mRNA_E-siliculosus-1a_F_contig143.2532.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig143.2532.1
Unique NamemRNA_E-siliculosus-1a_F_contig143.2532.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig143.2532.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)

HSP 1 Score: 1887 bits (4889), Expect = 0.000e+0
Identity = 1115/1331 (83.77%), Postives = 1126/1331 (84.60%), Query Frame = 3
Query:   66 MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSASEKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRPLPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGXXXXXXXXXXXXXLNGVATPGGGERTRATEQREEXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPANEVPVCFAATESPTERPPLTTPMRSPTSAFEAVADRAGAAAQQAASN----VVSVNAQADVHATPTANSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGKSRPGSVLPAPRKDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVLEGRRRDSGADSINGASGAXXXXXXXXDGADRGARGSESAGSDASVRRGXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRNRATSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGEAEKEAA-VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKTFDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGXXXXXXXXXXDNLPPTSPRFSTPSRQRQLRRAASTSWW 4043
            MR+VR DAQPA+S GLGGRGGDSSPESFP GHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVA SASEKVL AAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGV APP G+YYRLPWYRRPLPSNRRVGVAGGGEATHLKRA                                                                                                                                                VADRAGA AQQAAS     VVS NAQA+VHATPTANSMAADRDESTREEGG ADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSG SRPGSVLPAPRKDSSNGGERSRGSSED+GDEVGLLSPPVN  KIEGPSPASREKEKTA VLEGRRRDSGADSINGAS A     XXX       RG             XXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGE+VTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAV+SHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGF+LITFADCVLSEREDLKSRSSRNR TSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEG  AVETEG GG AEKEAA VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR+GMFESHGLPATVKAVRRYAEGCKTFD+LVRQAPVGLN+VVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRG          DNLPPTSPRFSTPSRQRQLRRAASTSWW
Sbjct:    1 MRNVRSDAQPANSTGLGGRGGDSSPESFPPGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVADSASEKVLAAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVVAPPPGDYYRLPWYRRPLPSNRRVGVAGGGEATHLKRA------------------------------------------------------------------------------------------------------------------------------------------------VADRAGAVAQQAASKATSPVVSGNAQAEVHATPTANSMAADRDESTREEGGFADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGTSRPGSVLPAPRKDSSNGGERSRGSSEDIGDEVGLLSPPVNSAKIEGPSPASREKEKTAVVLEGRRRDSGADSINGASVAGAGAGXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGESVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGSAAVETEGMGGGAEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNEVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGG------DNLPPTSPRFSTPSRQRQLRRAASTSWW 1181          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2532.1 vs. uniprot
Match: A4S0J9_OSTLU (Rab-GAP TBC domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0J9_OSTLU)

HSP 1 Score: 63.2 bits (152), Expect = 3.360e-6
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 3
Query: 2484 RVWRWVLAQ----RTEDQTVRQAVISHGLPRFGRRHIWAAW--------AAVATPETYKKPKQSSDPAKEGSIVNT-IAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILI 2843
            R WR  +A     R   + VR    ++G+ R  R  +W AW        A+  T E Y +  + SD A   +  +  I  D+ART   H  F   G  L  L+RVL   A   A   AGY+QGMNYL GF+L+
Sbjct:   41 RRWRAFVANGRDARARGELVRAFARANGVGREARPRLWFAWSGAEAAKRASDTTYEEYLRAAELSDDAAAATTRDAQIEMDLARTFPEHARFAETGDALPALRRVLRATATSAA---AGYVQGMNYLGGFLLL 170          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2532.1 vs. uniprot
Match: A0A7S0EL96_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EL96_9EUKA)

HSP 1 Score: 54.7 bits (130), Expect = 8.170e-5
Identity = 28/111 (25.23%), Postives = 58/111 (52.25%), Query Frame = 3
Query: 3168 RDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR-QGMFESHGLPATVKAVRRYAEGC 3497
            + + G   +++++E LL +Q P++  HLR ++L +  +T +WF+C++  ++ ++S   R+WDL        P  +  VA+A+      Q + E+  +   V  +R     C
Sbjct:   13 QSMLGHQVDSQVLEQLLEQQLPELSAHLRSLSLSVPFVTTQWFLCLFLNALPSESCF-RVWDLIFCLH---PCTIFQVAIALFGSMEEQSLLEATDIGPAVFVIRSATRSC 119          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig143.2532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ94_ECTSI0.000e+083.77Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A4S0J9_OSTLU3.360e-635.34Rab-GAP TBC domain-containing protein n=1 Tax=Ostr... [more]
A0A7S0EL96_9EUKA8.170e-525.23Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig143contigE-siliculosus-1a_F_contig143:45436..56301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size3981
Model size5695
Exons9
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelStreptophyta
COG Functional cat.U
EggNOG OGs37HWR@33090,3GEW1@35493,COG5210@1,KOG2058@2759
EggNOG free text desc.TBC1 domain family member
GOsGO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006810,GO:0006886,GO:0008047,GO:0008104,GO:0008150,GO:0012505,GO:0015031,GO:0015833,GO:0017016,GO:0017137,GO:0019899,GO:0030054,GO:0030234,GO:0030695,GO:0031267,GO:0031338,GO:0031410,GO:0031982,GO:0032879,GO:0033036,GO:0033043,GO:0034613,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0045296,GO:0046907,GO:0050789,GO:0050790,GO:0050794,GO:0050839,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0060589,GO:0060627,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0090630,GO:0097708,GO:0098772
KEGG koko:K20165
Seed eggNOG ortholog3218.PP1S154_20V6.1
Seed ortholog evalue3e-09
Seed ortholog score71.6
Taxonomic scopeViridiplantae
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927944.9616556-UTR-E-siliculosus-1a_F_contig143:45435..454971622927944.9616556-UTR-E-siliculosus-1a_F_contig143:45435..45497Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 45436..45497 +
1696318747.8328018-UTR-E-siliculosus-1a_F_contig143:45435..454971696318747.8328018-UTR-E-siliculosus-1a_F_contig143:45435..45497Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 45436..45497 +
1622927944.977615-UTR-E-siliculosus-1a_F_contig143:46772..467751622927944.977615-UTR-E-siliculosus-1a_F_contig143:46772..46775Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 46773..46775 +
1696318747.842201-UTR-E-siliculosus-1a_F_contig143:46772..467751696318747.842201-UTR-E-siliculosus-1a_F_contig143:46772..46775Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 46773..46775 +
1622927945.0958595-UTR-E-siliculosus-1a_F_contig143:54652..563011622927945.0958595-UTR-E-siliculosus-1a_F_contig143:54652..56301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 54653..56301 +
1696318747.909535-UTR-E-siliculosus-1a_F_contig143:54652..563011696318747.909535-UTR-E-siliculosus-1a_F_contig143:54652..56301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 54653..56301 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927944.9900157-CDS-E-siliculosus-1a_F_contig143:46775..471021622927944.9900157-CDS-E-siliculosus-1a_F_contig143:46775..47102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 46776..47102 +
1696318747.8499262-CDS-E-siliculosus-1a_F_contig143:46775..471021696318747.8499262-CDS-E-siliculosus-1a_F_contig143:46775..47102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 46776..47102 +
1622927945.0007875-CDS-E-siliculosus-1a_F_contig143:47528..497531622927945.0007875-CDS-E-siliculosus-1a_F_contig143:47528..49753Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 47529..49753 +
1696318747.8578386-CDS-E-siliculosus-1a_F_contig143:47528..497531696318747.8578386-CDS-E-siliculosus-1a_F_contig143:47528..49753Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 47529..49753 +
1622927945.010946-CDS-E-siliculosus-1a_F_contig143:50157..503501622927945.010946-CDS-E-siliculosus-1a_F_contig143:50157..50350Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 50158..50350 +
1696318747.8654897-CDS-E-siliculosus-1a_F_contig143:50157..503501696318747.8654897-CDS-E-siliculosus-1a_F_contig143:50157..50350Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 50158..50350 +
1622927945.024008-CDS-E-siliculosus-1a_F_contig143:50967..513481622927945.024008-CDS-E-siliculosus-1a_F_contig143:50967..51348Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 50968..51348 +
1696318747.8726976-CDS-E-siliculosus-1a_F_contig143:50967..513481696318747.8726976-CDS-E-siliculosus-1a_F_contig143:50967..51348Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 50968..51348 +
1622927945.041349-CDS-E-siliculosus-1a_F_contig143:51832..519301622927945.041349-CDS-E-siliculosus-1a_F_contig143:51832..51930Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 51833..51930 +
1696318747.8799338-CDS-E-siliculosus-1a_F_contig143:51832..519301696318747.8799338-CDS-E-siliculosus-1a_F_contig143:51832..51930Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 51833..51930 +
1622927945.0549016-CDS-E-siliculosus-1a_F_contig143:53131..533871622927945.0549016-CDS-E-siliculosus-1a_F_contig143:53131..53387Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 53132..53387 +
1696318747.8870974-CDS-E-siliculosus-1a_F_contig143:53131..533871696318747.8870974-CDS-E-siliculosus-1a_F_contig143:53131..53387Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 53132..53387 +
1622927945.0676665-CDS-E-siliculosus-1a_F_contig143:53861..539971622927945.0676665-CDS-E-siliculosus-1a_F_contig143:53861..53997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 53862..53997 +
1696318747.8941276-CDS-E-siliculosus-1a_F_contig143:53861..539971696318747.8941276-CDS-E-siliculosus-1a_F_contig143:53861..53997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 53862..53997 +
1622927945.0818846-CDS-E-siliculosus-1a_F_contig143:54287..546521622927945.0818846-CDS-E-siliculosus-1a_F_contig143:54287..54652Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 54288..54652 +
1696318747.901651-CDS-E-siliculosus-1a_F_contig143:54287..546521696318747.901651-CDS-E-siliculosus-1a_F_contig143:54287..54652Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 54288..54652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig143.2532.1prot_E-siliculosus-1a_F_contig143.2532.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig143 46776..54652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig143.2532.1

>prot_E-siliculosus-1a_F_contig143.2532.1 ID=prot_E-siliculosus-1a_F_contig143.2532.1|Name=mRNA_E-siliculosus-1a_F_contig143.2532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1327bp
MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRR
SEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSAS
EKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQ
SRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRP
LPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGAAAAGAA
AAAGAALNGVATPGGGERTRATEQREENQQQGKQQQRQQPDKQQQQQDKQ
QDEQQQQQQQQQQQQQQQQQQQDKQQDKQQSPANEVPVCFAATESPTERP
PLTTPMRSPTSAFEAVADRAGAAAQQAASNVVSVNAQADVHATPTANSMA
ADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKL
RAEVARLKREMASMAAAAATTGITTPKQQKSGGSRRRPSQRIETSSPVAS
FSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQQRR
RSSSSSSGTMERRSSGGRTERRYHRDSIGVGFSGKSRPGSVLPAPRKDSS
NGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVLEGRR
RDSGADSINGASGAGAGAGAGGDGADRGARGSESAGSDASVRRGGARGNE
SAGSDASMRQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGET
VTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRG
GVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAVATPE
TYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLV
RCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRNRATS
GGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGEAEKE
AAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDL
LSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMW
YGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKTFDDL
VRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPV
YLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRS
PFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGGGGGGGGDN
LPPTSPRFSTPSRQRQLRRAASTSWW*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig143:45436..56301+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig143.2532.1 ID=mRNA_E-siliculosus-1a_F_contig143.2532.1|Name=mRNA_E-siliculosus-1a_F_contig143.2532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10866bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:45436..56301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGAGGGCCTGAAGCACGAGGATAGTGCCCTTTGTCTCCCGAGGGCGAGAG TTCACCCCTTCGGTAAGAGAAAGCGTGGAGACGAGAGTGCTAGGCTTGGA TACATGTACCCTACCTCCAGTCGCCGGCGACTTCATGGACTCCCAAAAAC TGAGCCGAAAAAGTACTCAACCGACGCATGAACGGTCTCGACCATACCAC AAAAACATGGCAGGTAGTGATAGAAAGCACCGATTAATGGCGTTCTTGTA GTTGATCGCTTCCTCCTCGGTGCGCTCCTGAAATCGCAAATTGAGGGTTT GAGTTACAAGACGAAGAAGGGATCATGCAGCAGGAATGCAGCTGGGAAAA TGTAAATGTCCTTGGTCCAAAAATCCACAACTCAACAATTTGGGGAAATC ATCCATTCATCCAAGCCCGTACAAGCGCTTTTGCTTCTTTCCTCACGCTC GTGTTCTCTTGCACGTGAACTCCAGCGGCTAGAGAGACGATCCCGGGGCA TGGTATCCACTAGAAGTACTTATCTATCTACAGAAGTACCATTTTCGGAG TAACATTTTCAAAAATGAGGCGGCGCCAAGAGCCAAGAGCCAAATGTTTT TTTTTTTTTGGTGTTCCGCCACTTTTTCCTCTCAACCGCTCCAAAAATAC AGATTACTCTCTGTACACTTACCACAAAACCATGGTACCTGTATTGTGAC TGAAGCGAGGTCCAATCTGGGGTCACAAATAAGTTTCCTGTGCGGTTTAG TCTATCCCTACGGTTTCATAGCATTGTAACTCGACATTTTTAGGCAGCTC CCTTCCTTCTCTCCTGTTGTGGTCTGCACGCTGCACGTGAAAAGCCCTCG TTGCTACTTGCTACTCATACTTATGTGCTTAGCTGTGTTTTCTTCAGCTG TTTTGCGTCCAATCGATTCTGGGTGCCGGTTTACACCTTCCGGTGATTGT GTGAAGCACCAGGCGGAGTCACAGAAGAGGGACGTAACCACTAGATTCTA TTTTTTCTCCACCGTCCCCTCTGGTATTACTTGCCTCCTCCAGTTTTTGA GGGGGCGGGGGAGTTGTGCAAATCTCCGCTTCAGCCATCCGGGAAAGGCC GGCCTTGAGCGTTTTTTCAGCGTCTTTTCCAAGTATTAATGGACCTGGTA AATCAGTCCTACAGGCACCTGGTCGTTGAACGCCTTTTCTCTCGGCAAAA TCATGGCGCAAGATGGCATTGCTGATTCTACTGTGCGGGCGTACAAGACA CGTCCGACCTCTGTCTAGTGCTCCTCTTGTGCGTCCTTTTTTGTGATGTT GTTGCCTCTCAGATCCATCCCCATTCCGTGGTATCAGGAGATGCGCAGCG TTAGGCCGGATGCCCAACCAGCGGACAGCGCAGGCCTCGGCGGCAGGGGT GGCGACAGCAGCCCCGAGTCCTTTCCGGCCGGGCATCAAAGCCGCCTGGC CGTGCCTCGCAACTGGAGGGCGAGCATGAGCAGGAGGAGGAGCGAGGGGG CAGCCGGTAGCGGCAGCGGCATCAACAGTGGCATCACCCGCGGCGGCAGC GGGAGAAAAGAGCAACAACAGTCGTCGTCGCATCTGGAGAAGGACGGGGA GTGGTTCGGCGATGCTCGCGGCGTGGCCGGCTCGGCATCTGAGAAGGTTC TGGGTGCTGCGGTGCAGGTTAGTCTTTTTGGTTGTCCGACGCCCCACAAG GCACGAGCAACCCTGCGGTGTGCAAACGAACGCACCACTTCCTTCCAGAC ATGAGTACACGCAGCTAGAAGTGTTGCTGCCGCATCAGACAGGGTTCGGT CGGCTATCCCAAAGGTGGAGAAACAGCCGAAAAGACCACTTGTGTTATCA GCACGCGCTCTGTTCATCATGCGCTCTATTCAGCTTGCGTGGGGTTGTGC CCGCTGCCCCCGATTGGCCGCCGTCGCAGTACATTCGTCGCATTGGTAGC ACACCAGCATACGTATGCGCACGTACTTGAGCTTCTTCGGCACCGCAGAC CCGACAAACGATAAACGCCGGGCGCCCGCTGGGTCGCTTAAGTACGGTTG CCCACCCCAAAACCTCAAACGCACCCGCCTTCGCTTTGCCCAGGACCAAG AGCAAGACTCCCCGGCGATGAGCCTCCTCTGCTCCATCACCAAGGCCTCG GCAAACGCAGTGCCGGAGTTGTGTTCGCCCTCGTCCTTGACGGGGGACGC GGCGGGCCCCCGACAATCGCGGCTCCGGCAGAGGGGGGGGCCGTCGCGCC CGCGGTTCTCCTCCGTCGGTAGCGCCGGTAGCGGCGGCGGGGCCGTCGGC GGGGGCAGAGGCGTTTTCGCGCCGCCCTCCGGAGAGTATTACCGCCTTCC GTGGTACCGGCGACCGCTGCCGTCGAACCGGAGAGTGGGCGTGGCCGGCG GCGGGGAGGCGACCCACCTGAAGCGGGCGAGCTCGATGATTTCCGCCCCC CGCGCGGGGTTGAGGCCGCCACCGGTGATTACCAGTGGTGCTGGCGCGGC GGCGGCGGGGGCGGCGGCGGCGGCTGGTGCGGCTTTGAATGGTGTTGCGA CTCCCGGTGGGGGAGAGAGAACGCGGGCTACTGAGCAGCGGGAGGAGAAC CAGCAGCAGGGGAAGCAGCAGCAGAGGCAGCAGCCAGACAAGCAGCAGCA GCAGCAAGACAAGCAGCAAGACGAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGCAGCAGGACAAG CAGCAGTCCCCAGCAAACGAGGTGCCCGTTTGCTTCGCGGCAACCGAGTC GCCAACGGAACGTCCCCCGTTGACCACGCCGATGCGGTCGCCGACCTCCG CCTTTGAGGCGGTGGCGGACAGGGCGGGGGCAGCGGCACAGCAGGCGGCG TCGAATGTGGTTTCTGTGAACGCACAGGCAGACGTTCACGCCACACCTAC GGCAAACTCTATGGCCGCGGACCGCGACGAGAGCACCCGGGAGGAGGGAG GTTCTGCGGACCGGAGCAGAAGCGGGGGTACTGCTGTGGCGGCGGGAACG GAACAGCCCCGCGGAACCTCTCCCGAGAAGGAGCACGCTGCTGAGTCCGA GGAGCTGGAAAAGCTGAGAGCGGAGGTTGCTCGGCTCAAGCGAGAGATGG CGTCCATGGCGGCGGCGGCGGCGACGACGGGAATCACAACCCCGAAGCAG CAGAAATCCGGTGGCAGCAGGCGCCGCCCCTCGCAGAGAATAGAGACATC GTCGCCCGTCGCTTCTTTTTCTTCTTCTCATGCCCAAGAGAAGCACCCGG CCTGGCAGTGGGACGCGACCGCAGCCGAAGGCGGGGAATCCTCGGACGCC GACGGGGCTAGCCGCCCGATGCCAAATCGCCTTCGCGCGGATAACTCCTG GATGCAGCAGCGTCGACGAAGCAGCAGCAGCAGCAGCGGCACCATGGAGA GGCGCAGCAGCGGCGGCAGGACGGAAAGGCGCTACCACCGAGATAGCATC GGCGTCGGTTTCAGCGGCAAGTCGAGGCCCGGGAGCGTGCTCCCGGCCCC GCGCAAAGACAGCAGTAACGGCGGTGAGCGGAGCAGAGGGTCTTCCGAGG ATGTCGGAGACGAAGTTGGCCTGTTGAGCCCGCCGGTAAACGGTACCAAG ATCGAGGGCCCGTCCCCCGCTTCGCGAGAGAAGGAGAAGACCGCCGCCGT CTTGGAGGGCAGACGCCGGGACAGCGGCGCCGATTCGATTAACGGGGCGA GCGGCGCAGGCGCAGGCGCAGGCGCCGGAGGCGATGGTGCCGACCGCGGC GCTCGTGGTAGCGAGAGCGCAGGCAGCGACGCTTCGGTGCGCCGCGGCGG CGCGCGCGGTAACGAGAGCGCCGGCAGCGACGCTTCGATGCGCCAGATGT CGGTCTTCTTTCCGGTTATTGCTCCGCCGGACCCCAACGCGGACGCAGGC GGCACAGAAACCGCCGAGGGAGCGGCAGCACTAGCGTCCGCGGCGGCGAC GCGGATTGGAGAAACGGTGACCCCGCCGGGGGCCTTGCGCGCGGCCCGGG CCGCCCGGGACGCCGTGTCGGCGAAGAAGCAGCTGCAACAGCAGCAGCAG CTGGCGGCGAGGCACGCGCCCGTGGTGTACGCCAAGATTCCCGTCGAGAC CGTTCGTCGGCGTGGCGGGGTCGACGGCAACGGGAGGGTCTGGCGCTGGG TGCTGGCGCAGAGGACGGAGGACCAGACGGTGCGGCAGGCCGTGATTAGC CATGGCCTCCCGCGGTTCGGGAGGCGGCACATCTGGGCGGCTTGGGCGGC GGTCGCCACGCCTGAGACGTGAGGGTGTTTTTGTTGTGGTGCTGCCGCTG CACCTTCCGTGTGGGGGGACTTTCGTTTGTGTGGTTTGCAGCCACCGAGA CGCATGCAGCAGGGGCCTTGGCCTATGCATAGGACCTGTCTACATTTACC TCAAAGCTGGTAGACTGGTACAGCGAGAAAGCTTGCACTTATAAAAAAAG AAAGAGAGGATAACCTGTGGCAGTACCACCGTGGTGTCACGAGTTTCGTG GTTGCCGAAAACACACCGCTCTGGAGAACATTTTCAGACGGCACCAGTTT CTGTCTGTCTCAGATGGCGTACCGCGTTTACTCCATGGCTGACATCGCAC GTCGACACGTCGACCATCTCTTGTCTGCCACCACCCTGTGCCCCGCCCCC CCACTCTACCCGCCATGTGCAGCTACAAGAAACCAAAGCAGTCGTCCGAC CCCGCGAAGGAGGGCTCTATCGTCAACACCATCGCGCACGATGTCGCTCG GACCAAGATAGTTCACCCGCTGTTCGGGAGCGGAGGGCAGGGGTTGGCCA TGCTCAAGCGGGTGCTAGTCCGCTGCGCGGAGCTCGGTGCCGTGAAGGAA GCCGGGTACATTCAAGTGCGTGCGTGTCGGACACCCAAGACTGGACGGAG GAGGGTTTTACTCGCTTCAGTAGTTTCACCGCTGTCTCTTGCGGAGATGG AGTAGCGGAGGGTGGTCCGTGGTTGGTTCGCCTTTGGGTGATTCCCTCGT GCATCGCACGCATGAAGTAGAAAATAAGCGTGTTACAGGTTGTGCTGTCC ATTTCTCGTGTGAATAGGGGTCGCTTTAACCGTTCACGCCCCGTGGGCTC ATAACGTGTGCAACGCAGCGTCTGGTGAATCGTAATTTTCTTTTTTGAGG AGGTGTGCCTGGTGCTGGCATTCAGTCATTGCGATGAATACCGTGTTAAC CGCTGATGGTTTCAAGAGTGAACGCAGTTGTCGTCAGCCCTTGCCCTCTT ATCCTTTTGAAGGGGAGGTCTTTTGCCATTGGTCCTACTCAGCTGATACC TAACCGGTGGTCGGCCACGCTGCTTGGCATTGTGGAATCAAGGGCTGGCT CATGTAGCACACGGAATCAACGGCATGGTTGTCCACACGAAGACGCTGTT GCCCCAATCTATCTCAGCCCGTTGGTTTAACGCATGCATTTTTATTGCGT GCGTTTCGCATCTTTTCCCGCCGGAAACACAGGGCATGAACTACCTCGCG GGTTTCATCTTGATAACCTTCGCCGACTGCGTTTTGTCCGAGCGGGAGGA CCTCAAGTCCCGCTCCAGCCGCAACAGAGCCACCAGCGGGGGCAGCAGCA CCTGCAGCAGCAATGCGCCGGCCGATTCCGCCGCAGCCGGCGACGTCACA GAGCCGTCCGACGTGCAACCCGGGCCCGCGAACGAAGGGGGTACGGCGGT GGAGACGGAGGGTAAGGGCGGGGAGGCGGAGAAGGAGGCGGCCGTGAAAG AACCAACGGTGGCCGAGGTTGCCCAGATAGAGAACGAGTGCGTGCAGATG TTGCAGGGGGTCATCGCGCTCCAGGGGGGCGTGCTGTCCAGAGACCTGTG GGGCTTGCATGCGGTGAGTGGAGGGGGTGGGGGGCGGGGGGTAGCAGGGG TCGCCTGTACATGGCAGAATTCTGAAAGGAGTGGGTGGCGAAGGATTGAG GGGGAGGGAGGCACGTGGTGGCACGCTGTAGTAGTGTCGGGCTCAGCATG TTGACCGTTGGTGTTTCATTTTCTGGTCTGTTTTTGGCCAGCATGAGCAC AGCCGTCAATGGCAGTCGGCATTCCGAGTGTGCTGCGCTCGCGCGTGTGT GTGTCTTTGCTATTAGCGTCAACGGCGCTAGCTGGCTGACCAAATGCGAA AACGTCACGTGTGTGTGTGTGTATCCCATTTTTTTGTTCTCTCTATACAC CATAGTACGGCCCTTCTTTAAGCTTGTGGTTGGACCGTGCTTTGATGTTG CTGTGGTTGCATCGCCAATCATCACTTGTGCGCCGCAACCCTTTCTTGGG CGCCTCTGATGTGCCCTGTGGCGGTTTCCGTTCTTTTTTTTGTCCAGAAC ACGGAGCTTGTGGAAGACCTGCTTTCGAGGCAGTGCCCGGACGTCATGGA GCACTTGAGGAAGGTTAACCTCGAGCTAATCGTTCTTACGCCCAGGTGAC CGATCCGCTTGTGTTTGAGTCTGTTCAACATACCGTGGCAGGTGACGCAA GGTATCACACCCCCTGGGCTGATTTTCAAAGCTCGATTACTCCACAGCAG AAACAGTCGCGGTGCGGAGAATGGCGGCGTTGGAACCGCCTCCTCAAGAG CTTTCCGAAAACGTATCCTTTGGATTGTGAATCTTCTTCGTCGTGGAGCA TTCGAGCTCTGAAAATCGGTCCAAGGGGTGTGTTATCTTGTGTCACGTTA CTGGACCGTTCGGTGACCCGACGACCGACCGATGCAAGCGCTTTGCTTGC GAGGGGCGAGTGGGGGAGAAAGGCGGTTTCAGCATCACGAAGGAGGTTGC TGTTCGATGATCGAGTCCTGCACAGGTTGATGTCGGTAGTGAAACAAGGG TACCGGAGTTTTGTGTTTCCGCCGAAACGGCGTGTGTTGGCGGCGTACTT CTGGTCGCTGCGAAAAGACGCGAGGTCGTTGTCAAGGTCGTCATGGTGGT CCTACTGCTGTGTGAGCAGAGCAAACATCACGAGCACCTGTCATGCGTTC GTTCTGAACGCAACAACTACCACAACGAGCGGTTGAGTGGTGGGGACTTG TTTCCGCGGGGGCGGCAGTGGCTGTTGTGGTGGAAAGTCGGCGACAAAGA GCGGAGATCAGCTCCAGATAAATCGAGACGACGCTTGGGCTTCCGTAGCG GAGTATCTCGCGCTGAGGAGACGACCGGATGCAGAGTTGTGGTGGTTATT TTGTCATCGTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCAG CTGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGATGCTGCCGCTACTGTC CCCGCCGTGCTTTTGCTCGGAAGCGGGGCCGTAGTTTGGTCCAAAGTCTG CGGCGGCACGCATGCGTTAGAATATGAAAGAAAACATAGTTGTACGTGTG CTCAGGCCTTTTCTATGCCGTCTGCACCGTTCGGTGCGTTTTTTTTTCGC CTTCGGGGGTCGTCCCGACGGTTAGAACACGTTCTTGCCGGCCTTACCCC ACGCGGATAATCTGGTTATCGTCTCTCATTCTGCTCTCCCTTCAAAGCGC TCTTGTTGTTGTTGTTGTTGTTGTTTTTGTTTTCATCATTCCCACAAGTG TTTTACACCGCCAGCGTTCATCTCCACGTCTCTTTCCTTGCAACAGGTGG TTCATCTGCATCTACGCCGGGTCGATGTCCAACCAGTCCGTGGTTACCCG CATCTGGGACCTCTTTATGTGGTACGGGCGCCGCGGGCCGGCGGTTCTGG TCTGGGTTGCGCTCGCGGTGCTGCACGGATGCCGGCAGGGCATGTTCGAG AGCCATGGCCTGCCCGCAACTGTGAAGGCGGTGCGGCGGTACGCGGAGGG GTGCAAGACTTTCGACGACTTGGTTCGCCAGGCTCCTGTTGGCCTGAATC AGGTGAATATCCCGGGGCAGCGAGGACGGGCTACAGCAACGCTTCATCTA TCATTTGTTGCCGTGGGATGCATAAGTGTATGGGGGCAGCGAGACTCTTT GCTTCGGCTCTGGGAGATCTTTCCTCGTATACAGAGTCGGTCGTCCTTGT GTTTTTGGGCTTCAGTACTCGCTGTGCCGGGGCGGTCTGTCTGAGGTTGG GTAAGCTGTGTTTTGATTGTATGCATTAGGTAGGTATTTTGGGGGCGACC GCTCTGAACGAGAATGGCAGTGGTCGATCTGACGCACCCAGGTGAGATAG ATTGGCATCTATTTTAGCCTTGTTCTATGCATACGGGAGTGTTTTAGCGT ATGCTAGCCATCTTACAGTGTCAAGAAGAAGGTGCATCATTGCCACGCGC TTGCCGAGAGGTAGAGAGAGGGAGATAGATGTAATGGTGGACAACTTGGT GCTTTGATTGTTCCGGTTCGTGGCAGGTGGTGGCCGCTTGGGAGGAGCAG GGCAACAACCGGAAGATCGCCTTGTTGGACGGAGAGGGGGCCCTTCCAGA CAGGATGGCGGCCGGCTTGGTCGAAGAAATGACTGGCGAGCCGGTCTACC TGCCGCCGCCAGGTCAGAGCCGACCGGCTGCTCAATTTATTACTTTCCCC CGTTCCGTCCGCCCGTCTTTCTTTGCCGTGTTTCACTCCGATGGTGGTGT CTTCCCCTCCTCTGTGCTCGGAGACTAACGAGCACCGCGATGGGCTTGTC TCCGCTGTTGCATTTCCGCGCGAACTCGTCGCCTTGACATCAAGACAGTC CCTTGCTCCAGCCAGAAAAATCATCGTGGTCATCCTTGCACCGACCCACC ACCCACACCCGATCCCGCCCTCCCGCCAACTCTCGTGTTTGTTCTCGACC AGAAGTCCTCAGCCCGCCGCGGCACCGCCGCAGCCCGAGCGGCTTGGCCC CGGTGGCCGCAACGTCCACGGCCTTCGGCATCCAGTTCCCCTCGACCCCG GGCCGACCCCCGACACCGCTCACCTCCCCGCGGTCCCCCTTCCCGGAGTG GGCGGCCAACATCTTCAGGAGCAGCACCGGTGGGCCGAACGAAGACGGAG GCGGCGTGCCTGCTAGCGTGGACGTTGGGAGTGTGAACGGGGGGCGCGGC GGGGGCGGGGGCGGGGGCGGGGGTGGGGGCGATAACCTGCCCCCCACGTC GCCCAGGTTCTCGACACCCTCGAGGCAGAGGCAGCTGAGGCGCGCGGCTA GCACATCGTGGTGGTGAAAACTGAAACGATTGGGCTGTCTGCGTTTTTGT CGGTCGATGTTGTCGTCCCCCCGTCCTCGCCTTTACGTTTTCATCTAATA CCGTATTCGACTCGAGATTCAAATCTCGGAGTATTACTTGTATGTTCAGC CGCATACCAGCAATTGGCTGCTGACAAGCCCGAGTGCATCATTGTTACAA TACTCCCTTGTCGTTTTGTTACATGGTAGGGATTCGCCGGAACACAAAGC GTTGGAAATGGTGTGGTGGCGGTCTGCAACGCTGTGCGCAGCGGTGTGGG GTTGGCAGAGAGCCCTCTCTCCCCGTTGTTTGTTGACGACTATCTGTTGA TTAATCCGAGGTTTGGTAGTAGTTTGTTTATGAAGGCAGTTGCTGCGTGT TTTCCCTCGCGTGTTGTGCAGTCGCTGTTTTTGCCTGAGTTTGTTGGCCT GCTGCTGTAGAAAAATGGGTACCGTGCGGGTGTTTTGTGTGATGTGGTAG TTGAAATCCAAGCTGTTGATGGAGGCCAGAGTTCAATCGTTTCATTTGTT TCGGTCACGTTGGGTTTTCGGTGTGTCGGGAAGAGGAGAGGGTGCGAGTT GTTGATGTCCTGTACTTGACCGCTGTGTTGGCGGGAAGTGTTTGCCTCCA ATTCTTCTTCCTGGAGGGCGAGGGGGGGGTCAGTCGAGCCTTCTGGTGAG CATGTTTTCCTCGTGTGTTAGCGACATGATGGTATGATCGGTGGGTCAAT TCTTTGGAGTCTTCTCACCGGGAGGTCAGTTGGCTTTTACCAGCAGTTCA GATCGGGACAAAGACGGCTACACCACCTAGCTGCGCGTGTGTGTGGGTGG TGGGTGTTTGGGTGGTGGAAGCTGTGTGTGTGATAACCCATTTCTCTAGA CGTCAGTTTTACATCTTTCTTGATTGTTTAGACGCACCAGCCGCGGTTAT TCTCAGGAGAAGAGTCAGACTCGCTTGTCCCCCCCCCACTTTCTACACCT TCGACCCTGTGGTTGCATCCATTTCCATCGAGAGAACGGTTGAGGGGTCC CTTTTCCCCTCGTCGACCGTGAAGTCGAATTTGTGCGCCCACGGCTTATA GTCGTTGTACACCTTGCTTTAGTGGGGAAATTATGAGCGAAATGCACTTG CTGCAAGCTTCATTCCTGGAGCAAATTGTCCGTGTTCCCAGAGAAGACAG TCCCTTGGCCAAATAACATGGAGGGTTAAATAGTTGCTCCCGAATTGTCA AGGCTGGACGCATTTTCTGGGGCAGGACGTATGTATACGCTCGTGGCGGG GGACTCTGAAAAATGTGTACACAGTTTAATATTTTATTGGTGTCTTGTAG GGATAGCTTGTAGCAAGAGGAGGGTGCTTGGACCGGGAGAACCACGTGTC GGTATCGGCGTCGCAGGGTTCTTTTGGTAGCCGGTAGTCGGTGTGATGGG GAGACAGATTGTAGTGACGGGTCATGCGAAAGAAGCTGTCGCATGCGACA AAAGCACGTGGTGTTTTTCATACGTGTAGCCTTGCTGGGGAGCTTTTGAC ACGTTGTTGGCGAAGGAAGAGAGCGATCTGGAACCACCGGCTGTACAGAC TCGTGTCCCCGGTGAACGACGTGACTTACGTCGCTGTACGTTGTGTGTAC AAGTGTTAATGCGAGG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig143:45436..56301+

>mRNA_E-siliculosus-1a_F_contig143.2532.1 ID=mRNA_E-siliculosus-1a_F_contig143.2532.1|Name=mRNA_E-siliculosus-1a_F_contig143.2532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7962bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:45436..56301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGCAGCGTTAGGCCGGATGCCCAACCAGCGGACAGCGCAGGCCTCGG
CGGCAGGGGTGGCGACAGCAGCCCCGAGTCCTTTCCGGCCGGGCATCAAA
GCCGCCTGGCCGTGCCTCGCAACTGGAGGGCGAGCATGAGCAGGAGGAGG
AGCGAGGGGGCAGCCGGTAGCGGCAGCGGCATCAACAGTGGCATCACCCG
CGGCGGCAGCGGGAGAAAAGAGCAACAACAGTCGTCGTCGCATCTGGAGA
AGGACGGGGAGTGGTTCGGCGATGCTCGCGGCGTGGCCGGCTCGGCATCT
GAGAAGGTTCTGGGTGCTGCGGTGCAGATGCGCAGCGTTAGGCCGGATGC
CCAACCAGCGGACAGCGCAGGCCTCGGCGGCAGGGGTGGCGACAGCAGCC
CCGAGTCCTTTCCGGCCGGGCATCAAAGCCGCCTGGCCGTGCCTCGCAAC
TGGAGGGCGAGCATGAGCAGGAGGAGGAGCGAGGGGGCAGCCGGTAGCGG
CAGCGGCATCAACAGTGGCATCACCCGCGGCGGCAGCGGGAGAAAAGAGC
AACAACAGTCGTCGTCGCATCTGGAGAAGGACGGGGAGTGGTTCGGCGAT
GCTCGCGGCGTGGCCGGCTCGGCATCTGAGAAGGTTCTGGGTGCTGCGGT
GCAGGACCAAGAGCAAGACTCCCCGGCGATGAGCCTCCTCTGCTCCATCA
CCAAGGCCTCGGCAAACGCAGTGCCGGAGTTGTGTTCGCCCTCGTCCTTG
ACGGGGGACGCGGCGGGCCCCCGACAATCGCGGCTCCGGCAGAGGGGGGG
GCCGTCGCGCCCGCGGTTCTCCTCCGTCGGTAGCGCCGGTAGCGGCGGCG
GGGCCGTCGGCGGGGGCAGAGGCGTTTTCGCGCCGCCCTCCGGAGAGTAT
TACCGCCTTCCGTGGTACCGGCGACCGCTGCCGTCGAACCGGAGAGTGGG
CGTGGCCGGCGGCGGGGAGGCGACCCACCTGAAGCGGGCGAGCTCGATGA
TTTCCGCCCCCCGCGCGGGGTTGAGGCCGCCACCGGTGATTACCAGTGGT
GCTGGCGCGGCGGCGGCGGGGGCGGCGGCGGCGGCTGGTGCGGCTTTGAA
TGGTGTTGCGACTCCCGGTGGGGGAGAGAGAACGCGGGCTACTGAGCAGC
GGGAGGAGAACCAGCAGCAGGGGAAGCAGCAGCAGAGGCAGCAGCCAGAC
AAGCAGCAGCAGCAGCAAGACAAGCAGCAAGACGAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACAAGC
AGCAGGACAAGCAGCAGTCCCCAGCAAACGAGGTGCCCGTTTGCTTCGCG
GCAACCGAGTCGCCAACGGAACGTCCCCCGTTGACCACGCCGATGCGGTC
GCCGACCTCCGCCTTTGAGGCGGTGGCGGACAGGGCGGGGGCAGCGGCAC
AGCAGGCGGCGTCGAATGTGGTTTCTGTGAACGCACAGGCAGACGTTCAC
GCCACACCTACGGCAAACTCTATGGCCGCGGACCGCGACGAGAGCACCCG
GGAGGAGGGAGGTTCTGCGGACCGGAGCAGAAGCGGGGGTACTGCTGTGG
CGGCGGGAACGGAACAGCCCCGCGGAACCTCTCCCGAGAAGGAGCACGCT
GCTGAGTCCGAGGAGCTGGAAAAGCTGAGAGCGGAGGTTGCTCGGCTCAA
GCGAGAGATGGCGTCCATGGCGGCGGCGGCGGCGACGACGGGAATCACAA
CCCCGAAGCAGCAGAAATCCGGTGGCAGCAGGCGCCGCCCCTCGCAGAGA
ATAGAGACATCGTCGCCCGTCGCTTCTTTTTCTTCTTCTCATGCCCAAGA
GAAGCACCCGGCCTGGCAGTGGGACGCGACCGCAGCCGAAGGCGGGGAAT
CCTCGGACGCCGACGGGGCTAGCCGCCCGATGCCAAATCGCCTTCGCGCG
GATAACTCCTGGATGCAGCAGCGTCGACGAAGCAGCAGCAGCAGCAGCGG
CACCATGGAGAGGCGCAGCAGCGGCGGCAGGACGGAAAGGCGCTACCACC
GAGATAGCATCGGCGTCGGTTTCAGCGGCAAGTCGAGGCCCGGGAGCGTG
CTCCCGGCCCCGCGCAAAGACAGCAGTAACGGCGGTGAGCGGAGCAGAGG
GTCTTCCGAGGATGTCGGAGACGAAGTTGGCCTGTTGAGCCCGCCGGTAA
ACGGTACCAAGATCGAGGGCCCGTCCCCCGCTTCGCGAGAGAAGGAGAAG
ACCGCCGCCGTCTTGGAGGGCAGACGCCGGGACAGCGGCGCCGATTCGAT
TAACGGGGCGAGCGGCGCAGGCGCAGGCGCAGGCGCCGGAGGCGATGGTG
CCGACCGCGGCGCTCGTGGTAGCGAGAGCGCAGGCAGCGACGCTTCGGTG
CGCCGCGGCGGCGCGCGCGGTAACGAGAGCGCCGGCAGCGACGCTTCGAT
GCGCCAGATGTCGGTCTTCTTTCCGGTTATTGCTCCGCCGGACCCCAACG
CGGACGCAGGCGGCACAGAAACCGCCGAGGGAGCGGCAGCACTAGCGTCC
GCGGCGGCGACGCGGATTGGAGAAACGGTGACCCCGCCGGGGGCCTTGCG
CGCGGCCCGGGCCGCCCGGGACGCCGTGTCGGCGAAGAAGCAGCTGCAAC
AGCAGCAGCAGCTGGCGGCGAGGCACGCGCCCGTGGTGTACGCCAAGATT
CCCGTCGAGACCGTTCGTCGGCGTGGCGGGGTCGACGGCAACGGGAGGGT
CTGGCGCTGGGTGCTGGCGCAGAGGACGGAGGACCAGACGGTGCGGCAGG
CCGTGATTAGCCATGGCCTCCCGCGGTTCGGGAGGCGGCACATCTGGGCG
GCTTGGGCGGCGGTCGCCACGCCTGAGACGACCAAGAGCAAGACTCCCCG
GCGATGAGCCTCCTCTGCTCCATCACCAAGGCCTCGGCAAACGCAGTGCC
GGAGTTGTGTTCGCCCTCGTCCTTGACGGGGGACGCGGCGGGCCCCCGAC
AATCGCGGCTCCGGCAGAGGGGGGGGCCGTCGCGCCCGCGGTTCTCCTCC
GTCGGTAGCGCCGGTAGCGGCGGCGGGGCCGTCGGCGGGGGCAGAGGCGT
TTTCGCGCCGCCCTCCGGAGAGTATTACCGCCTTCCGTGGTACCGGCGAC
CGCTGCCGTCGAACCGGAGAGTGGGCGTGGCCGGCGGCGGGGAGGCGACC
CACCTGAAGCGGGCGAGCTCGATGATTTCCGCCCCCCGCGCGGGGTTGAG
GCCGCCACCGGTGATTACCAGTGGTGCTGGCGCGGCGGCGGCGGGGGCGG
CGGCGGCGGCTGGTGCGGCTTTGAATGGTGTTGCGACTCCCGGTGGGGGA
GAGAGAACGCGGGCTACTGAGCAGCGGGAGGAGAACCAGCAGCAGGGGAA
GCAGCAGCAGAGGCAGCAGCCAGACAAGCAGCAGCAGCAGCAAGACAAGC
AGCAAGACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGGACAAGCAGCAGGACAAGCAGCAGTCCCCAGC
AAACGAGGTGCCCGTTTGCTTCGCGGCAACCGAGTCGCCAACGGAACGTC
CCCCGTTGACCACGCCGATGCGGTCGCCGACCTCCGCCTTTGAGGCGGTG
GCGGACAGGGCGGGGGCAGCGGCACAGCAGGCGGCGTCGAATGTGGTTTC
TGTGAACGCACAGGCAGACGTTCACGCCACACCTACGGCAAACTCTATGG
CCGCGGACCGCGACGAGAGCACCCGGGAGGAGGGAGGTTCTGCGGACCGG
AGCAGAAGCGGGGGTACTGCTGTGGCGGCGGGAACGGAACAGCCCCGCGG
AACCTCTCCCGAGAAGGAGCACGCTGCTGAGTCCGAGGAGCTGGAAAAGC
TGAGAGCGGAGGTTGCTCGGCTCAAGCGAGAGATGGCGTCCATGGCGGCG
GCGGCGGCGACGACGGGAATCACAACCCCGAAGCAGCAGAAATCCGGTGG
CAGCAGGCGCCGCCCCTCGCAGAGAATAGAGACATCGTCGCCCGTCGCTT
CTTTTTCTTCTTCTCATGCCCAAGAGAAGCACCCGGCCTGGCAGTGGGAC
GCGACCGCAGCCGAAGGCGGGGAATCCTCGGACGCCGACGGGGCTAGCCG
CCCGATGCCAAATCGCCTTCGCGCGGATAACTCCTGGATGCAGCAGCGTC
GACGAAGCAGCAGCAGCAGCAGCGGCACCATGGAGAGGCGCAGCAGCGGC
GGCAGGACGGAAAGGCGCTACCACCGAGATAGCATCGGCGTCGGTTTCAG
CGGCAAGTCGAGGCCCGGGAGCGTGCTCCCGGCCCCGCGCAAAGACAGCA
GTAACGGCGGTGAGCGGAGCAGAGGGTCTTCCGAGGATGTCGGAGACGAA
GTTGGCCTGTTGAGCCCGCCGGTAAACGGTACCAAGATCGAGGGCCCGTC
CCCCGCTTCGCGAGAGAAGGAGAAGACCGCCGCCGTCTTGGAGGGCAGAC
GCCGGGACAGCGGCGCCGATTCGATTAACGGGGCGAGCGGCGCAGGCGCA
GGCGCAGGCGCCGGAGGCGATGGTGCCGACCGCGGCGCTCGTGGTAGCGA
GAGCGCAGGCAGCGACGCTTCGGTGCGCCGCGGCGGCGCGCGCGGTAACG
AGAGCGCCGGCAGCGACGCTTCGATGCGCCAGATGTCGGTCTTCTTTCCG
GTTATTGCTCCGCCGGACCCCAACGCGGACGCAGGCGGCACAGAAACCGC
CGAGGGAGCGGCAGCACTAGCGTCCGCGGCGGCGACGCGGATTGGAGAAA
CGGTGACCCCGCCGGGGGCCTTGCGCGCGGCCCGGGCCGCCCGGGACGCC
GTGTCGGCGAAGAAGCAGCTGCAACAGCAGCAGCAGCTGGCGGCGAGGCA
CGCGCCCGTGGTGTACGCCAAGATTCCCGTCGAGACCGTTCGTCGGCGTG
GCGGGGTCGACGGCAACGGGAGGGTCTGGCGCTGGGTGCTGGCGCAGAGG
ACGGAGGACCAGACGGTGCGGCAGGCCGTGATTAGCCATGGCCTCCCGCG
GTTCGGGAGGCGGCACATCTGGGCGGCTTGGGCGGCGGTCGCCACGCCTG
AGACCTACAAGAAACCAAAGCAGTCGTCCGACCCCGCGAAGGAGGGCTCT
ATCGTCAACACCATCGCGCACGATGTCGCTCGGACCAAGATAGTTCACCC
GCTGTTCGGGAGCGGAGGGCAGGGGTTGGCCATGCTCAAGCGGGTGCTAG
TCCGCTGCGCGGAGCTCGGTGCCGTGAAGGAAGCCGGGTACATTCAACTA
CAAGAAACCAAAGCAGTCGTCCGACCCCGCGAAGGAGGGCTCTATCGTCA
ACACCATCGCGCACGATGTCGCTCGGACCAAGATAGTTCACCCGCTGTTC
GGGAGCGGAGGGCAGGGGTTGGCCATGCTCAAGCGGGTGCTAGTCCGCTG
CGCGGAGCTCGGTGCCGTGAAGGAAGCCGGGTACATTCAAGGCATGAACT
ACCTCGCGGGTTTCATCTTGATAACCTTCGCCGACTGCGTTTTGTCCGAG
CGGGAGGACCTCAAGTCCCGCTCCAGCCGCAACAGAGCCACCAGCGGGGG
CAGCAGCACCTGCAGCAGCAATGCGCCGGCCGATTCCGCCGCAGCCGGCG
ACGTCACAGAGCCGTCCGACGTGCAACCCGGGCCCGCGAACGAAGGGGGT
ACGGCGGTGGAGACGGAGGGTAAGGGCGGGGAGGCGGAGAAGGAGGCGGC
CGTGAAAGAACCAACGGTGGCCGAGGTTGCCCAGATAGAGAACGAGTGCG
TGCAGATGTTGCAGGGGGTCATCGCGCTCCAGGGGGGCGTGCTGTCCAGA
GACCTGTGGGGCTTGCATGCGGGCATGAACTACCTCGCGGGTTTCATCTT
GATAACCTTCGCCGACTGCGTTTTGTCCGAGCGGGAGGACCTCAAGTCCC
GCTCCAGCCGCAACAGAGCCACCAGCGGGGGCAGCAGCACCTGCAGCAGC
AATGCGCCGGCCGATTCCGCCGCAGCCGGCGACGTCACAGAGCCGTCCGA
CGTGCAACCCGGGCCCGCGAACGAAGGGGGTACGGCGGTGGAGACGGAGG
GTAAGGGCGGGGAGGCGGAGAAGGAGGCGGCCGTGAAAGAACCAACGGTG
GCCGAGGTTGCCCAGATAGAGAACGAGTGCGTGCAGATGTTGCAGGGGGT
CATCGCGCTCCAGGGGGGCGTGCTGTCCAGAGACCTGTGGGGCTTGCATG
CGAACACGGAGCTTGTGGAAGACCTGCTTTCGAGGCAGTGCCCGGACGTC
ATGGAGCACTTGAGGAAGGTTAACCTCGAGCTAATCGTTCTTACGCCCAG
AACACGGAGCTTGTGGAAGACCTGCTTTCGAGGCAGTGCCCGGACGTCAT
GGAGCACTTGAGGAAGGTTAACCTCGAGCTAATCGTTCTTACGCCCAGGT
GGTTCATCTGCATCTACGCCGGGTCGATGTCCAACCAGTCCGTGGTTACC
CGCATCTGGGACCTCTTTATGTGGTACGGGCGCCGCGGGCCGGCGGTTCT
GGTCTGGGTTGCGCTCGCGGTGCTGCACGGATGCCGGCAGGGCATGTTCG
AGAGCCATGGCCTGCCCGCAACTGTGAAGGCGGTGCGGCGGTACGCGGAG
GGGTGCAAGACTTTCGACGACTTGGTTCGCCAGGCTCCTGTTGGCCTGAA
TCAGGTGGTTCATCTGCATCTACGCCGGGTCGATGTCCAACCAGTCCGTG
GTTACCCGCATCTGGGACCTCTTTATGTGGTACGGGCGCCGCGGGCCGGC
GGTTCTGGTCTGGGTTGCGCTCGCGGTGCTGCACGGATGCCGGCAGGGCA
TGTTCGAGAGCCATGGCCTGCCCGCAACTGTGAAGGCGGTGCGGCGGTAC
GCGGAGGGGTGCAAGACTTTCGACGACTTGGTTCGCCAGGCTCCTGTTGG
CCTGAATCAGGTGGTGGCCGCTTGGGAGGAGCAGGGCAACAACCGGAAGA
TCGCCTTGTTGGACGGAGAGGGGGCCCTTCCAGACAGGATGGCGGCCGGC
TTGGTCGAAGAAATGACTGGCGAGCCGGTCTACCTGCCGCCGCCAGGTGG
TGGCCGCTTGGGAGGAGCAGGGCAACAACCGGAAGATCGCCTTGTTGGAC
GGAGAGGGGGCCCTTCCAGACAGGATGGCGGCCGGCTTGGTCGAAGAAAT
GACTGGCGAGCCGGTCTACCTGCCGCCGCCAGAAGTCCTCAGCCCGCCGC
GGCACCGCCGCAGCCCGAGCGGCTTGGCCCCGGTGGCCGCAACGTCCACG
GCCTTCGGCATCCAGTTCCCCTCGACCCCGGGCCGACCCCCGACACCGCT
CACCTCCCCGCGGTCCCCCTTCCCGGAGTGGGCGGCCAACATCTTCAGGA
GCAGCACCGGTGGGCCGAACGAAGACGGAGGCGGCGTGCCTGCTAGCGTG
GACGTTGGGAGTGTGAACGGGGGGCGCGGCGGGGGCGGGGGCGGGGGCGG
GGGTGGGGGCGATAACCTGCCCCCCACGTCGCCCAGGTTCTCGACACCCT
CGAGGCAGAGGCAGCTGAGGCGCGCGGCTAGCACATCGTGGTGGTGAAAG
TCCTCAGCCCGCCGCGGCACCGCCGCAGCCCGAGCGGCTTGGCCCCGGTG
GCCGCAACGTCCACGGCCTTCGGCATCCAGTTCCCCTCGACCCCGGGCCG
ACCCCCGACACCGCTCACCTCCCCGCGGTCCCCCTTCCCGGAGTGGGCGG
CCAACATCTTCAGGAGCAGCACCGGTGGGCCGAACGAAGACGGAGGCGGC
GTGCCTGCTAGCGTGGACGTTGGGAGTGTGAACGGGGGGCGCGGCGGGGG
CGGGGGCGGGGGCGGGGGTGGGGGCGATAACCTGCCCCCCACGTCGCCCA
GGTTCTCGACACCCTCGAGGCAGAGGCAGCTGAGGCGCGCGGCTAGCACA
TCGTGGTGGTGA
back to top