prot_E-siliculosus-1a_F_contig100.58.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig100.58.1
Unique Nameprot_E-siliculosus-1a_F_contig100.58.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length166
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.400e-115
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 165
            MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG
Sbjct:    9 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A7S2V4A8_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A8_9STRA)

HSP 1 Score: 276 bits (705), Expect = 7.500e-93
Identity = 134/163 (82.21%), Postives = 149/163 (91.41%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR ++VDKLVLNCSVGESGDRLTRA KVLEQLTGQ+P  SKARYTVRSFGIRRNEKIACHVTVRG+KALEILERGLKVKEYEL+R+NFS TG+FGFGIQEHIDLG+KYDPSTGIYGMDFFVVL RPG RV KRKA+ +++G  H++ K DA+KWFQ KFEGIV
Sbjct:   10 MRAVQVDKLVLNCSVGESGDRLTRAIKVLEQLTGQTPCVSKARYTVRSFGIRRNEKIACHVTVRGEKALEILERGLKVKEYELRRRNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLRRPGNRVGKRKARQSRMGAPHRLAKDDAIKWFQQKFEGIV 172
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A0K9Q188_ZOSMR (60S ribosomal protein L11-1 n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K9Q188_ZOSMR)

HSP 1 Score: 274 bits (700), Expect = 5.320e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRA+KVLEQL+GQSPV+SKAR+TVRSFGIRRNEKIACHVTVRG+KA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFFVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARFTVRSFGIRRNEKIACHVTVRGEKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A0D3AUD9_BRAOL (Uncharacterized protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AUD9_BRAOL)

HSP 1 Score: 274 bits (700), Expect = 5.690e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A7J6V5X0_THATH (60S ribosomal protein L11 n=3 Tax=Spermatophyta TaxID=58024 RepID=A0A7J6V5X0_THATH)

HSP 1 Score: 274 bits (700), Expect = 5.690e-92
Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFFVVL RPGYRV +R+   ++IG QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRIGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A0J8BKL6_BETVV (Uncharacterized protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0J8BKL6_BETVV)

HSP 1 Score: 274 bits (700), Expect = 5.690e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PVYSKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: B7FN35_MEDTR (50S ribosomal protein L5P n=2 Tax=Pentapetalae TaxID=1437201 RepID=B7FN35_MEDTR)

HSP 1 Score: 273 bits (699), Expect = 7.820e-92
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFFVVL RPGYRV +R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDMKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A1S4CT55_TOBAC (60S ribosomal protein L11-1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CT55_TOBAC)

HSP 1 Score: 273 bits (698), Expect = 1.110e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A251UZR4_HELAN (Putative 60S ribosomal protein L11 n=11 Tax=Pentapetalae TaxID=1437201 RepID=A0A251UZR4_HELAN)

HSP 1 Score: 273 bits (698), Expect = 1.150e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFFVVL RPGYRV +R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Match: A0A3P6F0I7_BRAOL (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6F0I7_BRAOL)

HSP 1 Score: 273 bits (697), Expect = 1.160e-91
Identity = 129/163 (79.14%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    1 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 163
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig100.58.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI1.400e-115100.0050S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
A0A7S2V4A8_9STRA7.500e-9382.2150S ribosomal protein L5, chloroplastic n=1 Tax=Fi... [more]
A0A0K9Q188_ZOSMR5.320e-9279.7560S ribosomal protein L11-1 n=6 Tax=Mesangiosperma... [more]
A0A0D3AUD9_BRAOL5.690e-9279.75Uncharacterized protein n=10 Tax=Brassicaceae TaxI... [more]
A0A7J6V5X0_THATH5.690e-9280.3760S ribosomal protein L11 n=3 Tax=Spermatophyta Ta... [more]
A0A0J8BKL6_BETVV5.690e-9279.75Uncharacterized protein n=6 Tax=Chenopodiaceae Tax... [more]
B7FN35_MEDTR7.820e-9279.7550S ribosomal protein L5P n=2 Tax=Pentapetalae Tax... [more]
A0A1S4CT55_TOBAC1.110e-9179.7560S ribosomal protein L11-1-like n=4 Tax=Nicotiana... [more]
A0A251UZR4_HELAN1.150e-9179.75Putative 60S ribosomal protein L11 n=11 Tax=Pentap... [more]
A0A3P6F0I7_BRAOL1.160e-9179.14Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..165
e-value: 4.0E-80
score: 269.7
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..163
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 1..52
e-value: 2.9E-18
score: 65.9
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..162
e-value: 2.4E-41
score: 138.2
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..163
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 56..152
e-value: 9.9E-22
score: 76.9
NoneNo IPR availablePANTHERPTHR11994:SF1960S RIBOSOMAL PROTEIN L11-2coord: 1..163
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 29..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig100contigE-siliculosus-1a_F_contig100:53169..57044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig100.58.1mRNA_E-siliculosus-1a_F_contig100.58.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig100 53169..57068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig100.58.1 ID=prot_E-siliculosus-1a_F_contig100.58.1|Name=mRNA_E-siliculosus-1a_F_contig100.58.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=166bp
MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFG
IRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQE
HIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTD
AVKWFQAKFEGIVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020929Ribosomal_L5_CS
IPR031309Ribosomal_L5_C
IPR002132Ribosomal_L5
IPR031310Ribosomal_L5_N
IPR022803Ribosomal_L5_dom_sf