prot_E-siliculosus-1a_F_contig1.26.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A0A6H5KKW4_9PHAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW4_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 8.780e-177 Identity = 271/284 (95.42%), Postives = 274/284 (96.48%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKKPAARGAKRKADGEAATSASLDAXXXXXXXXXXXXXXXX-----TTGGMTKTLGATKPTR 279
M+FPGAAEDPEQRSFIDPVWLQQWGLGP+NALDYFALSPFYDKACNNEQCRMQ VDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEV AIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGK+PAARGAKRKADGEA TSASLDA XXXXXXXXXXXXXXX TTGGMTKTL ATKPTR
Sbjct: 1 MEFPGAAEDPEQRSFIDPVWLQQWGLGPQNALDYFALSPFYDKACNNEQCRMQSVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKADGEAVTSASLDAAXXXXXXXXXXXXXXXXXXTPTTGGMTKTLAATKPTR 284
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: D7G6X0_ECTSI (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X0_ECTSI) HSP 1 Score: 303 bits (777), Expect = 4.280e-102 Identity = 146/150 (97.33%), Postives = 147/150 (98.00%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVE 150
MDFPGAAEDPEQRSFIDPVWLQQWGLGP+NALDYFALSPFYDKACNNEQCRMQ VDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEV AIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAF E
Sbjct: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFGE 150
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A0A835YVL9_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL9_9STRA) HSP 1 Score: 164 bits (414), Expect = 8.280e-46 Identity = 96/216 (44.44%), Postives = 125/216 (57.87%), Query Frame = 0
Query: 8 EDPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDV-DPREGLLNLTGLEFMLVELPPEMSFLP-PGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAE-EDRDAKAALKLSMDNILMGLVEKYIDGDGEG 220
ED Q SF D +WL+ + LGP+ A+DYFALSPFYD+ NNE CRMQ + D + +TG+E+++ ELPPE LP PG P PQPR L VIKKQ RKS + EV +YYIM+G IYQAP+ LI SRL K L+ +F L L ++ G YDW W EA + + A +A++ D IL+ LV +Y +GEG
Sbjct: 16 EDQTQLSFQDTMWLRSFYLGPETAIDYFALSPFYDRTSNNELCRMQGLTDHVAAMQTMTGIEYVVEELPPETDELPEPGAP----PQPRHLMVIKKQYRKSKTQAEVRGVYYIMDGTIYQAPSALALITSRLQKAAFMLSESFAALRALPA-HNARGAYDWPWNAEAXXXXXXXXXXXXXXXXXXQSQAALSAVRAGADAILLQLVSRYARSEGEG 226
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: M4C4K5_HYAAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K5_HYAAE) HSP 1 Score: 120 bits (302), Expect = 2.990e-29 Identity = 75/217 (34.56%), Postives = 122/217 (56.22%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLS----MDNILMGLVEKY 213
M+ A+D SF D VWLQ + L P+ L YFALSPFYD++CNNE+ +MQ + + L NL G+E+ L+ P A P++L+VI+KQ R S + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +KD +E +E + + + + K + +D+IL+ L++K+
Sbjct: 1 MEVAAHADD-YNASFRDTVWLQSFPLNPQTVLHYFALSPFYDRSCNNERLKMQRLG-LDQLKNLRGIEYELL-------------PNAAKQLPQQLYVIRKQRRSSRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSARVDSILIQLMKKH 199
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A0A2R5GW25_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW25_9STRA) HSP 1 Score: 120 bits (300), Expect = 9.270e-29 Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEA 172
SF+D W++ +GL N LDYFA SPFYD +CNNE RMQ++ GLE ML ++PP + + + P+G +P LF++ KQ R S + V A+YYI++ VIYQAP++Q+LI +RL+K T+HL NAF ++ K A+ S G + W + +A
Sbjct: 65 SFLDDNWIRAFGLSAHNVLDYFACSPFYDTSCNNEILRMQNL----------GLE-MLADMPPGIEY----RLLPSGHEPV-LFIVVKQERASKTVVRRQALYYILDKVIYQAPSLQRLIATRLSKSTNHLQNAFDQMVKAARYAPSQG-FTWHFDGDA 206
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: D0NQQ4_PHYIT (Mediator of RNA polymerase II transcription subunit 6 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQQ4_PHYIT) HSP 1 Score: 117 bits (292), Expect = 6.290e-28 Identity = 72/209 (34.45%), Postives = 116/209 (55.50%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLS----MDNILMGLVEKY 213
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ + + L NL G+E+ L+ P A P++LF+I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +KD +E +E + + + + K + +D+IL+ L++K+
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LDQLKNLRGVEYELL-------------PNTAKQMPQQLFIIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSARVDSILIQLMKKH 199
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A0A484EGT8_BRELC (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT8_BRELC) HSP 1 Score: 111 bits (277), Expect = 2.000e-26 Identity = 61/158 (38.61%), Postives = 91/158 (57.59%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDW 166
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ + E L NL G+E+ L+ P A P++L++I+KQ R + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G Y W
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LEQLKNLRGVEYELL-------------PNAAKQLPQQLYIIRKQRRNGRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG-YAW 150
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A9RVG1_PHYPA (Mediator of RNA polymerase II transcription subunit 6 (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVG1_PHYPA) HSP 1 Score: 111 bits (277), Expect = 2.340e-26 Identity = 73/201 (36.32%), Postives = 103/201 (51.24%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPRE--GLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEK 212
SF D +WL + L DYFALSPFYD+ CNNEQ RM+ + P + L TG+E++L E Q LFVI+KQ R P V A YY+++G IYQAP + +I SR+ + +H+ NAF + S AKL G G + + D+Q K + V D K +++ D+IL G++ K
Sbjct: 9 SFRDQLWLSAYPLDRNLVFDYFALSPFYDRTCNNEQLRMEAIHPLDMTHLSKKTGMEYILHEA-----------------QEPHLFVIRKQKRDGPEKVSAQAAYYVLDGSIYQAPHLYNVIGSRVVRSLYHITNAFAQAS--AKLEKIGTG-----EADPADVQVKQSTTKFV-------DMKEVMRV--DSILAGIMRK 176
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: A0A0N7L744_PLAHL (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L744_PLAHL) HSP 1 Score: 110 bits (275), Expect = 2.420e-26 Identity = 60/152 (39.47%), Postives = 90/152 (59.21%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELS 152
M+ G +D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ + + L NL G+E+ L+ P A P++L++I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+
Sbjct: 1 MEVAGHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LDQLKNLRGVEYELL-------------PNAAKQLPQQLYIIRKQRRNGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLA 137
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Match: K3WSB9_GLOUD (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB9_GLOUD) HSP 1 Score: 112 bits (279), Expect = 7.850e-26 Identity = 68/209 (32.54%), Postives = 116/209 (55.50%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPKNALDYFALSPFYDKACNNEQCRMQDVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVHAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLS----MDNILMGLVEKY 213
D SF D +WLQ + L + + YFALSPFYD++CNNE+ +MQ + + L N+ G+E+ ++ P A P++LF+I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +KD +E +E + + + + K + +D+IL+ L++K+
Sbjct: 8 DDYNASFRDTMWLQSFPLNAQTVIHYFALSPFYDRSCNNERLKMQRLG-LDQLKNMRGIEYEVL-------------PNTAKQLPQQLFLIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHTLAAGVRFSPTEG---YAWDFSSKDKKEPIIPSEQLQLKLKQKYEKIEKQREHSARVDSILIQLMKKH 199 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1.26.1 ID=prot_E-siliculosus-1a_F_contig1.26.1|Name=mRNA_E-siliculosus-1a_F_contig1.26.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=280bpback to top |