mRNA_E-siliculosus-1a_F_contig1370.2216.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1370.2216.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1370.2216.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1370.2216.1 vs. uniprot
Match: D8LE74_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE74_ECTSI)

HSP 1 Score: 591 bits (1524), Expect = 1.970e-191
Identity = 438/657 (66.67%), Postives = 442/657 (67.28%), Query Frame = 1

Query:    1 STELAVAANNQARRSAVSAGTPVAMLRQSVAGSIDAVNDEDGPMVAKMAEEAGDGEVVEGSARIRIQPLDTRLRLHFKQTQGFSMRSRVNFGKTHMMASHPGPVNLSTAKLVESGMTYVEARKKIARATREAHQQFVREGEQQLAKEMSFRDVNERAKNAHTLGTATLTNKIERMHRRGRERQARQMLEWNEEAFQERQXXXXXXXXSSAYQLRKSSSRGRTVPIGDTPDHRHRTLATTAQEQTQATPSSSRQLLADSVPTGNCPSAKQPKGDTPGDRKPTNRLITTDLETRHTQQTVDSAGQPLGTHQEEAGVGIDAKDRDGARRKRKGGDSAGDSKDIAFVLRKLYTGGGLDAQQQGWKCMPTNLFNTLTMQLGTLSKINMPRNSLELLISLRNPNFSCAHMRSVGEINLSGNKLRELPEEAQRLTSLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGETSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARGKRNEKQRWEAALNVSTGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKLRSLPSSI 1971
            STELAV ANNQARRSAV AGTPV MLRQSVAGS+DA NDEDGPMVAKMAEEAGDGEV EGSARIRIQPLDTRLRLHFKQTQGFSMRSRVNFGKTHMMASHPGPVNLSTAKLVESGMTYVEARKKIARATREAHQQF REGEQQLAKEMSFRDVNERA+NAHTLGTATLTNKIERMHRRGRERQ                                                                                                                                                                                                     INMPRNSLELLISLRNPNFSCAHMRSVGEINLSGNKLRELPEEAQRLTSLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGETSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARG       WEAALN+STGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKLRSLPS +
Sbjct:    2 STELAVTANNQARRSAVRAGTPVVMLRQSVAGSVDAANDEDGPMVAKMAEEAGDGEV-EGSARIRIQPLDTRLRLHFKQTQGFSMRSRVNFGKTHMMASHPGPVNLSTAKLVESGMTYVEARKKIARATREAHQQFAREGEQQLAKEMSFRDVNERAQNAHTLGTATLTNKIERMHRRGRERQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INMPRNSLELLISLRNPNFSCAHMRSVGEINLSGNKLRELPEEAQRLTSLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGETSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARGI----YEWEAALNISTGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKLRSLPSRL 456

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1370.2216.1 vs. uniprot
Match: A0A836CM02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM02_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.720e-33
Identity = 242/507 (47.73%), Postives = 291/507 (57.40%), Query Frame = 1

Query:  994 DSAGDSKDIAFVLRKLYTGGGLDAQQQGWKCMPTNLFNTLTM--------------------QLGTLSKINMPRNSLELLISLRNPNFSCAHMRSVGEINLSGNKLRELPEEAQRLTSLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDX---------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGETSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARGKRNEKQRWEAALNVSTGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKLRSLPSSICWCHNLEVLEANDNYLEKLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADPPAELLLLGMGAMLWECRKRHWMQVRGPPPVVRVHGFGIEAS 2427
            D+  D+  +   +R+L T G LD  QQG   +P ++  TL +                    QLG L ++N+PRN L+ L+++ N   SCAH RSV ++NLSGN L  LP E  R  +L+T    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FG+                                         D N+MPHLA+PP L+T+      A+   R   D   E   + + G                          L  G+  YN+ R ELA RG       W +  +  TG+V Y+NNVN     A+PACM+RLG +  L  LK ++N+LRSLP+S+C C                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L DPPA LLL G  A+L+ECRKR++ Q +G PP V VH +GI+  
Sbjct:  157 DARADAAQLLHGVRRLLTAGVLDLPQQGLAALPPDVSTTLALXXXXXXXXXXXXXXPCSDLQQLGGLRRVNLPRNELKQLLTVDNAALSCAHFRSVTDMNLSGNGLTALPAEMGRCVALQTLRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAFGELKRLTSLDVSRCLEWLDVSSNMLSALPPTLPLMLALAHLDLDNNSMPHLAIPPALRTTEAGTDAAAAAARRGHDANCEPAEHCIAG--------------------------LQEGSSAYNKHRTELADRGI----FEWSSVPDPETGRVTYLNNVNGDRSDALPACMDRLGSLASLTCLKANRNRLRSLPASVCHCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDPPASLLLQGTDALLFECRKRYYAQQKGLPPAVGVHQYGIQGE 633

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1370.2216.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1370.2216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LE74_ECTSI	1.970e-191	66.67	Leucine rich repeat protein n=1 Tax=Ectocarpus sil...	[more]
A0A836CM02_9STRA	4.720e-33	47.73	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1370	contig	E-siliculosus-1a_F_contig1370:1860..11397 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	0
Stop	1
Cds size	2442
Model size	2442
Exons	14
Ec32 ortholog	Ec-00_001180.3
Ec32 ortholog description	Leucine rich repeat protein
Hectar predicted targeting category	other localisation
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	S
EggNOG OGs	COG4886@1,KOG0619@2759
EggNOG free text desc.	regulation of response to stimulus
Seed eggNOG ortholog	2880.D8LE74
Seed ortholog evalue	2.2e-167
Seed ortholog score	596.3
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1370.2216.1	prot_E-siliculosus-1a_F_contig1370.2216.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1370 1860..11397 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1370:1860..11397+
coding sequence from alignment at E-siliculosus-1a_F_contig1370:1860..11397+

protein sequence of mRNA_E-siliculosus-1a_F_contig1370.2216.1

>prot_E-siliculosus-1a_F_contig1370.2216.1 ID=prot_E-siliculosus-1a_F_contig1370.2216.1|Name=mRNA_E-siliculosus-1a_F_contig1370.2216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=814bp
STELAVAANNQARRSAVSAGTPVAMLRQSVAGSIDAVNDEDGPMVAKMAE
EAGDGEVVEGSARIRIQPLDTRLRLHFKQTQGFSMRSRVNFGKTHMMASH
PGPVNLSTAKLVESGMTYVEARKKIARATREAHQQFVREGEQQLAKEMSF
RDVNERAKNAHTLGTATLTNKIERMHRRGRERQARQMLEWNEEAFQERQQ
QQRKKEKSSAYQLRKSSSRGRTVPIGDTPDHRHRTLATTAQEQTQATPSS
SRQLLADSVPTGNCPSAKQPKGDTPGDRKPTNRLITTDLETRHTQQTVDS
AGQPLGTHQEEAGVGIDAKDRDGARRKRKGGDSAGDSKDIAFVLRKLYTG
GGLDAQQQGWKCMPTNLFNTLTMQLGTLSKINMPRNSLELLISLRNPNFS
CAHMRSVGEINLSGNKLRELPEEAQRLTSLKTLRLDNNKLSGLPDGLLNL
TSLTHLSLRHNNFSNLPNRFGDLHRLEKLDLGENMLKTLPPTMNLLTSLK
HLKLDGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGE
TSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARGKRNEKQ
RWEAALNVSTGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKL
RSLPSSICWCHNLEVLEANDNYLEKLPARLGEMKQLRHLRLDVNCLTELP
SSMVQLDRLEELCLTSNFFATFPDFAMKMSGLKKLLLGNNQLKKLPYSVG
FLTSLKTLQLYNNPLADPPAELLLLGMGAMLWECRKRHWMQVRGPPPVVR
VHGFGIEASGGNM*

mRNA from alignment at E-siliculosus-1a_F_contig1370:1860..11397+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1370.2216.1 ID=mRNA_E-siliculosus-1a_F_contig1370.2216.1|Name=mRNA_E-siliculosus-1a_F_contig1370.2216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9538bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1370:1860..11397+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCGACAGAGCTGGCCGTCGCAGCAAACAACCAAGCCAGGCGCAGCGCAGT
GAGCGCGGGCACTCCAGTGGCGATGCTCCGGCAAAGTGTTGCTGGCTCCA
TCGATGCCGTCAACGACGAAGACGGCCCGATGGTGGCGAAAATGGCAGAG
GAGGCTGGGGACGGCGAGGTTGTTGAAGGGTCGGCAAGGATTAGAATACA
GCCACTAGACACGCGGCTTCGGCTGCACTTCAAGCAGACACAGGTGAGCA
TGTGTACCATGCCGTGTACCACCTGTTGTTGTTGGGATGATTGGGTTCCT
TGGATGACCCGCCTAATGCTGGAGACCAGGGACTACTGTACAGAGCAGGT
GCAAGTCCCTGTGTCATGTTGTTGTCTACAGGCCCAACCGTACCGAATAT
ACCAACACCGCAGGTACCGCCGTATCAGGAGCCCAAGGACTACCTCACGG
ACAGCATGTTAGTGCCGTGGATGTGCACGGTAGATATGCCATTCGTCCAG
TGCACAATAAGCGCATGGCTGCGATATCGAGACCCTTCCAATATTTTGCC
ACACCTTGACACCCAAATGACTGCGATGTTCTCGTGCGATGTGCATGACC
CTGTCAACAAGTTGCTATGGTCATCGATAGCATGCCATCCTTTTGGGTCT
ACAGGCGTCCTGACAGATCATTGATTGATCATTTGTAAATGCTAGTGTTG
TGGCATGCCATGGAGTTGCCGCCCTGTATCCCTCCACGCCAGGTGTTGGC
AAGTCAATAGGTAGGTGTGTCTATATTATTCGCATCGACCGCGTACCCGG
TGACCAATGAAAAGACGTTAGTGCCAGCGGGTATATCAAGGTCCCTGGAA
CGGCCAAAATTCGAAAAATGCACGTTGCTCTAAATGCGAATGCCACCATG
AATCTCTCCCCATATCCGCTTACAGAGACACACATCCATAGCTCCACATA
CATGCCTTCGCCCGAATCTAGCAAGCCTAACGCAAAGACAGGAGGACAGC
GAAAAGGAGCACTTCAAGCCCAACCAGGCCAGGATATCGTGGTATGCTAC
TTATCCTCCAAATTTGAAAATCGTACACTCCCAAGATCCAGCAGTCATCA
TGTCAGCAGCTATACTACACTCTACACAGCAGCAGCAGTATAATATAGAC
GAGTCCAACATACAGCAGTAGACGAGTCCAACATACAGCAGTACTGTAGT
AACACATGCACTATCATCATAGCCCCACACATACCCTCGCCCGAACCTAG
AGAGCCACTGATGCAAAGGTAGGTGTGTTCTGGTGTACTTGCGTGCTTGT
GGGAATTGTGGGAAAATCACAGGAGCTGTAGTGAGCCGGCAGGGCTCACA
TCGGGGAGGGGACAGAGAAGTACAGAAGTACAAGAACCAGCTATGGGTCT
ACAAGCCCTCTCCCTGATCATTTTCACTGATCATTTGAATATACTGAAAA
TAGAGTAGTTTGGGCGGCTTGGCGACTGATCTTGTCGAGGATCTTGTCGA
GGTCTACAAGCCTAACCTGCCCTAGCGGCCGCACCGCGACCACGCGTCAA
CCCTTCTATGACCCTGTCTATGCCCACCGTCCTTTCGCGGGCAGCCCTCA
TGGCCTATGGGTGGAGATAGCTGTTGCGTCTACAGAAGTACACTCGTCTC
TTTCTGCTGTACTTCTGTCTCTCTCCCCGCACTCTCTCCTCTTTTTTTTT
TCCCGCAAATAAAAAAGAGCTAGACCCAAAGGGCTGTTGATGTATTTGCT
TTGTACTGCATGCATGCACCTTGTTGTATGACTTTGCAGGGGTTTAGCAT
GCGCTCAAGGGTAAACTTCGGTAAAACTCACATGATGGCCTCGCACCCGG
GGCCGGTGAATCTGAGCACCGCCAAGCTGGTGGAATCAGGAATGACTTAC
GTCGAGGCCAGGAAGAAAATCGCTAGGGCGACAAGGTGACTGAATGGTGT
ATGGGGCTCTCTTTTCTCTGTCTCCGGGTGTGACATGTTCGAGGCGAATG
CCTAACCTTGCTCGTTTACCTCCTGCCCTCGCTCCAAAGGTTGAAGTATT
GACTATGCTCCGATAGTGTATGAAACTCAACCTACAATTTTGACTTACCG
CAAGGACGTTGTATGTGCAAAACGAACAAAAAAATCATTTCTGAAATCTG
GTTCTCCCGCGCCATCACCGCCTAAGTATCTGCATTGCCCCGGACAGTCT
TCTCGAAGAGTTGATTGATGCCCAAAAGGGGATTTAACAGGACGGCGGCA
ACAGCGGCAACAGCCGCAGCGACAACGAAGTAACATTTCCGAAGGTTTTC
ACGGTCGATATATTCGATACGCATGTGTTGGTGCATCACCGTAGGGAAGC
ACACCAACAGTTCGTCCGCGAAGGCGAGCAGCAGCTCGCGAAGGAAATGT
CATTTAGGGACGTGAACGAGAGAGCCAAGAACGCGCACACGCTTGGCACG
GCTACGCTCACTAATAAGATCGAGCGGATGCATAGGCGCGGACGAGAGCG
ACAGGTAAAATCCGTGGATCGCATGTCAATTCTGCGCGTTCGACCTAGCC
ACATCGCCATAAAGAGGGTCCAAGCAAAGAAAGTATAGTGCAAATTCAAC
AAGAACAACAAGGAGAAACAGAGCGCATCCTACTTTGCACGGACGGCTAT
CAAAGGTGCGGCAACCAGATATCTGCAATATTGTCTACAATGTACCAGAC
TAGTAACGCTGCAGCGGTGGACATATTGAATTTGGGTCATCGGCCACCGG
CTGCTCTTGATCGCAGGCAAGGCAAATGCTGGAGTGGAACGAAGAAGCTT
TCCAGGAACGGCAGCAGCAGCAAAGGAAGAAGGAAAAAAGCTCTGCTTAC
CAGCTCCGGAAGAGTTCAAGCAGAGGCAGGACAGTTCCTATAGGGGATAC
CCCCGATCATAGACATCGCACGTTGGCAACTACGGCACAAGAACAAACCC
AGGCCACCCCTTCCTCTTCGCGACAGCTCCTAGCCGATTCCGTCCCGACG
GGCAACTGCCCTTCGGCCAAGCAACCGAAGGGTGATACTCCAGGCGATAG
AAAACCCACCAACCGCCTTATAACCACGGATCTTGAAACGAGGCACACAC
AGCAAACGGTGGATTCCGCAGGGCAGCCGTTGGGAACCCATCAGGAGGAA
GCAGGGGTAGGAATAGATGCCAAGGACAGAGACGGGGCAAGGAGAAAACG
CAAGGGAGGAGATTCCGCGGGCGACTCGAAAGATATAGCGTTTGTGCTAA
GAAAGCTGTATACAGGTGGCGGGCTGGACGCGCAACAGCAGGGGTGGAAG
TGCATGCCCACCAACTTGTTCAACACGCTTACGATGCAGTTGGGAACGCT
GAGCAAGGTTCGTATCGAGCTGAGGTGCTTCTTTTTCCTTTTCCGCGAAC
ATGTATCCGGTTGACCTCCCGCCCCTTTGGGTGCATACTGGGCCATGGTG
AAGTGTCTGCTGCAGATCAACAACCTTCAACTATGAAAAATTTAGTGATG
GTCGAAACGGCGACAGTTTGCCACAGACCAACCGAACCTATATTGTTGCG
ATCGCGTAAATGAATCGCGTGTGACTCTTATCCCCCTCTCCGCCCGTTTG
TGTCGATCAGATCAACATGCCTCGCAACAGCCTTGAGCTCTTGATCTCCC
TGCGGAACCCCAACTTCTCCTGCGCACACATGCGTTCGGTCGGGGAAATC
AATCTCAGCGGGAACAAGCTGAGAGAGCTCCCCGAGGAAGCACAAAGGCT
CACCAGCCTCAAGTGAGACTGCGCCGCAATAATCTGTGTCTAGATTGCAC
ATCAACGCTCAAGGAAACATGTGCCGCGATCTTTTACTGATAGTGCAGTG
GCGGAGCACTCAATGTCACTGAACTCATCGCTTCACCATGTACCTTTCGA
GCCACATGCACACCAGTACGTGTAGATGGATTCAACCGCTTGACAGGTGC
TTCAGCTGCTTTTGTCTCTTGATGTGAATGAGGGTCGTTTGCGAGATGGT
TTGTTGCTTGCTAATTGGGTGGGTGCTATCCGGGGCAAAATACATCGTGA
CACCTAACGGTTAATGGAAGGGTAGCTAGGTTGATGGACATGTTCCGACG
TGTATAGCTTTTATCTGGCTCCTCGTTGTCAAGGGACTGATTCATTCCAT
AAGATCAATTAGAGGACTTGTCAAGTTTATTGATCACCTCTGATGTGCTC
ACCAACTAGCCCATCTGACACCTACCCCAACTCTCCCCCCGTACGCGGCG
CTTACAGCTTCCTGTGACCGAAGGGCCGTCTTTGGATACCCCTCCTTGAA
CCTGTCTGCCGTAGGTCGACGACACGCCCACGTTTAAGAAACCCTCCGTC
TACGGCACCGTTCAATGTTCCGCAACCTGGCCGTGCTATGCCCGTTTGAA
CGATCCGTTTCCTGCAGAACGCTTCGCCTAGACAACAACAAGCTTAGCGG
GTTACCAGACGGGCTGCTGAACCTCACGTCCCTCACGCACCTGAGCCTGC
GACATAATAACTTCTCCAACCTGCCCAACCGCTTCGGCGACCTCCACCGG
CTTGAAAAGCTGGATTTGGGCGAGAACATGCTCAAGACGCTACCACCCAC
CATGGTACACCTGCACAACGAGTGGAATGCCTTAGTCTAGTTGAGGACTG
AGCGGCAATTGTCTGCATGGGCTGGGAGCGAGTTGAATGATGTAGCCATG
CTACATACATAACAGCAACGCTGTTTAACGCGGCCTAACCTTGCACAACT
ACGAGCCCTTTCTTCAGTTGCCGAAACGGTTCCTTATAGGCTTCGTTCGG
TTGGAGGCTATCGACCGCACTTGGGGTTGTCTCGAGTCTGGCTGGGAGAG
CAAAGGATAACACGACGAGTAGGCATCAGCCAGACCGATCTGGCTCACAT
CACCCGAACAACCCAACACGGGAACGCACAAGTTGTACTCTCGTCATGCA
ATCGGTATTTTCCGACGAACACTTCCTGACTGAATGCTAGCTTCCATGAC
TCCAGTTTGAAGCCACAGCGGGTGTACTTTTCGCTGAGGCTTGTTCCTTT
TTATAACTTCGTATTACCGTCGAGCCTTTTTATCTCTCGTGCTAGACATG
CCACCACATGTTGGACCACTTGTTCTCGCTCTGTCTCAAAAGCATCAATT
CGTTATAGCAAATATCAGTCTCACTTGAGCACACATTTCGTAGTAAACAC
GAATGTTCTTCACTTGATTTCGCTTCGCAGGGTATTGGTGAACAATCCGA
TTCTCTGCATCGAAAGTTAATTTCTCCCATTTTTCGACGCTGAAATTCGC
ATGTAGAATCTTCTGACATCGCTAAAGCACCTCAAGCTGGATGGAAACAA
CATGCCTCATTTGGCGGTGCCCCCCCTCCTCAAGACGTCGAACGGGAAGG
ACCAGTGCGCCAGCTGGGTCAAGCGGTGGAACAGGGACAAGAAAAGAGAG
GTACAGTAGGTAGGCGAATGCTATCCCATCTCACGTGATGTTCCTTCACC
ACACCTGTTCGCGCTGCCGTACTCATTGCTGAACTCCTTGATGGACGATT
AACCAACCTGTACGACCACTTCATCTCCGACCTCTTTGAAAGATACTCAT
TGGGGGTTAGCTTGTTGGATTGGTTAAACATTGGCAGAGCAACCGCGATC
TGGAGCCGGCCTCTTCATTTCTTTGTCGCGCACATAGAATCAATCACAAG
GCGTTTGGTTGATTGGACGCTTTGAAAAGGAAACGTATTCGGAGGCTACT
GATGCTGGTCACAACCTCTCGTTGATCTTCCTCCCCTCTATTCCTTCTCT
GCAGTGCCTAGTGCTCTGCCAACCAATGTCAATGCAATTTCTCCTTCTAT
TTCAATATATGTTTCGTTCACTATTCAATCCATGTTTCGACCGGCGAACT
GAATTCCACCTTTTCCCGATTTGGAAAAGTTCCTAAACTTTCCTTGAACG
ACACGTCGTTGGGGTGCTACGGGGTGCTTCCACGTTACGAACTCCATTCG
TCCAGATGTGGGTGAATGATGTTACCGGGGAGACTTCAGACGTGGACCCT
ACTTCCTCGTCGGTGAACCGCAGCAGTAACGCCTCGGCGGCATCTGTCAA
CTCCACCCTCACCGTGGGGACTTTCCCGTACAACCGGAGGAGGAACGAAC
TGGCAGCGAGAGGCAAGAGAAACGAGAAACAAAGGGTTTCGAATTGCAAT
ATCAACGACGGCTGTTTTCCGTTCTCCTTGTCTGCGAATCCCCTCTCAAG
GACTACGCAACCCCAACGAGTTGGCATGCATTGCCAAGCTACCTGAGTCC
CCAAAATATTGGTGTAGTCTGAGGTGGTTATGGTGGGGATAATAGAAGTT
CATGGTGATGGTGGAATGTTTCCGGTTCCAACCGTTATTATTTTTGCTGC
CCCGCCGGAAAACTGTTACTTCTATATTGGGAGTGTTGTGCATGTAAATA
TTCTGCTGTCTTTCGCAAAGTAAACAAGTGGCTCATCTTGTCTACCGTTC
TAAATCATCCATTTTCGTTCTCGACCAAGTTCAGGACTCGTGCAACGTGG
GGTTCTTCAAGAGAGACATGACAGGAACTAAGGTGTTAAACAACATTTTT
CGTCCAATATGTGAGGGTTCTTGTTGAATATGCTGCCCGCATGAAATTCG
ATCCGATCAAAACGTTCCATCAGAACTCCGTTTTTGGTGTGTCCTGGTAT
GTGCAGGCATTTACGAGTGGGAAGCAGCCTTGAATGTAAGCACCGGTAAG
GTGTACTACATCAACAACGTCAACTTCAGCCATGTGAGAAAGCCCGATGG
CCGATCTAGTCTCGTTGGTTGCGTGTAGAATCTATGGACAATCTAAACAT
CTGTAATTTGGTCTGACAACTGTAGGCTCTCAAAGGCTTTTTCGTATGAC
GTACTACATCAACCAAGACATCCTGCACACTATGTTATCTGAGAGAATTC
AGGCGTTCTCATCGTGCGATAGATCTCATGAACGGGGAACACAGTCAACA
ACCGCAGTTGGAGAGTAGCCAATCCCAGTTTCCACCAAGGATTGCCGAGT
CCTATTGGGAGAGAATAACAACAAATTGCGCGGGCAAAGAACGTGGTAAC
TGGTTGAAGCATCTTGACAGTTTCGCAAGGCAGGGGATAGGGGCAGGTTT
GCGCGCGTCCTCGACCTAGATAACGTTTCAGGAACCCAGCCCCCTTTTGG
TCCACGGTGGTTGGCTGGGATATCTAGCCAAACCACGCTACATCATGCAA
TCACGTTTCCTAATGCCATCCCCAATGTTTTGGTATCACTATCAGGTACA
AGCAATGCCTGCATGCATGAACCGCCTTGGGGACATGACGAGGTTGGTCA
GTCTCAAACTCAGCCAGAACAAGCTCCGATCTCTGCCAAGCAGGTGTGTA
ACCGTCTTGAAGATGCCTTCAAGATGATATCTCAAGGATGTCAACGTCTA
ACCTCCCAAAGCTGAGATGATTCTTCTGAGGGCAAGGTGACGCACGCTTG
TGATTGGTGGTCATGATCAGGGATAGCTGGTGTTCGAAATTGGCCGCCTA
GCTTACCCATCGCCTGCCATGGCCGCCAAGCCCCATCCCTCCTTCCCTCA
TGCATGCGTGGTGCTTCCTTAAATTCGGCGTATGCACCGAACAAAACAGC
AGTACTCATACTGTTTTCTTTTCCCCGCCGTTTGCAATAGCATTTGCTGG
TGTCACAACCTTGAGGTGCTGGAAGCAAACGACAACTACTTGGAGAAACT
CCCGGCGAGGCTGGGGGAAATGAAGCAACTCAGGCACCTGAGGCAAGACT
AGTAGGAAAAAGTCACGGTCTCGTACGTCTGAATCGTTGCACGATCGAAT
GCATGCTTTGGTTCTTTCCGAACCATCGATACATTACGAATGTTGTACAC
TGCAATTGAACAATACCCAGATGCGTTAGGAAGGGTTTGGAGACCTTATT
TTGATGAATATACAGGAAGCGTCCGTATAAGAACTGTTCTTTGGACTGGG
TGCCAGTATTGAAGCGTTTCGCAGGCTGCCCTTTTTCACAAGTCAATCAG
TTATTCACCTTGGTCGTTTATTTACAACCAGCAACGATGCGACACACAGC
ATTATCTGCGGGCTGAGCGCCCAAAGTGACTGATGAAGGCGTACCTTACG
GCCAGTCCCTTCCCATGGACGCACGTTGAGGCAGGCGGATGCATACGAAT
CAAGGTTTTGAATTTGCTACCACCCATCGCATTCCCGCCTGTTTGGCAAC
AAAGTGAAGGGTCTGGCACCTAGACCCCTTGCCAAGGGCATCCCCATCCC
CCGCCCCCCATGGTGCTTCGAGTTAGTACCGACCATGCCAGATGCTGTCC
GTAACGGCGTTTCATTGAGGGATATGCATACGACACTCTTCAATTGCGTC
AGTCTCACCCCTTTTGCCTTCTTGCAAATGTTTCTCAACGCCGGAGTACA
ATGGACTTAAAATGCTGTCCAAGACCACCGTCAATGTCTTTTTATCCCTT
GCCCAATGAACTCCCCACCCCGTCCGTCTCTGAACAAACATCTGCCCCTT
TCGTCCCGCTCGTCCTCTGATGCCAAAACGGAAAAACACTGCCATTCTGC
TTCAGGTTGGACGTTAACTGCTTAACTGAGCTTCCTAGCTCTATGGTGCA
GTTGGACCGGTTGGAAGAGCTGTGCCTCACCAGCAACTTCTTCGCTACCT
TCCCGGACTTCGCCATGAAAATGTCGGGCTTGAAGAAGGTACTCTCAAGG
TCATTTCGTACCACAGAGCAAACGTTTCCTCACTTGCAACCGTCAATACA
GAACACGAACGAAGAATTCGATACCCTCCTGCCCGTGTATCGTTTCGCCC
TCGACCTACCCATAATTGAATGCCAATGCTCGGCCGCAGCTTCTTCTCGG
CAACAACCAGCTCAAGAAGCTGCCCTACAGCGTTGGGTTTCTGACCAGTC
TCAAGACGCTGCAGGTGAACAATAACAAACATTCTAATGTTCCAATCTTG
AAACATTTTTTCAGGCATAACGTATTTGCGGAAGCCGAGTTTTTGTTTCT
ACTACGACCTGAACACTTCGTCACATTGGCCGCGTCACTTTCCCGATGCT
CGTATCCGCTTATCCTCGCCATCATTCGTTTGCTACGGCGAACCTTAGCC
TGTGAGTGCCGTCGCCCGGTCCCGTATGTGCATTACATCCGGAGCATAGG
CAGAAGGTCGACATTTGATCCATGCCGAGAGCGAGAATTTCTTCACCCCC
GCTTCCACCCTCCTCCGGCCCGCCTCTCAAAACTAACCTAACCTACACGT
CAACATCCAACCCGGGCCTCACCCTTAACCCTCGCCCAACCGGTCTGCGC
CGCGGCTCAAACGGAAATTGTAGCTGTACAACAACCCTTTGGCCGACCCT
CCGGCGGAGCTACTGCTGTTGGGCATGGGGGCTATGCTGTGGGAATGCCG
GAAAAGGCATTGGATGCAAGTTCGTGGGCCTCCGCCCGTCGTCCGGGTGC
ACGGTTTCGGGATAGAGGCAAGTGGAGGGAATATGTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1370:1860..11397+

>mRNA_E-siliculosus-1a_F_contig1370.2216.1 ID=mRNA_E-siliculosus-1a_F_contig1370.2216.1|Name=mRNA_E-siliculosus-1a_F_contig1370.2216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1370:1860..11397+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCGACAGAGCTGGCCGTCGCAGCAAACAACCAAGCCAGGCGCAGCGCAGT
GAGCGCGGGCACTCCAGTGGCGATGCTCCGGCAAAGTGTTGCTGGCTCCA
TCGATGCCGTCAACGACGAAGACGGCCCGATGGTGGCGAAAATGGCAGAG
GAGGCTGGGGACGGCGAGGTTGTTGAAGGGTCGGCAAGGATTAGAATACA
GCCACTAGACACGCGGCTTCGGCTGCACTTCAAGCAGACACAGTCGACAG
AGCTGGCCGTCGCAGCAAACAACCAAGCCAGGCGCAGCGCAGTGAGCGCG
GGCACTCCAGTGGCGATGCTCCGGCAAAGTGTTGCTGGCTCCATCGATGC
CGTCAACGACGAAGACGGCCCGATGGTGGCGAAAATGGCAGAGGAGGCTG
GGGACGGCGAGGTTGTTGAAGGGTCGGCAAGGATTAGAATACAGCCACTA
GACACGCGGCTTCGGCTGCACTTCAAGCAGACACAGGGGTTTAGCATGCG
CTCAAGGGTAAACTTCGGTAAAACTCACATGATGGCCTCGCACCCGGGGC
CGGTGAATCTGAGCACCGCCAAGCTGGTGGAATCAGGAATGACTTACGTC
GAGGCCAGGAAGAAAATCGCTAGGGCGACAAGGGGTTTAGCATGCGCTCA
AGGGTAAACTTCGGTAAAACTCACATGATGGCCTCGCACCCGGGGCCGGT
GAATCTGAGCACCGCCAAGCTGGTGGAATCAGGAATGACTTACGTCGAGG
CCAGGAAGAAAATCGCTAGGGCGACAAGGGAAGCACACCAACAGTTCGTC
CGCGAAGGCGAGCAGCAGCTCGCGAAGGAAATGTCATTTAGGGACGTGAA
CGAGAGAGCCAAGAACGCGCACACGCTTGGCACGGCTACGCTCACTAATA
AGATCGAGCGGATGCATAGGCGCGGACGAGAGCGACAGGGAAGCACACCA
ACAGTTCGTCCGCGAAGGCGAGCAGCAGCTCGCGAAGGAAATGTCATTTA
GGGACGTGAACGAGAGAGCCAAGAACGCGCACACGCTTGGCACGGCTACG
CTCACTAATAAGATCGAGCGGATGCATAGGCGCGGACGAGAGCGACAGGC
AAGGCAAATGCTGGAGTGGAACGAAGAAGCTTTCCAGGAACGGCAGCAGC
AGCAAAGGAAGAAGGAAAAAAGCTCTGCTTACCAGCTCCGGAAGAGTTCA
AGCAGAGGCAGGACAGTTCCTATAGGGGATACCCCCGATCATAGACATCG
CACGTTGGCAACTACGGCACAAGAACAAACCCAGGCCACCCCTTCCTCTT
CGCGACAGCTCCTAGCCGATTCCGTCCCGACGGGCAACTGCCCTTCGGCC
AAGCAACCGAAGGGTGATACTCCAGGCGATAGAAAACCCACCAACCGCCT
TATAACCACGGATCTTGAAACGAGGCACACACAGCAAACGGTGGATTCCG
CAGGGCAGCCGTTGGGAACCCATCAGGAGGAAGCAGGGGTAGGAATAGAT
GCCAAGGACAGAGACGGGGCAAGGAGAAAACGCAAGGGAGGAGATTCCGC
GGGCGACTCGAAAGATATAGCGTTTGTGCTAAGAAAGCTGTATACAGGTG
GCGGGCTGGACGCGCAACAGCAGGGGTGGAAGTGCATGCCCACCAACTTG
TTCAACACGCTTACGATGCAGTTGGGAACGCTGAGCAAGGCAAGGCAAAT
GCTGGAGTGGAACGAAGAAGCTTTCCAGGAACGGCAGCAGCAGCAAAGGA
AGAAGGAAAAAAGCTCTGCTTACCAGCTCCGGAAGAGTTCAAGCAGAGGC
AGGACAGTTCCTATAGGGGATACCCCCGATCATAGACATCGCACGTTGGC
AACTACGGCACAAGAACAAACCCAGGCCACCCCTTCCTCTTCGCGACAGC
TCCTAGCCGATTCCGTCCCGACGGGCAACTGCCCTTCGGCCAAGCAACCG
AAGGGTGATACTCCAGGCGATAGAAAACCCACCAACCGCCTTATAACCAC
GGATCTTGAAACGAGGCACACACAGCAAACGGTGGATTCCGCAGGGCAGC
CGTTGGGAACCCATCAGGAGGAAGCAGGGGTAGGAATAGATGCCAAGGAC
AGAGACGGGGCAAGGAGAAAACGCAAGGGAGGAGATTCCGCGGGCGACTC
GAAAGATATAGCGTTTGTGCTAAGAAAGCTGTATACAGGTGGCGGGCTGG
ACGCGCAACAGCAGGGGTGGAAGTGCATGCCCACCAACTTGTTCAACACG
CTTACGATGCAGTTGGGAACGCTGAGCAAGATCAACATGCCTCGCAACAG
CCTTGAGCTCTTGATCTCCCTGCGGAACCCCAACTTCTCCTGCGCACACA
TGCGTTCGGTCGGGGAAATCAATCTCAGCGGGAACAAGCTGAGAGAGCTC
CCCGAGGAAGCACAAAGGCTCACCAGCCTCAAATCAACATGCCTCGCAAC
AGCCTTGAGCTCTTGATCTCCCTGCGGAACCCCAACTTCTCCTGCGCACA
CATGCGTTCGGTCGGGGAAATCAATCTCAGCGGGAACAAGCTGAGAGAGC
TCCCCGAGGAAGCACAAAGGCTCACCAGCCTCAAAACGCTTCGCCTAGAC
AACAACAAGCTTAGCGGGTTACCAGACGGGCTGCTGAACCTCACGTCCCT
CACGCACCTGAGCCTGCGACATAATAACTTCTCCAACCTGCCCAACCGCT
TCGGCGACCTCCACCGGCTTGAAAAGCTGGATTTGGGCGAGAACATGCTC
AAGACGCTACCACCCACCATGAACGCTTCGCCTAGACAACAACAAGCTTA
GCGGGTTACCAGACGGGCTGCTGAACCTCACGTCCCTCACGCACCTGAGC
CTGCGACATAATAACTTCTCCAACCTGCCCAACCGCTTCGGCGACCTCCA
CCGGCTTGAAAAGCTGGATTTGGGCGAGAACATGCTCAAGACGCTACCAC
CCACCATGAATCTTCTGACATCGCTAAAGCACCTCAAGCTGGATGGAAAC
AACATGCCTCATTTGGCGGTGCCCCCCCTCCTCAAGACGTCGAACGGGAA
GGACCAGTGCGCCAGCTGGGTCAAGCGGTGGAACAGGGACAAGAAAAGAG
AGAATCTTCTGACATCGCTAAAGCACCTCAAGCTGGATGGAAACAACATG
CCTCATTTGGCGGTGCCCCCCCTCCTCAAGACGTCGAACGGGAAGGACCA
GTGCGCCAGCTGGGTCAAGCGGTGGAACAGGGACAAGAAAAGAGAGATGT
GGGTGAATGATGTTACCGGGGAGACTTCAGACGTGGACCCTACTTCCTCG
TCGGTGAACCGCAGCAGTAACGCCTCGGCGGCATCTGTCAACTCCACCCT
CACCGTGGGGACTTTCCCGTACAACCGGAGGAGGAACGAACTGGCAGCGA
GAGGCAAGAGAAACGAGAAACAAAGGATGTGGGTGAATGATGTTACCGGG
GAGACTTCAGACGTGGACCCTACTTCCTCGTCGGTGAACCGCAGCAGTAA
CGCCTCGGCGGCATCTGTCAACTCCACCCTCACCGTGGGGACTTTCCCGT
ACAACCGGAGGAGGAACGAACTGGCAGCGAGAGGCAAGAGAAACGAGAAA
CAAAGGTGGGAAGCAGCCTTGAATGTAAGCACCGGTAAGGTGTACTACAT
CAACAACGTCAACTTCAGCCATTGGGAAGCAGCCTTGAATGTAAGCACCG
GTAAGGTGTACTACATCAACAACGTCAACTTCAGCCATGTACAAGCAATG
CCTGCATGCATGAACCGCCTTGGGGACATGACGAGGTTGGTCAGTCTCAA
ACTCAGCCAGAACAAGCTCCGATCTCTGCCAAGCAGGTACAAGCAATGCC
TGCATGCATGAACCGCCTTGGGGACATGACGAGGTTGGTCAGTCTCAAAC
TCAGCCAGAACAAGCTCCGATCTCTGCCAAGCAGCATTTGCTGGTGTCAC
AACCTTGAGGTGCTGGAAGCAAACGACAACTACTTGGAGAAACTCCCGGC
GAGGCTGGGGGAAATGAAGCAACTCAGGCACCTGAGCATTTGCTGGTGTC
ACAACCTTGAGGTGCTGGAAGCAAACGACAACTACTTGGAGAAACTCCCG
GCGAGGCTGGGGGAAATGAAGCAACTCAGGCACCTGAGGTTGGACGTTAA
CTGCTTAACTGAGCTTCCTAGCTCTATGGTGCAGTTGGACCGGTTGGAAG
AGCTGTGCCTCACCAGCAACTTCTTCGCTACCTTCCCGGACTTCGCCATG
AAAATGTCGGGCTTGAAGAAGGTTGGACGTTAACTGCTTAACTGAGCTTC
CTAGCTCTATGGTGCAGTTGGACCGGTTGGAAGAGCTGTGCCTCACCAGC
AACTTCTTCGCTACCTTCCCGGACTTCGCCATGAAAATGTCGGGCTTGAA
GAAGCTTCTTCTCGGCAACAACCAGCTCAAGAAGCTGCCCTACAGCGTTG
GGTTTCTGACCAGTCTCAAGACGCTGCAGCTTCTTCTCGGCAACAACCAG
CTCAAGAAGCTGCCCTACAGCGTTGGGTTTCTGACCAGTCTCAAGACGCT
GCAGCTGTACAACAACCCTTTGGCCGACCCTCCGGCGGAGCTACTGCTGT
TGGGCATGGGGGCTATGCTGTGGGAATGCCGGAAAAGGCATTGGATGCAA
GTTCGTGGGCCTCCGCCCGTCGTCCGGGTGCACGGTTTCGGGATAGAGGC
AAGTGGAGGGAATATGTGACTGTACAACAACCCTTTGGCCGACCCTCCGG
CGGAGCTACTGCTGTTGGGCATGGGGGCTATGCTGTGGGAATGCCGGAAA
AGGCATTGGATGCAAGTTCGTGGGCCTCCGCCCGTCGTCCGGGTGCACGG
TTTCGGGATAGAGGCAAGTGGAGGGAATATGTGA