prot_E-siliculosus-1a_F_contig10661.473.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10661.473.1
Unique Nameprot_E-siliculosus-1a_F_contig10661.473.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length213
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10661.473.1 vs. uniprot
Match: A0A6H5KZL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL3_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.490e-52
Identity = 101/106 (95.28%), Postives = 102/106 (96.23%), Query Frame = 0 
Query:    2 KLKEGLEQAAGAATGTAGKKTPAKGKKAAAGAAAKENGSTPSKVTLDGTQHAKLVDDVAAKVYGLIEPRLMAMAHYIVGTVSGSKPAATPPDPTPIRRSKKAPSKS 107
            KLKEGLEQAAGAATGTAGKKTPAKGKKA AGAA KENGSTPSKVTLDGTQHAKLVDDVAAKVYGLIEPRLMAMA YIV TVSGS+PAATPPDPTPIRRSKKAPSKS
Sbjct:  316 KLKEGLEQAAGAATGTAGKKTPAKGKKATAGAADKENGSTPSKVTLDGTQHAKLVDDVAAKVYGLIEPRLMAMAQYIVRTVSGSQPAATPPDPTPIRRSKKAPSKS 421
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BLAST of mRNA_E-siliculosus-1a_F_contig10661.473.1 vs. uniprot
Match: D7G7X2_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X2_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 9.900e-40
Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:   45 VTLDGTQHAKLVDDVAAKVYGLIEPRLMAMAHYIVGTVSGSKPAATPPDPTPIRRSKKAPSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPKKQTLAATDMNQQAVPPAAA 167
            VTLDGTQHAKLVDDVAAKVYGLIEPRLMAMA YIVGTVS +KPAATPPDPTPIRRSKKAPSKS XXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXRGRP+KQTLAATD+NQQAVP AAA
Sbjct:    6 VTLDGTQHAKLVDDVAAKVYGLIEPRLMAMAKYIVGTVSATKPAATPPDPTPIRRSKKAPSKSSXXXXXXEIPXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPRKQTLAATDINQQAVPRAAA 128
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10661.473.1 vs. uniprot
Match: A0A6H5K6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6A7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.940e-12
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   44 KVTLDGTQHAKLVDDVAAKVYGLIEPRLMAMAHYIVGTVSGSKP 87
            K +LDGTQHA LVDDVAAKVYGLIEPRLMAMA YIVGTVS + P
Sbjct:  245 KESLDGTQHATLVDDVAAKVYGLIEPRLMAMAQYIVGTVSAAPP 288
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10661.473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZL3_9PHAE1.490e-5295.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7X2_ECTSI9.900e-4091.87Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5K6A7_9PHAE2.940e-1284.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10661contigE-siliculosus-1a_F_contig10661:389..1575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10661.473.1mRNA_E-siliculosus-1a_F_contig10661.473.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10661 369..2252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10661.473.1 ID=prot_E-siliculosus-1a_F_contig10661.473.1|Name=mRNA_E-siliculosus-1a_F_contig10661.473.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=213bp
MKLKEGLEQAAGAATGTAGKKTPAKGKKAAAGAAAKENGSTPSKVTLDGT
QHAKLVDDVAAKVYGLIEPRLMAMAHYIVGTVSGSKPAATPPDPTPIRRS
KKAPSKSSRSKKHREVPSPSPSSTDPSSSSSDAETPSPPKKQKRGRPKKQ
TLAATDMNQQAVPPAAAQPMQAPAHAYYGVPPGFHAAPRLPPAASAASFI
PQNSSWMMHNLF*
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