P P S A T S S N P Y G G N Y S A E E H K S G K * 20 40 60 80 100 120 140 160 180 200 220 240 260 280 Score = Score = Score = Score = Score = Score = Score = Score = 0.664 Score = Score = Score = Sequence SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_C_REGION TRANSMEMBRANE SIGNAL_PEPTIDE_H_REGION SignalP-noTM TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..13 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 30..211 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..29 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 235..283 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 26..29 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 212..234 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 14..25 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..30 None No IPR available TMHMM TMhelix coord: 212..234 None No IPR available TMHMM TMhelix coord: 10..32 None No IPR available TMHMM TMhelix coord: 163..182
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig107.496.1 ID=prot_E-siliculosus-1a_F_contig107.496.1|Name=mRNA_E-siliculosus-1a_F_contig107.496.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=284bp back to top