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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10288.241.1 vs. uniprot
Match: A0A6H5KEK3_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK3_9PHAE) HSP 1 Score: 52.8 bits (125), Expect = 5.190e-6 Identity = 24/29 (82.76%), Postives = 27/29 (93.10%), Query Frame = 0 Query: 1 MEPNVPVKRAVFHDITQETLVKAFEVRRE 29
+EP VPVKRAVFH+ITQE LVKAFEVRR+
Sbjct: 218 LEPKVPVKRAVFHEITQEALVKAFEVRRQ 246
BLAST of mRNA_E-siliculosus-1a_F_contig10288.241.1 vs. uniprot
Match: D8LDU2_ECTSI (DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU2_ECTSI) HSP 1 Score: 52.8 bits (125), Expect = 7.340e-6 Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0 Query: 1 MEPNVPVKRAVFHDITQETLVKAFEVRREFF-NLGQAQEKRPAASLTAFIPGSSSLRGFAPDGCKVWRLR 69
+EP VPVKRAVFH+ITQE LVKAFE + NL QAQE R A + + F G R++
Sbjct: 212 LEPKVPVKRAVFHEITQEALVKAFEEPGQIDENLVQAQEARRILDRLAGFTLTPVIWNFVAPGLSAGRVQ 281
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10288.241.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match Name | E-value | Identity | Description | |
A0A6H5KEK3_9PHAE | 5.190e-6 | 82.76 | Toprim domain-containing protein n=1 Tax=Ectocarpu... | [more] |
D8LDU2_ECTSI | 7.340e-6 | 45.71 | DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus si... | [more] |
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig10288.241.1 ID=prot_E-siliculosus-1a_F_contig10288.241.1|Name=mRNA_E-siliculosus-1a_F_contig10288.241.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=96bp MEPNVPVKRAVFHDITQETLVKAFEVRREFFNLGQAQEKRPAASLTAFIP GSSSLRGFAPDGCKVWRLRRWSSATARTSSSSPRIAGTWSPTLPPR back to top
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