prot_E-siliculosus-1a_F_contig100.55.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig100.55.1
Unique Nameprot_E-siliculosus-1a_F_contig100.55.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length204
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 1.080e-104
Identity = 153/156 (98.08%), Postives = 154/156 (98.72%), Query Frame = 0
Query:   48 LSPLEFSRRTCAELGIGLSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQVSRFRMAAPSSTTNKEDAQFKDVEGPCVSSALNSSSLYEVKAPP 203
            LSPLEFSRRTCAELGIG+SFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALT HQQVSRFRMAAPSSTTN EDAQFKDVEGPCVSSALNSSSLYEVKAPP
Sbjct:   39 LSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVSSALNSSSLYEVKAPP 194          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A0A835YTF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.930e-19
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   48 LSPLEFSRRTCAELGIGLSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIA---PAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQVSRFRMAAPSS 170
            LSP  F+  T A+L +      P+A++I  Q++      P+W+     A   PAGE +  + +++R  +V++RD+ +WD+N P NSPE FA  TVADL LPQ MEP IAL + +Q++ +R    S+
Sbjct:  530 LSPEAFAAATAADLALPRKLEAPLARAIRAQVVTAQATLPVWSGSSGAAAMYPAGEALVPIELELRLGAVLYRDKFEWDMNEPLNSPEAFAARTVADLALPQPMEPAIALALREQLANYRQLTRSA 655          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A3LPL9_PICST (Chromatin structure remodeling complex protein SFH1 (SNF5 homolog 1) n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3LPL9_PICST)

HSP 1 Score: 64.7 bits (156), Expect = 8.360e-9
Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 0
Query:   48 LSPLEFSRRTCAELGIGLSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVII---DVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQVSRFRMAAPSSTTNKEDAQFKDVEG 184
            ++P +F+   C +L +  S    IA+SI QQ+ +Y   + +            N+  V+I    V     +F+D+ +WD+N    +PE FARI VAD+    E  P I+  +H+ + R +      T N E   F  V G
Sbjct:  144 ITPYQFADILCNDLELPNSMNSQIAESIVQQIDDYNYASNL--------QLPSNVPCVVIIDLSVSLNKHLFQDKFEWDLNGNGVTPEDFARIVVADMGFSLEFYPAISHALHEIIIRVKKEIVDGTYNNEIHNFHQVRG 275          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A0A2G4T9N8_RHIZD (SNF5-domain-containing protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4T9N8_RHIZD)

HSP 1 Score: 63.9 bits (154), Expect = 1.840e-8
Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 0
Query:   48 LSPLEFSRRTCAELGIGLSFVQPIAQSIGQQLIEYGR--------------------------KNPMWAVEGTIAPAGENIQTVI-IDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQVSRF 163
            +SP++F+R TC +LG+ L FV+ IA SI  Q+ +Y                            K+ M  ++  +      ++  I +D+   ++   DR +WD+ C  NSPE FA++ V++L L  E +  IA +I +Q+  +
Sbjct:  197 VSPIQFARITCDDLGLPLYFVRLIAASIVDQIEDYYSSIYGADEENVESTSLHHPLAIRNTKLKDGMLDLKTDLFTGKTELRIFIKLDITIGNMELNDRFEWDITCKENSPEAFAKVLVSELGLSGEFKSAIAHSIREQIYTY 339          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A0A7S3CK57_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CK57_9SPIT)

HSP 1 Score: 53.9 bits (128), Expect = 6.400e-6
Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 0
Query:   99 GENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQVSRFRMAA 167
            GE ++ + + +R  +++ RD+ +WD+N P NSPE FA     DL L  +    IA +I +Q++  +  A
Sbjct:    3 GELLRVIQLKIRIGNIVLRDKFEWDINNPQNSPEDFAESLCTDLGLGSDFMLPIAHSIREQINEHQRTA 71          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A0A7S3IQF1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IQF1_9SPIT)

HSP 1 Score: 51.6 bits (122), Expect = 3.790e-5
Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0
Query:   99 GENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQ 159
            GE ++ + ++VR  ++I RD+ +WD+N P NSPE FA    ADL L  +     A  I +Q
Sbjct:   63 GELVRVISLNVRIGNIILRDKFEWDINNPSNSPEDFAESLCADLGLSPDFMLPAAHQIREQ 123          
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Match: A0A642URV3_9ASCO (Uncharacterized protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642URV3_9ASCO)

HSP 1 Score: 53.1 bits (126), Expect = 9.690e-5
Identity = 35/112 (31.25%), Postives = 57/112 (50.89%), Query Frame = 0
Query:   53 FSRRTCAELGIGLSFVQPIAQSIGQQLIEYGR----KNPMWAVEGTIAPAGENIQTVI-IDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTIHQQ 159
            F+     +  + LS+ Q +A SI +Q+ ++         M A E   A    +++ VI +D+        D+ +WD+NCP NSPE+FA +   DL+L  E +  IA  I +Q
Sbjct:  380 FAENLLDDFSVPLSYTQLLANSISEQISDFCPHAYCNETMKATETKDA----DMRIVIKLDITIGQHNLVDQFEWDMNCPENSPEEFAELMCNDLSLSGEFKTAIAHAIREQ 487          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig100.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FN49_ECTSI1.080e-10498.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTF3_9STRA2.930e-1938.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A3LPL9_PICST8.360e-929.29Chromatin structure remodeling complex protein SFH... [more]
A0A2G4T9N8_RHIZD1.840e-827.97SNF5-domain-containing protein n=1 Tax=Rhizopus mi... [more]
A0A7S3CK57_9SPIT6.400e-633.33Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A7S3IQF1_9SPIT3.790e-539.34Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A642URV3_9ASCO9.690e-531.25Uncharacterized protein n=1 Tax=Trichomonascus cif... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 105..167
e-value: 8.3E-14
score: 52.0
IPR006939SNF5/SMARCB1/INI1PANTHERPTHR10019SNF5coord: 48..169
NoneNo IPR availablePANTHERPTHR10019:SF5SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1coord: 48..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig100contigE-siliculosus-1a_F_contig100:32754..33658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig100.55.1mRNA_E-siliculosus-1a_F_contig100.55.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig100 31769..34443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig100.55.1 ID=prot_E-siliculosus-1a_F_contig100.55.1|Name=mRNA_E-siliculosus-1a_F_contig100.55.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=204bp
MAFPPVSGGLDTNSTLLLFIDSTCLHRNCRFSNDLPSLCFVERRAMQLSP
LEFSRRTCAELGIGLSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGE
NIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEP
IIALTIHQQVSRFRMAAPSSTTNKEDAQFKDVEGPCVSSALNSSSLYEVK
APP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5