prot_E-siliculosus-1a_F_contig105.360.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig105.360.1
Unique Nameprot_E-siliculosus-1a_F_contig105.360.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length156
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: D8LSE4_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE4_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 2.170e-101
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0
Query:    1 MRPVLNLFFLFGSSVGFYANPMMRRVAVSSFAGSTIVRAASATALPSQRQAKFTTSMNSVDFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155
            MRPVLNLFFLFGSSVGFYANPMMRRVAVSSFAGSTIVRAASATA PSQRQAKFTTSMNSVDFVEKEID NNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG
Sbjct:    1 MRPVLNLFFLFGSSVGFYANPMMRRVAVSSFAGSTIVRAASATAFPSQRQAKFTTSMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A835YTN8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.220e-34
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0
Query:   61 DFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155
            DFV+++I   ++VVFSKSYCP+C +TK LF  L   ATV ELDQ DDG  IQA L   TGQ TVPNVFVKGTHVGGNDA Q ANS G LK+L++G
Sbjct:   66 DFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNG 160          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A168RTQ5_ABSGL (Glutaredoxin domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168RTQ5_ABSGL)

HSP 1 Score: 120 bits (300), Expect = 1.970e-32
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 0
Query:   63 VEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            V+  I  N VV+FSKSYCP+C+ TKNLF  LGV+A V ELDQ+DDG AIQ  L  KTGQ TVPNVFV   HVGGN  VQAANS+G+L+ LL
Sbjct:    9 VDSLIKNNKVVIFSKSYCPYCSATKNLFKQLGVEAVVLELDQIDDGAAIQDYLQKKTGQRTVPNVFVAQQHVGGNSDVQAANSNGSLEKLL 99          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A1Z5KQE3_FISSO (Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQE3_FISSO)

HSP 1 Score: 120 bits (302), Expect = 4.030e-32
Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   40 ASATALPSQRQAKFTT---SMNSVDFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            A+A A+ +Q  + + T     +  DF+  EI+ N V +FSKSYCPFC++TK  FA LGVDA ++EL+QMDDG  IQ  L   TGQ TVPNVFV G H+GGND  Q A +SG +K LL
Sbjct:   30 AAANAIVTQPSSNYLTVRHMASKTDFITSEINSNQVTIFSKSYCPFCSKTKASFAELGVDAKIFELNQMDDGADIQDTLFEMTGQKTVPNVFVNGKHIGGNDDTQKAIASGEMKKLL 146          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A7S1CWF6_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CWF6_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 4.800e-32
Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 0
Query:   63 VEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 154
            V+  I   +VVVFSKS+CPFC +TK LF  LGVDA +YELDQ DDG  IQA L   TGQ+TVPNVF+KG H+GGND  Q AN+SG L  +L+
Sbjct:   50 VDDAIKAKDVVVFSKSFCPFCAKTKTLFRELGVDADIYELDQRDDGSEIQATLKEMTGQSTVPNVFIKGEHLGGNDDTQQANASGELAKMLE 141          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A1X2GSF3_9FUNG (Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF3_9FUNG)

HSP 1 Score: 119 bits (298), Expect = 5.020e-32
Identity = 58/92 (63.04%), Postives = 68/92 (73.91%), Query Frame = 0
Query:   63 VEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 154
            VE+ I  N +V+FSK+YCP+CT TK LF  LG DAT+ ELD  +DG AIQ  L  KTGQ TVPNVFVK  H+GGND VQAAN +G LK LL+
Sbjct:   16 VEELIANNKIVIFSKTYCPYCTSTKTLFKKLGQDATIIELDTRNDGSAIQNYLLTKTGQRTVPNVFVKQQHIGGNDNVQAANGNGTLKKLLE 107          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A7S3NI43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.080e-31
Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 0
Query:   63 VEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            ++  I  N+VV+FSKSYCPFC +TK LF  L VDA +YELDQ DDG  IQ+ L  KTGQ+TVPNVF+KG H+GGND  Q A++SG L  LL
Sbjct:   43 IDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A7S2R353_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R353_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.520e-31
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0
Query:   61 DFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 154
            DFV++EI  N+VVVFSKS+CPFC +TK+L  G+ +D T  EL+QMDDG  IQ  L   +GQ TVPNVFVKG H+GGND  Q A  SGALKT+L+
Sbjct:   65 DFVKQEIANNDVVVFSKSFCPFCKKTKSLLDGMDIDYTALELNQMDDGADIQDALMDLSGQRTVPNVFVKGNHLGGNDDAQKAAKSGALKTMLE 158          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A1Z5KSJ8_FISSO (Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSJ8_FISSO)

HSP 1 Score: 117 bits (294), Expect = 1.600e-31
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 0
Query:   61 DFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            DF++KE D + VVV+SKSYCP+CT TKNLF  L V   V+ELDQM +G  IQA L   TGQ TVPNVF+KG H+GGND  QAA+ SG L+ LL
Sbjct:    6 DFIQKEHDASPVVVWSKSYCPYCTATKNLFQKLNVPHKVHELDQMSNGNDIQAALQQMTGQRTVPNVFIKGKHLGGNDDTQAAHRSGHLQQLL 98          
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Match: A0A7S2L780_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L780_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.370e-30
Identity = 72/131 (54.96%), Postives = 82/131 (62.60%), Query Frame = 0
Query:   26 VAVSSFAGSTIVRAASATALPSQRQAKFTTSMNSVD---FVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 153
            VA  S   ST VR  S T       +  + SM+S D   FV  EI  N+VVVFSK+YCPFCT TK LF  L VDA V ELD +D+G  IQ  L  KTGQ TVP+VF+KG H+GGNDA QAA  SG L T L
Sbjct:   24 VASGSNKPSTFVRNVSGTV--GSASSTTSLSMSSTDSAAFVLAEIGSNDVVVFSKTYCPFCTSTKTLFEKLNVDAKVVELDTLDNGADIQGALLDKTGQRTVPSVFIKGEHIGGNDATQAAFQSGDLFTKL 152          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig105.360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE4_ECTSI2.170e-10198.71Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YTN8_9STRA1.220e-3465.26Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A168RTQ5_ABSGL1.970e-3265.93Glutaredoxin domain-containing protein n=1 Tax=Abs... [more]
A0A1Z5KQE3_FISSO4.030e-3252.99Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S1CWF6_9CHLO4.800e-3261.96Hypothetical protein n=1 Tax=Picochlorum oklahomen... [more]
A0A1X2GSF3_9FUNG5.020e-3263.04Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxI... [more]
A0A7S3NI43_9STRA1.080e-3161.54Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2R353_9STRA1.520e-3161.70Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5KSJ8_FISSO1.600e-3162.37Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S2L780_9STRA1.370e-3054.96Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 117..130
score: 49.4
coord: 131..144
score: 31.25
coord: 72..90
score: 49.56
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 72..152
e-value: 4.6E-29
score: 98.4
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 72..134
e-value: 7.1E-18
score: 64.6
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 60..155
score: 21.933
NoneNo IPR availableGENE3D3.40.30.10coord: 48..154
e-value: 2.3E-34
score: 119.4
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 61..153
NoneNo IPR availablePANTHERPTHR45694:SF5GLUTAREDOXIN 2coord: 61..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 38..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.534
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 74..89
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 60..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig105contigE-siliculosus-1a_F_contig105:73845..78328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig105.360.1mRNA_E-siliculosus-1a_F_contig105.360.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig105 73767..78463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig105.360.1 ID=prot_E-siliculosus-1a_F_contig105.360.1|Name=mRNA_E-siliculosus-1a_F_contig105.360.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=156bp
MRPVLNLFFLFGSSVGFYANPMMRRVAVSSFAGSTIVRAASATALPSQRQ
AKFTTSMNSVDFVEKEIDGNNVVVFSKSYCPFCTRTKNLFAGLGVDATVY
ELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALK
TLLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR011767GLR_AS
IPR002109Glutaredoxin
IPR011899Glutaredoxin_euk/vir
IPR014025Glutaredoxin_subgr