prot_E-siliculosus-1a_F_contig1066.470.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1066.470.1
Unique Nameprot_E-siliculosus-1a_F_contig1066.470.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length422
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1066.470.1 vs. uniprot
Match: A0A6H5KZS0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS0_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 2.680e-161
Identity = 329/422 (77.96%), Postives = 346/422 (81.99%), Query Frame = 0
Query:    1 MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVGAGGGSAATVPAAGTLGKNKSSNIMINSNESGENQRKQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDYVDSMMLEEGFEGGGSAAISEDDLSYLADMDLADFLPAGGVEGASDAGTGGGGGAPLSPSSAHEIETLPNHMAGGGEVSAPVMTXXXXXXXXXXXXXXX-GGVIGSPVAGGGAEVSGVGDVSPVRSXXXXXXXXXXXXXXXEVVAAPGVNVDGGGAARRKGXXXXXXXXXXXXXXXXXXXXXXXXXTVSVKEQVRRQKVARYLAKKQRRRWSKASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRKRVLMAQMREKAAAATAXXXXXXXXXXXXXXXXGAPCGDGVPSSPEFGHQYTV 421
            MH+DETII+MYAPF ACSGAHRP++GTVDSS RKINAGGNNGNSEVGAGGGS ATVPAAGTL KNK+S I+I  NESGEN  KQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDY DSMMLEEG EG G AAISE+ L+YLADMDLADFLPAG  +GAS+AGTG    AP SPSS HEIE LP+ +AGG         XXXXXXXXXXXXXXX GGV+GSPVAGGGAEVSGVGDVSP+RS               EVVAAPGVN DG        XXXXXXXXXXXXXX            VS+KEQVRRQKVARYLAKKQRRRWSKAS YQSRQRVANSRPRHKGRFLPLESEFVPIAE+QRR+RVLMAQMREKAAAATAXXXXXXXXXXXXXXX GA  GDGVP SPE GHQYTV
Sbjct:    1 MHDDETIINMYAPFRACSGAHRPLKGTVDSSRRKINAGGNNGNSEVGAGGGSTATVPAAGTLCKNKNS-IIITENESGEN--KQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDYGDSMMLEEGCEGEGGAAISEEGLAYLADMDLADFLPAGSAKGASNAGTGXXXXAPRSPSSDHEIEILPDIVAGGXXXXXXXXXXXXXXXXXXXXXXXXXGGVMGSPVAGGGAEVSGVGDVSPIRSVAAAAVAAV------EVVAAPGVNADGXXXXXXXXXXXXXXXXXXXXXXDWDGGDDDADAIVSLKEQVRRQKVARYLAKKQRRRWSKASCYQSRQRVANSRPRHKGRFLPLESEFVPIAEVQRRQRVLMAQMREKAAAATAXXXXXXXXXXXXXXXAGARYGDGVPLSPESGHQYTV 413          
BLAST of mRNA_E-siliculosus-1a_F_contig1066.470.1 vs. uniprot
Match: D7G0D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D0_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 5.230e-96
Identity = 160/199 (80.40%), Postives = 165/199 (82.91%), Query Frame = 0
Query:    1 MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVGAGGGSAATVPAAGTLGKNKSSNIMINSNESGENQRKQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDYVDSMMLEEGFEGGGSAAISEDDLSYLADMDLADFLPAGGVEGASDAGTGGGGGAPLSPSSAHEIETLPNHMAGGGEVSA 199
            MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVG              LGK           ESGENQRKQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDY DSMMLEEG EGGG AAISE+DL+YLADMDLADFLPAG  EGA +AGT  GGGAPLSPSSAHEIETLP+H+AGGGE SA
Sbjct:    1 MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVGXXXXXXXXXXXXXXLGKXXXXXXXXXXXESGENQRKQLDSMDVGLNVSGEGDIADNVDGFLDEFIALAGDDDYGDSMMLEEGCEGGGGAAISEEDLAYLADMDLADFLPAGAAEGAPEAGTSAGGGAPLSPSSAHEIETLPDHVAGGGEASA 199          
BLAST of mRNA_E-siliculosus-1a_F_contig1066.470.1 vs. uniprot
Match: A0A6H5KKD0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD0_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.710e-56
Identity = 212/391 (54.22%), Postives = 233/391 (59.59%), Query Frame = 0
Query:    1 MHNDETIISMYAPFWACSGAHRPVE-GTVDS-SDRKINAGGNNGNSEVGAGGGSAATVPAAGTLGKNKSSNIMINSNESGENQRKQLDSMDVGLNVSG-EGDIADNVDGFLDEFIALAGDDDYVDSMMLEEGFEGGGSAAISEDDLSYLADMDLADFLPAGGVEGASDAGTGGGGGAPLSPSSAHEIETLPNHMAGGGEVSAPVMTXXXXXXXXXXXXXXXGGVIGSPVAGGGAEVSGVGDVSPVRSXXXXXXXXXXXXXXXEVVAAPGVNVDGGGAARRKGXXXXXXXXXXXXXXXXXXXXXXXXXT-VSVKEQVRRQKVARYLAKKQRRRWSK--ASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRKRVLMAQMREKAAAATA 385
            MH+DETI  M+APFWA SGAHRPVE  TV+  S RK N+                A                                     + V G +GDIADNVDGFLDEF+ LAG +D  +   +          AISE+DL +LADMDLADFLP         A T   G A LSPSS HE+ETLP+    GG V++PVMT                           AE +    + P   XXXXXXXXXXXXXXX V  APGV  DG GAAR   XXXXXXXXXXXXXXXXXXXXXXXXX  +S KEQVRRQKVARYLAKKQRR WSK  ASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRR+R LM QMREKAAA+ A
Sbjct:    1 MHDDETI-GMHAPFWAFSGAHRPVEESTVNGGSGRKTNS----------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDVVVGGHDGDIADNVDGFLDEFMVLAGGNDDGNDYGMXXXXXXXXXPAISEEDLVFLADMDLADFLP--------PAITAEEGDALLSPSSVHEMETLPSQ---GGRVASPVMTAA-------------------------AEAT----LGPAXXXXXXXXXXXXXXXXXAV--APGVETDGRGAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISPKEQVRRQKVARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMREKAAASAA 332          
BLAST of mRNA_E-siliculosus-1a_F_contig1066.470.1 vs. uniprot
Match: D8LIC1_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC1_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.660e-55
Identity = 241/433 (55.66%), Postives = 258/433 (59.58%), Query Frame = 0
Query:    1 MHNDETIISMYAPFWACSGAHRPVE-GTVDSSD--RKINAGGNNGNSEVGAGGGSAATVPA-AGTLGKNKSSNIMINSNESGENQRKQLDSMDVGLNVSG-EGDIADNVDGFLDEFIALAGDDDYVDSMMLEEGFEGGGSAAISEDDLSYLADMDLADFLPAGGVEGASDAGTGGGGGAPLSPSSAHEIETLPNHMAGGGEVSAPVMTXXXXXXXXXXXXXXXGGVIGSPVAGGGAEVSGVGDVSPVRSXXXXXXXXXXXXXXXEVVAAPGVNVDGGGAARRKGXXXXXXXXXXXXXXXXXXXXXXXXXTVSVKEQVRRQKVARYLAKKQRRRWSK--ASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRKRVLMAQMREKAAAATAXXXXXXXXXXXXXXXXG-----APCGDGVPSSPEFGHQYTV 421
            MH+DETI +M+APFWA SGAHRPVE  TVDSS   RK N           AGGG A      AG                 G+      D +     V+G EGDIADNVDGFLDEF+ALAG +D    MMLE         AISE+DL +LADMDLADFLP         A T   GGA LSPSS HE+ET+P+    GG VS     XXXXXXXXXXXXXXX                                XXXXXXXXX                    XXXXXXXXXXXXXXXXXXXXXXXXX +S+KEQVRRQKVARYLAKKQRR WSK  ASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRR+R LM QMREKAAAA    XXX  XXXXXXX  G     AP G GVP   EF  Q T+
Sbjct:    1 MHDDETI-AMHAPFWAFSGAHRPVEESTVDSSSSGRKANN----------AGGGIANKYSIEAGXXXXXXXXXXXXXXXXPGKGSSGGRDVV-----VNGHEGDIADNVDGFLDEFMALAGGNDEDYGMMLEXXXXX--XPAISEEDLVFLADMDLADFLP--------PATTAEDGGALLSPSSVHEMETVPSE---GGGVSXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISLKEQVRRQKVARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMREKAAAAATAEXXXGPXXXXXXXARGTAAVGAPYGAGVPPPQEFSSQCTI 372          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1066.470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KZS0_9PHAE2.680e-16177.96CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0D0_ECTSI5.230e-9680.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKD0_9PHAE1.710e-5654.22CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LIC1_ECTSI1.660e-5555.66CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..382
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 80..352
IPR010402CCT domainPFAMPF06203CCTcoord: 313..353
e-value: 6.1E-14
score: 51.8
IPR010402CCT domainPROSITEPS51017CCTcoord: 313..355
score: 11.33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1066contigE-siliculosus-1a_F_contig1066:7218..8483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1066.470.1mRNA_E-siliculosus-1a_F_contig1066.470.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1066 4816..9622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1066.470.1 ID=prot_E-siliculosus-1a_F_contig1066.470.1|Name=mRNA_E-siliculosus-1a_F_contig1066.470.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=422bp
MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVGAGG
GSAATVPAAGTLGKNKSSNIMINSNESGENQRKQLDSMDVGLNVSGEGDI
ADNVDGFLDEFIALAGDDDYVDSMMLEEGFEGGGSAAISEDDLSYLADMD
LADFLPAGGVEGASDAGTGGGGGAPLSPSSAHEIETLPNHMAGGGEVSAP
VMTAAAAPPPPLAAAGGQGGVIGSPVAGGGAEVSGVGDVSPVRSVAATAA
AAVAAVAAVEVVAAPGVNVDGGGAARRKGKGKHQDAASAAAVTDWDGGDD
DADATVSVKEQVRRQKVARYLAKKQRRRWSKASSYQSRQRVANSRPRHKG
RFLPLESEFVPIAELQRRKRVLMAQMREKAAAATAAATAGSASAAAGSAA
AGAPCGDGVPSSPEFGHQYTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain