prot_E-siliculosus-1a_F_contig10665.474.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10665.474.1
Unique Nameprot_E-siliculosus-1a_F_contig10665.474.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length293
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10665.474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 94..230
e-value: 1.4E-10
score: 41.0
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 110..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10665contigE-siliculosus-1a_F_contig10665:603..1481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10665.474.1mRNA_E-siliculosus-1a_F_contig10665.474.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10665 450..2085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10665.474.1 ID=prot_E-siliculosus-1a_F_contig10665.474.1|Name=mRNA_E-siliculosus-1a_F_contig10665.474.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=293bp
MRSWEQEVLDSFFDIARQQQREILKDVPVRDSAMNMRRERFCLALMKDTP
SAGDAWHLEIRSFRSGVCMYVLRITRGLGGSITYLVGLIALRTFSRRLTR
CPPYPNCFPFRSRYEYSLRHLCGLEGKRMAYRPQSCARIASVGWGGSGEG
GYGHGCPYHSRRKQAGGGGSGSGQSMAGGSNDTSLRGMLVAQSLPAADIE
DIIAPLESCRGAGAVGACRRHFSATHRWAAAGGGVWRTEGEGAQEASPNG
WLAASTRSNQQQPQQQQLLRQRPQQQQPVGKGEFLSQEGQGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc