Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Start | 1 |
Stop | 1 |
Cds size | 879 |
Model size | 1636 |
Exons | 1 |
Ec32 ortholog | Ec-18_001420.2 |
Ec32 ortholog description | DNA primase large subunit, eukaryotic/archaeal |
Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927568.261728-CDS-E-siliculosus-1a_F_contig10665:602..1481 | 1622927568.261728-CDS-E-siliculosus-1a_F_contig10665:602..1481 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10665 603..1481 + |
1696318589.5219681-CDS-E-siliculosus-1a_F_contig10665:602..1481 | 1696318589.5219681-CDS-E-siliculosus-1a_F_contig10665:602..1481 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10665 603..1481 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10665.474.1 >prot_E-siliculosus-1a_F_contig10665.474.1 ID=prot_E-siliculosus-1a_F_contig10665.474.1|Name=mRNA_E-siliculosus-1a_F_contig10665.474.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=293bp
MRSWEQEVLDSFFDIARQQQREILKDVPVRDSAMNMRRERFCLALMKDTP SAGDAWHLEIRSFRSGVCMYVLRITRGLGGSITYLVGLIALRTFSRRLTR CPPYPNCFPFRSRYEYSLRHLCGLEGKRMAYRPQSCARIASVGWGGSGEG GYGHGCPYHSRRKQAGGGGSGSGQSMAGGSNDTSLRGMLVAQSLPAADIE DIIAPLESCRGAGAVGACRRHFSATHRWAAAGGGVWRTEGEGAQEASPNG WLAASTRSNQQQPQQQQLLRQRPQQQQPVGKGEFLSQEGQGV* back to topmRNA from alignment at E-siliculosus-1a_F_contig10665:450..2085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10665.474.1 ID=mRNA_E-siliculosus-1a_F_contig10665.474.1|Name=mRNA_E-siliculosus-1a_F_contig10665.474.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1636bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10665:450..2085+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) GGTAGATTAGGCGGAGAACATTCGCACTTGGGATTGACACGTAGGTCGTG
CAGCTTCGTTCTACTGATTCTGGAACCCGTTGGTAGTATGGGCGGCTCAG
CAATTCGCCCTCGCAAATAGCAGGCCGATGTAGCGCTAGCAACGTATGTG
GGAATGAGAAGTTGGGAACAGGAGGTGCTGGATAGTTTTTTCGACATCGC
ACGGCAACAACAACGGGAGATATTGAAGGACGTTCCTGTTAGGGATTCCG
CGATGAACATGCGCCGGGAGCGCTTTTGCTTGGCACTGATGAAAGACACA
CCAAGCGCGGGAGACGCTTGGCACTTAGAAATTCGCAGCTTTCGTTCTGG
TGTGTGCATGTATGTCCTGCGGATAACACGTGGTCTAGGAGGAAGTATCA
CCTATCTCGTGGGTTTGATTGCATTACGAACGTTTAGTAGGAGGCTGACG
CGTTGCCCGCCCTACCCAAACTGTTTTCCGTTCCGTTCCAGATACGAATA
CAGTCTTCGACACCTGTGTGGCCTGGAGGGAAAGCGTATGGCATACCGCC
CTCAGTCCTGCGCCCGAATCGCCTCCGTGGGATGGGGTGGCTCGGGCGAA
GGGGGCTACGGCCACGGCTGCCCGTACCACTCTCGCCGGAAACAGGCAGG
TGGCGGCGGCAGCGGTAGCGGGCAATCAATGGCCGGCGGCTCGAACGACA
CCAGCCTTCGAGGTATGCTAGTGGCCCAAAGTCTTCCTGCAGCAGACATT
GAAGACATCATCGCCCCTCTGGAAAGCTGTCGGGGGGCAGGGGCGGTGGG
GGCATGTCGAAGACACTTTTCGGCGACACACCGTTGGGCGGCGGCTGGCG
GAGGCGTGTGGAGGACGGAGGGCGAAGGGGCTCAGGAGGCAAGTCCAAAC
GGGTGGCTAGCGGCATCGACGAGGTCAAACCAACAGCAGCCGCAGCAGCA
GCAGCTGCTACGACAACGGCCACAGCAGCAGCAGCCGGTGGGAAAGGGAG
AGTTTCTATCGCAGGAGGGCCAGGGTGTTTAGGCTAATAGATTTACCTCA
CGGCCTTGTCAACGAGTTACCAACAAGTGGCTGGGAAGACCGCACGTCTT
GTTCGGTCTAAGCCGCAGGCACCTTGTCGGACGATGTAAAAAAGCACGAC
TTCCCCCCAGTTGTACAATAGTGGTGCAGCCTCGTAAGCTTGTGCAACGA
GCGGATGCTTCCCGCTGATACTATCGGTTCGTTGTGGACATATTCCTCCT
AACGTGGAATTCCCAGCACATACTAGCCAAATTGCAAAATTGTTGGTTGC
AGCGGTAGGGGGATGGAATCTGTTTGTTCAGTTGAAACGCTAGTAGAATC
TGAAAACCCTTCGAGAATGAACGGCATGCCCGAATTCTACCCGATCATAC
GATCGCACTTGGCTCCGAAGAAGCTCCAAGAGGTCCAGCTTGCGTCGGGC
TCAAATCTTGGTCGATCACAAATCTCGAGCTTAGGCTTGAATAGCGGATT
TAGCGCCGGATCCACCGCGAGCTGTGTTCTCAGCCATGTTCTCCTGCTCG
GGAATGGTTGCTCTGTATGGCATTCGACACTCACGGTCATCACCCACGGG
GGGGGGGGGTATTCTGTCTCGTTCTTCATCCAAGGG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10665:450..2085+ >mRNA_E-siliculosus-1a_F_contig10665.474.1 ID=mRNA_E-siliculosus-1a_F_contig10665.474.1|Name=mRNA_E-siliculosus-1a_F_contig10665.474.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1758bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10665:450..2085+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGAGAAGTTGGGAACAGGAGGTGCTGGATAGTTTTTTCGACATCGCACG GCAACAACAACGGGAGATATTGAAGGACGTTCCTGTTAGGGATTCCGCGA TGAACATGCGCCGGGAGCGCTTTTGCTTGGCACTGATGAAAGACACACCA AGCGCGGGAGACGCTTGGCACTTAGAAATTCGCAGCTTTCGTTCTGGTGT GTGCATGTATGTCCTGCGGATAACACGTGGTCTAGGAGGAAGTATCACCT ATCTCGTGGGTTTGATTGCATTACGAACGTTTAGTAGGAGGCTGACGCGT TGCCCGCCCTACCCAAACTGTTTTCCGTTCCGTTCCAGATACGAATACAG TCTTCGACACCTGTGTGGCCTGGAGGGAAAGCGTATGGCATACCGCCCTC AGTCCTGCGCCCGAATCGCCTCCGTGGGATGGGGTGGCTCGGGCGAAGGG GGCTACGGCCACGGCTGCCCGTACCACTCTCGCCGGAAACAGGCAGGTGG CGGCGGCAGCGGTAGCGGGCAATCAATGGCCGGCGGCTCGAACGACACCA GCCTTCGAGGTATGCTAGTGGCCCAAAGTCTTCCTGCAGCAGACATTGAA GACATCATCGCCCCTCTGGAAAGCTGTCGGGGGGCAGGGGCGGTGGGGGC ATGTCGAAGACACTTTTCGGCGACACACCGTTGGGCGGCGGCTGGCGGAG GCGTGTGGAGGACGGAGGGCGAAGGGGCTCAGGAGGCAAGTCCAAACGGG TGGCTAGCGGCATCGACGAGGTCAAACCAACAGCAGCCGCAGCAGCAGCA GCTGCTACGACAACGGCCACAGCAGCAGCAGCCGGTGGGAAAGGGAGAGT TTCTATCGCAGGAGGGCCAGGGTGTTTAGATGAGAAGTTGGGAACAGGAG GTGCTGGATAGTTTTTTCGACATCGCACGGCAACAACAACGGGAGATATT GAAGGACGTTCCTGTTAGGGATTCCGCGATGAACATGCGCCGGGAGCGCT TTTGCTTGGCACTGATGAAAGACACACCAAGCGCGGGAGACGCTTGGCAC TTAGAAATTCGCAGCTTTCGTTCTGGTGTGTGCATGTATGTCCTGCGGAT AACACGTGGTCTAGGAGGAAGTATCACCTATCTCGTGGGTTTGATTGCAT TACGAACGTTTAGTAGGAGGCTGACGCGTTGCCCGCCCTACCCAAACTGT TTTCCGTTCCGTTCCAGATACGAATACAGTCTTCGACACCTGTGTGGCCT GGAGGGAAAGCGTATGGCATACCGCCCTCAGTCCTGCGCCCGAATCGCCT CCGTGGGATGGGGTGGCTCGGGCGAAGGGGGCTACGGCCACGGCTGCCCG TACCACTCTCGCCGGAAACAGGCAGGTGGCGGCGGCAGCGGTAGCGGGCA ATCAATGGCCGGCGGCTCGAACGACACCAGCCTTCGAGGTATGCTAGTGG CCCAAAGTCTTCCTGCAGCAGACATTGAAGACATCATCGCCCCTCTGGAA AGCTGTCGGGGGGCAGGGGCGGTGGGGGCATGTCGAAGACACTTTTCGGC GACACACCGTTGGGCGGCGGCTGGCGGAGGCGTGTGGAGGACGGAGGGCG AAGGGGCTCAGGAGGCAAGTCCAAACGGGTGGCTAGCGGCATCGACGAGG TCAAACCAACAGCAGCCGCAGCAGCAGCAGCTGCTACGACAACGGCCACA GCAGCAGCAGCCGGTGGGAAAGGGAGAGTTTCTATCGCAGGAGGGCCAGG GTGTTTAG back to top
|