prot_E-siliculosus-1a_F_contig1004.92.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1004.92.1
Unique Nameprot_E-siliculosus-1a_F_contig1004.92.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length442
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1004.92.1 vs. uniprot
Match: D7FKN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN6_ECTSI)

HSP 1 Score: 740 bits (1911), Expect = 3.570e-263
Identity = 396/441 (89.80%), Postives = 404/441 (91.61%), Query Frame = 0
Query:    6 ALPAACAV----DDNTANTSTASFLSTGQASDGGGVGGDPGYDERKGSAGSRKNLGNATSTTEASAEKVDSNSTSAVKPLDLGGPEPGSTAGDGHGSSLAVPAPSSMAKLPPCLPSNTRLEEQAEG-----QSRDRAMSSAASARKSPPGPQMKVPTTDLVFVLSVAVQDSPECQRLVLKAGGVAAMSTTLQHLVSRVKQEAASRWDGSAEDCSDRYARLAETCLRVMECLGRVERGRRRLVRGGSVEIAISTVRCFRCHSGVLTAATGLLLLLSVSPEGRGWILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQIGNLAYYHFFRVVSEAGLLPHPHEDVHDWRQRLRRQD 437
            A+ AACA      DNTAN STASFLSTGQASDGGGVG DPGYD RKGSAG RK LGNATSTTEASAEKVDSN TSA+KPLDLGGPE GSTAGDGHGSSLAVPAP SMA L PCL SNTRLEE+ E      +SRDRAMSSAASARKSPPG  M VPTTDLVFVLSVAVQDSP CQRLVLKAGGVAAMS TLQHLVSRVKQEA SRWDG AEDCSDRYARLAETCLRVME LG VERGRRRLVRGGSVEIAIST+RCFRCHSGVLTAATGLLLLLSVSPEGRG ILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPG+KHIPGWTVSEEERL TEKALETAEVAASNWTPYNLATFMGTMRSQHQLQIGNLAYYHFFRVVSEAGLLPHP+EDVHDWRQRLRR +
Sbjct:  249 AVAAACAARMTPSDNTANASTASFLSTGQASDGGGVGDDPGYDGRKGSAGGRKTLGNATSTTEASAEKVDSNGTSAMKPLDLGGPETGSTAGDGHGSSLAVPAPPSMANLLPCLSSNTRLEEREEDASPERKSRDRAMSSAASARKSPPGSHMNVPTTDLVFVLSVAVQDSPVCQRLVLKAGGVAAMSATLQHLVSRVKQEAGSRWDGGAEDCSDRYARLAETCLRVMEYLGCVERGRRRLVRGGSVEIAISTIRCFRCHSGVLTAATGLLLLLSVSPEGRGRILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGKKHIPGWTVSEEERLNTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQIGNLAYYHFFRVVSEAGLLPHPNEDVHDWRQRLRRYE 689          
BLAST of mRNA_E-siliculosus-1a_F_contig1004.92.1 vs. uniprot
Match: A0A6H5JF41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF41_9PHAE)

HSP 1 Score: 592 bits (1526), Expect = 1.700e-204
Identity = 340/449 (75.72%), Postives = 353/449 (78.62%), Query Frame = 0
Query:    1 MTPSTALPAACAVDDN--TANTSTASFLSTGQASDGGGVGGDPGYDERKGSAGSRKNLGNATSTTEASAEKVDSNSTSAVKPLDLGGPEPGSTAGDGHGSSLAVPAPSSMAKLPPCLPSNTRL----EEQA--EGQSRDRAMSSAASARKSPPGPQMKVPTTDLVFVLSVAVQDSPECQRLVLKAGGVAAMSTTLQHLVSRVKQEAASRWDGSAEDCSDRYARLAETCLRVMECLGRVERGRRRLVRGGSVEIAISTVRCFR-CHSG------------------------------------VLTAATGLLLLLSVSPEGRGWILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQIGNL 404
            MTPS ALPA CA+DDN  TANTSTASFLSTGQAS G  VG DPGYD RKGSAG RK LGNATST EASAEK DSN TSAVKP  LGGPE GSTAGDGHGSSLAVPAPS+MAKL PCL SNTRL    EE A  E Q RDR MSSAAS RKSP G  +K+PTTDLVFVLSVA+QD+PECQRLVLKAGGVAAMSTTLQHL+SRVKQ A SRWD S EDCSD YARLAE CLRVME LGRVERGRRRL RGG VEIAIST+RCFR CH G                                    +L+    LL L    P       +ARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQ+GN+
Sbjct:  258 MTPSAALPATCAIDDNGGTANTSTASFLSTGQASHGREVGDDPGYDRRKGSAGRRKTLGNATSTMEASAEKFDSNGTSAVKPPGLGGPETGSTAGDGHGSSLAVPAPSTMAKLLPCLSSNTRLDGEEEEDASPERQRRDRVMSSAASTRKSPSGSPLKLPTTDLVFVLSVAMQDTPECQRLVLKAGGVAAMSTTLQHLISRVKQGAGSRWDRSEEDCSDSYARLAEMCLRVMEHLGRVERGRRRLERGGYVEIAISTIRCFRGCHRGRDRFRIVGKLWPCAEHTRQPRARSSGGGSIFFCTCDILSTRRRLLYLHRCCPS------QARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQVGNM 700          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1004.92.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKN6_ECTSI3.570e-26389.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF41_9PHAE1.700e-20475.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 154..349
e-value: 2.5E-8
score: 35.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 158..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1004contigE-siliculosus-1a_F_contig1004:30981..34011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1004.92.1mRNA_E-siliculosus-1a_F_contig1004.92.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1004 30213..34549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1004.92.1 ID=prot_E-siliculosus-1a_F_contig1004.92.1|Name=mRNA_E-siliculosus-1a_F_contig1004.92.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=442bp
MTPSTALPAACAVDDNTANTSTASFLSTGQASDGGGVGGDPGYDERKGSA
GSRKNLGNATSTTEASAEKVDSNSTSAVKPLDLGGPEPGSTAGDGHGSSL
AVPAPSSMAKLPPCLPSNTRLEEQAEGQSRDRAMSSAASARKSPPGPQMK
VPTTDLVFVLSVAVQDSPECQRLVLKAGGVAAMSTTLQHLVSRVKQEAAS
RWDGSAEDCSDRYARLAETCLRVMECLGRVERGRRRLVRGGSVEIAISTV
RCFRCHSGVLTAATGLLLLLSVSPEGRGWILKARGFRVVFEAMQRLVGND
LVQVKGAEMLQTLINEEPQARREMDSIKGGWQWLCQGTSGGDALIRYAPG
EKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQ
IGNLAYYHFFRVVSEAGLLPHPHEDVHDWRQRLRRQDAILP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like