prot_E-siliculosus-1a_F_contig1005.94.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1005.94.1
Unique Nameprot_E-siliculosus-1a_F_contig1005.94.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length269
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A6H5L4N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N7_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 8.310e-154
Identity = 240/262 (91.60%), Postives = 243/262 (92.75%), Query Frame = 0
Query:    1 LGVGEGLLCLATPTVAFAFLSAPPATAVRRTNTASSTALTGIMSMSSPAGARGQSRDLRLVADTSATRRRWEGRQGRSLLQQLRSEAAAAGSEESPKPSESSTTVGAAVDDSKGEGGPIKRGFRRVARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            LG   GLLCLA PTVAFAF SAPPATAVRRTNTASSTALTGIM MSS   ARGQS DLR VADT AT RRWEGRQGR+LLQQLRSE AAAGSEESPKPSESSTT GAAVDD KGEGGPIKRGFRRVARFFGAGKKMPN+KELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAP FDRFIEFLMKK+GRGKGVATGLCV LVNILGTF LLSTGILLASIFSG
Sbjct:    5 LGALTGLLCLAMPTVAFAFQSAPPATAVRRTNTASSTALTGIMCMSSTR-ARGQSSDLRRVADTGATPRRWEGRQGRALLQQLRSEVAAAGSEESPKPSESSTTGGAAVDDGKGEGGPIKRGFRRVARFFGAGKKMPNVKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKSGRGKGVATGLCVVLVNILGTFVLLSTGILLASIFSG 265          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: D7FRK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK2_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 4.240e-121
Identity = 196/227 (86.34%), Postives = 200/227 (88.11%), Query Frame = 0
Query:   37 TALTGIMSMSSPAGARGQSR-DLRLVADTSATRRRWEGRQGRSLLQQLRSEAAAAGSEESPKPSESSTTVGAAVDDSKGEGGPIKRGFRRVARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            TALTGIMSMSSP GA GQS  DLRLVADT ATRRRWEGRQGR+LLQQLRSEAA                   AVDDS+GEGGPIKRG RRVARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPL+PGQWQVFLVSYATLWAINNVLRVPRFALSVSLAP FDRFIEFLMKKTGRGKGVATGLCVFLVN LGTFALLSTGILLAS+FSG
Sbjct:    9 TALTGIMSMSSP-GAPGQSSSDLRLVADTGATRRRWEGRQGRALLQQLRSEAAXXXXXXXXXXXXXXXXXXXAVDDSEGEGGPIKRGLRRVARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLSPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKTGRGKGVATGLCVFLVNFLGTFALLSTGILLASMFSG 234          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A835YJB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.030e-50
Identity = 89/152 (58.55%), Postives = 113/152 (74.34%), Query Frame = 0
Query:  118 PIKRG-FRRVARFF-GAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSGAYHFI 267
            P KRG   +V  FF G GK    + ++GLYA+LSYGFVSNASYAIC+ ++W+ +SK++GLSPLAPGQWQ FL  Y  L+  NN++R  R ALS++LAP FDR I F+M KT R + VAT +CVF VN+LGT AL+S GILLAS+FSG   F+
Sbjct:  105 PAKRGPVGKVKLFFSGDGKNRQKLAKMGLYAVLSYGFVSNASYAICLSVSWYLASKRSGLSPLAPGQWQFFLSVYGGLFVFNNIIRPARLALSLALAPAFDRLIAFIMAKTKRSRAVATAICVFFVNVLGTTALMSGGILLASLFSGVPVFV 256          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A6V1QBW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QBW0_HETAK)

HSP 1 Score: 142 bits (357), Expect = 1.850e-37
Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = 0
Query:  139 IKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            ++ LG  ALLSYG+VSN SY IC+ LAW+  ++++GLSPLAPGQW  FL  Y   + + NV+R  RFA SV + PVFDR + F+MK+TG  K  A G+ VFLVNI GTF LL TG+ LAS+ +G
Sbjct:  120 LRSLGAAALLSYGWVSNTSYMICLSLAWYVHARRSGLSPLAPGQWPQFLAVYGGFFVVQNVIRPLRFAFSVFMTPVFDRMVAFIMKRTGLSKPKAFGVTVFLVNICGTFTLLFTGVTLASLAAG 243          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A7S0YP80_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YP80_9CRYP)

HSP 1 Score: 138 bits (347), Expect = 1.070e-35
Identity = 76/156 (48.72%), Postives = 96/156 (61.54%), Query Frame = 0
Query:  114 GEGGPIKRGFRRVARFFGAGK-KMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGR------GKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            GE GPI +    +  FFG  K +   +  LG  ALLSYGFVSN SY  CV  AW    K+TGLSPLA GQW  FL  Y   WA+ N++R  RFALSV++APVF+RF+ F+ K+          K VA G+ VFLVN+LGT + L  G+ LA+  +G
Sbjct:  123 GERGPIAKAVGAIKSFFGKAKMEKAQLAALGTSALLSYGFVSNVSYVSCVICAWVVFGKQTGLSPLAAGQWPKFLAVYGGFWAVLNIIRPARFALSVAIAPVFERFVTFVQKRASAVTKKEVPKPVAFGIVVFLVNLLGTLSYLFLGLTLATSIAG 278          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A1E7FWD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWD1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.590e-33
Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 0
Query:  139 IKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLS 251
            + ++GL ALLSYGFVSN SY + VGLAWF  SKKTGLSPLAPGQW  FL  YA  +  NN++R  R A+S+ + P FD+ +  + +KTG  K ++ G+ VFL NI GT +L++
Sbjct:    4 LAKMGLSALLSYGFVSNMSYCVSVGLAWFGFSKKTGLSPLAPGQWPKFLAVYAGFYVFNNIVRPIRLAISIGVTPYFDKAVATIQRKTGFNKTLSIGIVVFLANICGTTSLMA 116          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A448YVF5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVF5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.530e-33
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 0
Query:  139 IKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            + ++GL ALLSYGFVSN SY   V LAWF  SKKTGLSPLAPGQW+ FL  YA  +  NN +R  R A+S+ + P FD+ +  + +KT   K V+ G+ VFL N+ GT +L+S GI +AS+ +G
Sbjct:  134 LAKMGLSALLSYGFVSNISYCFTVSLAWFGFSKKTGLSPLAPGQWKGFLAVYAGFYVFNNFIRPMRLAVSIGVTPYFDKAVAAIQRKTKFSKSVSIGIVVFLANVCGTTSLMSLGIYIASLAAG 257          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A7S1Y247_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y247_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.640e-31
Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 0
Query:  141 ELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            ++G+  LLSYG+VSN SYAIC G+AWF  S++TGLSPLAPGQW+ FL  YA     NNV+R  RF LSV+ +  FD  +  + K+    K  A GL VFL N +GT A +  GI LAS  SG
Sbjct:   62 KMGMSCLLSYGWVSNMSYAICTGIAWFIFSRQTGLSPLAPGQWKKFLAVYAGFALFNNVIRPVRFGLSVAASRYFDGAVNSIQKRLNIRKAYAIGLMVFLANFVGTIAAMCLGICLASAASG 183          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: K0S7R0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7R0_THAOC)

HSP 1 Score: 125 bits (314), Expect = 4.780e-31
Identity = 60/124 (48.39%), Postives = 85/124 (68.55%), Query Frame = 0
Query:  139 IKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            + +LGL ALLSYGFVSN SYA+ + L+WF  SK+TGLSPLA GQW+ FL  Y   +  NN++R  RF  SV +A  F++F++F+ +K+   +  A G+ VFL N+ GTFA +  G+ +AS  +G
Sbjct:  134 LSKLGLSALLSYGFVSNMSYAVTLSLSWFIHSKRTGLSPLAEGQWKPFLAVYGGFYVFNNIIRPLRFGASVLVAKYFEQFVKFIQRKSHLSRKWAIGVVVFLANVCGTFAAMGLGVFIASTAAG 257          
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Match: A0A6U6GPR6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GPR6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.410e-31
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0
Query:  139 IKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALLSTGILLASIFSG 262
            + ++G+ ALLSYGFVSN SY++ V LAW+  SKKTGLSPLAPGQW+ FL  YA  +  NN +R  R AL+  +   FD  + F+ +KT   +  + G  VFL N  GT A +S GI+LASI +G
Sbjct:  125 LAKMGMSALLSYGFVSNMSYSVSVSLAWYGFSKKTGLSPLAPGQWKPFLAVYAGFYVFNNFVRPIRVALAAGVTKYFDATVNFIQRKTKFSRSASVGTVVFLANFCGTLAAMSFGIMLASIAAG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1005.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N7_9PHAE8.310e-15491.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRK2_ECTSI4.240e-12186.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJB4_9STRA5.030e-5058.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QBW0_HETAK1.850e-3755.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0YP80_9CRYP1.070e-3548.72Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A1E7FWD1_9STRA1.590e-3353.10Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A448YVF5_9STRA5.530e-3351.61Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1Y247_9STRA3.640e-3152.46Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
K0S7R0_THAOC4.780e-3148.39Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6U6GPR6_9STRA5.410e-3150.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34370FAMILY NOT NAMEDcoord: 61..258
NoneNo IPR availablePANTHERPTHR34370:SF1coord: 61..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..180
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.502
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 181..200
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1005contigE-siliculosus-1a_F_contig1005:3570..7369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1005.94.1mRNA_E-siliculosus-1a_F_contig1005.94.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1005 3570..7369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1005.94.1 ID=prot_E-siliculosus-1a_F_contig1005.94.1|Name=mRNA_E-siliculosus-1a_F_contig1005.94.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=269bp
LGVGEGLLCLATPTVAFAFLSAPPATAVRRTNTASSTALTGIMSMSSPAG
ARGQSRDLRLVADTSATRRRWEGRQGRSLLQQLRSEAAAAGSEESPKPSE
SSTTVGAAVDDSKGEGGPIKRGFRRVARFFGAGKKMPNIKELGLYALLSY
GFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVL
RVPRFALSVSLAPVFDRFIEFLMKKTGRGKGVATGLCVFLVNILGTFALL
STGILLASIFSGAYHFIV*
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