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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI) HSP 1 Score: 342 bits (877), Expect = 2.330e-104 Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 1
Query: 109 MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGRDSR 609
MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMK AIRTLDDTRLGGKYIRVREENSGRDSR
Sbjct: 1 MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVREENSGRDSR 167
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A6P8RXC7_GEOSA (serine/arginine-rich splicing factor 5-like isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8RXC7_GEOSA) HSP 1 Score: 158 bits (400), Expect = 1.320e-39 Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQP-----GRGHRPNGPKFATR-----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGRDSR 609
R++IG LSPH R+RD+++ F YGRI++I+++ GF F+EFED RDA+DAV E++G+E R+ ++ GRG G +F TR RT+HRI VE L S SWQDLKDF R+AG+V Y D R + GVVE+ S DDMK A+ TLD T L G+ I++ E+N R SR
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIKEINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARNRRGRGRFGGGGRFPTRFSYQYRSSGSSRYGPPLRTKHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAH-RSNKNEGVVEFASFDDMKNALDTLDGTELNGRKIKLIEDNKKRRSR 189
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA) HSP 1 Score: 152 bits (383), Expect = 7.450e-39 Identity = 69/140 (49.29%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIR 537
R+Y+G LS +TR+RDL+R F RYGR+E++D++ GFAF+EF D RDA+DAV +M GR+ DG RI V+ +G R G + + + RI VEGLD TSWQDLKDFGR+ G ++Y+DV+ +++G++EY ++D + A++
Sbjct: 6 RVYVGGLSSYTRERDLERVFDRYGRVERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLKDFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A068RLW3_9FUNG (Alternative splicing factor asf n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RLW3_9FUNG) HSP 1 Score: 150 bits (379), Expect = 9.650e-37 Identity = 78/169 (46.15%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 109 MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGP--KFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGRDSR 609
M+ R+YIG L+ RDRDL+R F YG I +I+++ G+ F+EF+D RDAED V + G+EF G RI+V+ RG R + RR+++R+TVE + S TSWQDLKD R+AG+V ++DV R GVVE+ R DM+ A++ LDD+ L G+ +R+ E+ S R R
Sbjct: 1 MSTRVYIGRLARDARDRDLERLFKSYGEIREINIKSGYGFVEFKDPRDAEDVVYDFHGKEFLGERIIVEMARGARRGREDRRRVDRRSDYRLTVENIPSGTSWQDLKDLMRKAGEVTFADVI-RSRPGEGVVEFAHRSDMEYALKKLDDSELNGQRVRLFEDTSRRRGR 168
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A6A4SRR9_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4SRR9_SCOMX) HSP 1 Score: 147 bits (372), Expect = 1.170e-36 Identity = 81/183 (44.26%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRG--------------------HRPNGPKFAT-RRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGR-RWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGR 600
R+Y+G LS H R++D+ R F YG++ +ID++ G+ F+EFED RDA+DAV E++G+E G R+V++ RG +RP K+ RTEHR+ VE L S SWQDLKDF RQAG+V Y+D +GR GV+E+ SR D+K AI LD T + G+ IR+ E+ S R
Sbjct: 3 RVYVGKLSYHVREKDMQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGHGGSHGGRSSGYSSWNRPTRDKYGPPMRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADA--HKGRANEGVIEFRSRSDLKRAIEKLDGTDVNGRKIRLVEDKSRR 183
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A8D3DI69_SCOMX (Serine and arginine rich splicing factor 6b n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3DI69_SCOMX) HSP 1 Score: 147 bits (372), Expect = 2.180e-36 Identity = 81/183 (44.26%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRG--------------------HRPNGPKFAT-RRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGR-RWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGR 600
R+Y+G LS H R++D+ R F YG++ +ID++ G+ F+EFED RDA+DAV E++G+E G R+V++ RG +RP K+ RTEHR+ VE L S SWQDLKDF RQAG+V Y+D +GR GV+E+ SR D+K AI LD T + G+ IR+ E+ S R
Sbjct: 3 RVYVGKLSYHVREKDMQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGHGGSHGGRSSGYSSWNRPTRDKYGPPMRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADA--HKGRANEGVIEFRSRSDLKRAIEKLDGTDVNGRKIRLVEDKSRR 183
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A7N9ASU1_9TELE (Serine/arginine-rich splicing factor 6-like n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7N9ASU1_9TELE) HSP 1 Score: 149 bits (375), Expect = 2.640e-36 Identity = 79/181 (43.65%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATR-------------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGR-RWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGR 600
R+Y+G LS H R++D+ R F YG++ +ID++ G+ F+EFED RDA+DAV E++G+E G R++++ RG R +G + R RTEHR+ VE L S SWQDLKDF RQAG+V Y+D +GR GV+E+ SR DMK A+ LD T + G+ IR+ E+ R
Sbjct: 3 RVYVGKLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVIIEHARGPRRDGYGYGGRSGGYSSWNRSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADA--HKGRANEGVIEFRSRSDMKRALEKLDGTDINGRKIRLVEDKPRR 181
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A6P7IBI1_9TELE (serine/arginine-rich splicing factor 6-like isoform X1 n=3 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IBI1_9TELE) HSP 1 Score: 151 bits (381), Expect = 3.150e-36 Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATR----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGR-RWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGR 600
R+Y+G LS H R++D+ R F YG++ ++D++ G+ F+EFED RDA+DAV E++G+E G R+V++ RG R +G +A R RTEHR+ VE L S SWQDLKDF RQAG+V Y+D +GR GV+E+ SR D+K AI LD T + G+ IR+ E+ R
Sbjct: 3 RVYVGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYGYAGRSSSWNRPGRDKYGPPVRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADA--HKGRANEGVIEFRSRSDLKRAIEKLDGTDINGRKIRLVEDKHRR 178
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: A0A7S0DYD6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYD6_9CRYP) HSP 1 Score: 148 bits (373), Expect = 4.020e-36 Identity = 74/166 (44.58%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVRE--ENSGRDSR 609
R+Y+GHLS R+RDLD F R+G+I I ++ GFAF+E++ DAE AV +MDG +G RI+V+ + GPK + +R+ E L +TSWQDLKDF R+AG+V+++DVF +G R G++EY +RDDM+ A+ LD T L +R+ + E G D R
Sbjct: 13 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLEGMRILVEFAKETPKRGPKGGS---GYRLYAENLSQNTSWQDLKDFARKAGKVIFTDVFSERGERLGIIEYATRDDMEEALYKLDGTELHRSKVRLVKDGERGGGDKR 175
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2198.1 vs. uniprot
Match: T1D6F1_9DIPT (Putative b52 (Fragment) n=1 Tax=Psorophora albipes TaxID=869069 RepID=T1D6F1_9DIPT) HSP 1 Score: 149 bits (376), Expect = 4.170e-36 Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 118 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGH-RPNGPKFATRR------------TEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRLGGKYIRVREENSGR 600
R+Y+G L R+RDL+R F YGRI +I ++ G+ F+EFED RDA+DAV EM+G++ G R+ ++P RG R +G + R T+HR+ VE L S SWQDLKD+ RQAG+V Y+D R + GVVE+ + +MK AI+ LDDT L G+ IR++E+ GR
Sbjct: 5 RVYVGGLPYDVRERDLERFFKGYGRITEILIKKGYGFVEFEDYRDADDAVYEMNGKKLLGERVTIEPARGTARGSGSRRERERRGGRSRYGPPLRTKHRLIVENLSSRISWQDLKDYMRQAGEVTYADAH-RDRKNEGVVEFATSSEMKAAIKQLDDTELNGRRIRLQEDRGGR 177
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Start | 1 |
| Stop | 1 |
| Cds size | 696 |
| Model size | 4679 |
| Exons | 8 |
| Ec32 ortholog | Ec-07_003150.1 |
| Ec32 ortholog description | SR RNA splicing protein |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00001,ko03019,ko03021,ko03041 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | J |
| EggNOG OGs | COG0724@1,KOG0106@2759 |
| EggNOG free text desc. | RNA splicing |
| GOs | GO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000993,GO:0001067,GO:0001069,GO:0001098,GO:0001099,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022411,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031369,GO:0031370,GO:0031503,GO:0031554,GO:0032268,GO:0032269,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032991,GO:0033036,GO:0034243,GO:0034248,GO:0034249,GO:0034613,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042886,GO:0043043,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045184,GO:0045292,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060567,GO:0065007,GO:0070063,GO:0070717,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904594,GO:1990904,GO:2000112,GO:2000113,GO:2000804,GO:2000805,GO:2001141 |
| KEGG Pathway | ko03022,ko03040,ko05168,ko05202,map03022,map03040,map05168,map05202 |
| KEGG ko | ko:K12893,ko:K12896,ko:K14651 |
| Preferred name | NPL3 |
| Seed eggNOG ortholog | 2880.D7FXG5 |
| Seed ortholog evalue | 1.9e-92 |
| Seed ortholog score | 345.5 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1369.2198.1 >prot_E-siliculosus-1a_F_contig1369.2198.1 ID=prot_E-siliculosus-1a_F_contig1369.2198.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=232bp
MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAE DAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTS WQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKTAIRTLDDTRL GGKYIRVREENSGRDSRSRSRSRSRRRSRSYSRSRSPPARRRERSPSPDE RERGRGRARDHSRSRSRSPARHSRSRSRHSR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1369:7615..16991+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1369.2198.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2198.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9377bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:7615..16991+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) GACCTGCCACGCACTGACTGCACCCGCTGACAAACGCTGATACCACCCAG
CCTGCAGCTGACAGAGGGAACGACACAACGAGCAAGCCCTAGCCTCCAAC
CGACGAACATGACGAACAGGATCTACATCGGGCACCTTTCCCCGTGAGTC
TCCGCCTCCGCGGCGTTTTTTTCGGCTGCCGCACAGCGTGGGCGGGGTCT
TCGAATCTCTCTTTGGTCTGATCTCAGGGAGAGTTGTAGGGGGCTGTGGG
AAGGGCGAACGGGTATGAAGCCCCTAGGGACTACACGGCGGCCTGTGTCG
GGGGCGATCGCTAGAGTACGCCCTCGACAGCTTGGATGTTCGATGAAGAC
CGTCAAAATTTGGGCCAATTCTTCACAGGGTGATCCCAGAACGACAGGCA
GTTTACGACCTGCCGTGAGATGCCCATTCTGTGTTTGTAGCAAACTGCGA
GCGACCCCTTTGCGAGCAGTGCCTTTCGCCCACATCAGTAGGGCCGATAT
TCGACTGGTAAACTCATCGTGCACCTCTACCTTGCATGCGGTAGCATACA
CACACGGAACAAGCAACATTTTTGTGTAATCGAAGCGGGGGAATTTCGCT
CCATTCAGGTTTTTTTTTTTTGGCAGAGATCGGCCCTGGGGTATTTATCT
AAGTTGCACGAGATACCACATCCGTTTTGGGCCAATTCAAAAAGCTCGAT
TACTCCACCACGAAGAGGATGACAAAATCAAACGGTACGCTACCGGAATG
TCCTCTGCAAGGCGGTTCCCGCAGCCATTTTCGGGCTCTACGCTACCGGA
ATGTCCTCTGCAAGGCGGTTCCCGCAGCCATTTTCGGGCTCTACTGTCAC
TGCTGTTTATTGCTGCACAAGTCGGGCTCTGAAAATCGGTCCAAATGGTA
TTTTGTGCAATCTACAGCAGTACGGTGGTAACCCCCCGCCTCGCCACCAC
ATCACAGCAGTTTTTAGCATATCTTCCCGTAAAGTAGGTATAATAGAGTT
GTGACATGCGTGTGCTTAGGAATACATCTAACTCCGACTGGCACACTGAA
AAGGGGGACCCTTATTGAGCCGTATACCGCAGGGTACTGTAGTGGACATA
CGACCGCGTTGAAAAACGATTTCGTGCATCTGTTCGCGAGTCTCTTTAGT
ACATTGTATGCATAGTTCTTTACTGCTGTTCCCGGAAACGTGTAGTGATG
TTCTTGCGATGCTGTTCCCGAAGGGGCGGAAGGGTTTAGATCTCTAACCC
TGACCCGGCATATCCAGGGCTCCACGAGACGCAGGGGGGATTCGTGTAGC
AACCACGAACACCAGGCACCAATCCCTTTACACAGCAGCACTGCCGCTCG
ATTCCATTGGCGGCCTATATCCAGGGCTCCCGGAACACACTTCAACGAGA
TACACGACAGGGCAGCCATGAATGAGATGCCCTACAGCGGCAGTAACATG
ACACACAAACCGCTTTATAGTCTTTGTCTTTCCTGGGGCTTACAGATCGG
ATTTGTCGGACTTCGTCCCGTACCTTTTCTGTCAGGCACACGCGGGACAG
GGACCTCGACCGGGCGTTCGGCAGATACGGCAGGATCGAGGTAAGCGCAA
GAATGAAGACATAGCCGTAGAGTGTGGAGAAAGAACGTGGAGAAGGAGAG
AGAGGGAGAAGAGACCCAGGCACGCTAGGAGGTGGAGTCGCGCAAGGCGG
CGCGGCCGCGGTAGGCTCCCCACACTTCCTACAAGGTCACTATTGCTCAC
CTTGGCCGGGTTCGGTCGTGTCTGCGTTTGTCGTGGTTTGGAGCTGCTCT
CTTGAAAGCGCGTATGTAGTCGGGAACAGACGCAAATGGAGGGAAGCATC
CTTCCACATAAAAGCAGAAGATAAACAAGAACACCGCCCGGATAAGGGCG
GAAAGAAAGTGCTACCTCCCTCCCTCCTGCGTGACCCGGGCTGGTGTATA
AAACGTTTACTCACTACCGTACCCGAGAGGTGTAGTGACTGGCTCCCGGA
ATACATGTGGAAGAAAATAATAAACCTGCTTTGGTTCCCCTGTCTTGTTG
CTGGCATCTTGCATGTAATTTAACAACGCCGCTGCTCCTGCTGCTGCTGA
TCGCCCGTCGGCTTTTTTTGCGCCCCCCCCCCCCCCCAATTTCTCGATTT
TCGTTTTTTTTGTGACATTTTCGTCCAGAAAATCGATGTCCGGATGGGGT
TCGCCTTCATCGAGTTTGAGGACCGCCGCGACGCCGAGGACGCTGTTGCC
GGTGAGATAATATTATAGTAACACTGGCTACAAGCACGTCCATTTGTATC
ACTTCATGTTCGGATTTTGCGTTGGACGCGCACACGAAATATGACCTTCC
CCCTGTTAACCCTGGCGACCGGATAACAGAAATAGACGCGTCGATGACAA
GTAGACCCCATCATTTGGTCATGATGCATTTTTGATGCCCGTGGTTGAGG
ACGATCGACGACATCCACGAGGCTGACTAGCTGGCGGCGTAAGGCTCTAT
GATGGTGGACCGATATTTTAGCTGTGACTTTTTTGAGTCAAGCGATACCG
AGCTGTGGCTTTTTGAGTCTAGAGACTCCGACATTATTGTTGCGAACCAG
CAGCAGCCTCAGCAACATTCGGTGCTTCACCCCGCACCGCAGAGCAGGGC
AGCTGTTGCTTTACACCAGCGGCAAACGCTGGAGATGAAGTTTGGGGAGA
GGTGGCGCACGTGAAAAATGGACATGACACCGCCGTACCAAAACGTTTAG
AACAAGGGCGCGACTTTCATACCAACGAGGAGCCGATACGTCCTAGGGTT
TGCCTCCTACGATTGGTATGCTCGTGCTTCTTTCCTTTGCATCGACGGCT
CCAACCAGCCGCGTGTCTAATCTACTGCTGCTGTCTTGTGGGACGCGGAC
GGTGTTGTTGTCCGCAGAAATGGACGGCCGCGAGTTCGACGGTGCGCGCA
TCGTCGTCCAGCCCGGCCGCGGGCACCGCCCCAACGGCCCCAAGTTCGCT
ACCCGCCGCACGGAGCACCGCATCACCGTGGAGGGCCTTGACTCCCACAC
CAGCTGGCAGGATCTCAAGGTGTGTGTTTTGGTTTTGTGTGCATGGGTGG
CTGTAGGTGTTGTGTATCCTCTGTGTACACATGCCTTTGTTCATTTTCTA
CACTACAAATCCATCTCTATTCACCGATAAGAGTCCAAGATAATCTTGTT
TTTGTCGGTTTTGCTTGCTGGGATCGATGTTGCTGTATTTTTTTTGTTTT
CCCCCCGCCGAGTCGTGAGCGGGGACGGACAGGAGCGAGGCCGATTGTTG
TGATTTTCTGTCTTCTGCGGGTGTCCTTGCACATCATGCTCGGTGGGTTC
ATGCGTACAAGAATGCGGCTCTTTGCTCGCGACAAACGCTGCTGCTCTCG
CGACGAGCGCTGCTGTTGCCTGCTTGTGCGCAGGAAGCGTGACTCCCTGT
GTATGTTTGCTGTGGTTATTCCCTTGTACCATTTGCATCGACCGCGCTAA
CCGGCTGACCAATGAAAATAAGTCAGTGGCGTGCGGCCGTGTGTGTCGGA
CCTATTCAGCGCAACAACAACAAAGACATTGATCACGATCTCTGAAACAC
GTTCTCCCCGTCGCTTCGCAAACGATCCCTGCCGACGCGATGTCTCTCAG
GACTTCGGGCGGCAGGCAGGCCAGGTGCTCTACAGCGATGTCTTCTTCCG
ACAAGGCCGCCGCTGGGGTAAGTGGCTTTGACACGAGGACGTACAGCGCA
CACGGGTTTTGTTTTTTGTGAACCGGATTCGTGGGTAGGTAGCTTTTTGC
TGCGTTGGTGAAGGATCGGGACTGCTGCTTCTATATGTGTGCAGCGACAT
TAAAAAGAGGCAGAGTTGTTATCGTGGGTTGTTTCAGTGTCACTCAACAA
CTTTGTTGTTGTTGTCAATATTAATATTTGTGTTGACTGAGAGTCCTGGA
TGGGATCTATCTCGCTAGTTACTGCCGTGAGTTGTCCCAATGTTTTCCGC
CGAGATGAGCCGCGTACCGTACCGTGCCGTGCCGTCCGTAAGTGACGGTT
TGAGGGCGTCGGATGCACTGCAGTAGATAAAATCGTTCGTGAGTGAGCGC
CTCCCAGGGCCGACCCTTGTTTCTGGCAACTTTTCTAGCCGCTGCAGTAA
AAAGGTGACTGATTCGGCGCAGGACGCTGGCGCCTACCTGGTACATACAT
GATAGCACCCCGAGAGCTTTTCATGTGTTTCGTAGATGAATTAACAGCTT
GCCGAGGACCGTCCTAGCTCTGTCGGTTTTTAACCTGTTCTTTTAACACG
CTACAAGGTGCGCGCACAAGCAGCTCTCGATGAGGCGTGAAATGCACACC
GCGCTGCAAGTCGTTGCATTGCGCCCCGTGATCTTATTCGTCCCGTCCCA
TGACCCGTCTGTCCCGTCCCATGACCCATCCGTCCCGTCCCATGATTCAT
CCATCTGCGCCATGATGGCCTGCCTCTCTCAGGGGTCGTTGAGTACGTGT
CACGGGACGACATGAAGACGGCCATCCGCACCCTTGACGACACACGACTC
GGCGGGAAGTACATCCGCGTGAGGGAGGTGAGATCCACCATCTATGCAGT
ACATTGCCGACAGCAAGACGAAGGGAGCGCGTGTTTAGTAGAGACTTCTT
GCTCTAAGAGCAGCAGCGCGGCGGGTTGTGTGCGCGCAGAGACAAGCGTG
CTGGACTGCTTTGCCTGTACGGGGAGGCAGCGTGAGAGGATCCTTCCGTG
TAGTTTTTTTTGTTGTTGAAGAAGGGGAGGGCTTGGTGAGCATGCATGGT
GCCTTGCACCCTAGCATGTAGCTTTCAACCACCTTGGTTGAACCCCAAAG
TTTTGGTTCTCGCATATAACACCCCGTCCTTCAGCCCTGCCGTACTATCT
GCCTCTACAAAACGTGGCTTTTTTTGCCATCACCCATGTACCCTTGCAGG
AACAGATCATAGAATAACACGTTTGTCCTTCTACCCTGCGAAAGGTTTTT
GTCTCCTCCCAAACCTGATTTTTGCCATCACCTCCTTGAATTGCGTGCGT
ATGCCGCGCAGGAGAACAGCGGTCGCGACAGCCGCTCTCGCAGCCGCTCC
CGATCCCGCCGCCGCTCGCGCAGCTACTCCCGCTCCCGCTCCCCGCCCGC
CCGCCGGCGCGAGCGGTCGCCGTCGCCCGATGAACGGGAACGGGGGCGGG
GGCGCGCCCGCGACCACAGCCGCAGCCGTAGCCGTTCTCCCGCCCGCCAC
AGGTGAGAGTGTTTTCGAGTTTCATCCACTCACTCATACCACGACTTTGG
TTGTCGCTTCTTGAGATGCAGGAGCGAGTACTGTACATGGGTAGTGGGCA
AGACGCGAAGTGCGGACGATGCATGTTGATTTTGGAGGACTCATGACCAG
CTAACCCTCCAATCGCGCTCTTTGTGTGCTTCGTCCGGATTCGAATTTCT
CCGTCGGCTTTTCTTGCCGGGCAGCCGCAGCAGGAGCCGTCACTCTCGCT
GAGACGAGTGAGAGAAGAGAGAAGAAGGGAGCGAGGAACGGACAACATGA
GAGCAGACACGAGGAGAGGAGAGGAAGAGGAAGACTCCCTGGAGAGTGTC
GTTTTCGATCGATTGGTCGGGTGCTCTCTTTCTCTTCTTTTTTTGTCGCT
CTTTCTCCCTCCTCCCTTCTCTCCCTCTACGGTGTCCCTCCGTCTTGTCT
TCTTTTCCTGCGTGGTATCTACTGCTGTGTCACAAACGTCTTTCATCAGT
TTTGGATCCGTTTCTGAGCCGCTGGCCTATTTCGGCGAAGGGTCGGTGAC
ACACCACCAGAACCATCAATCGCGGCTCGAATCTTGTGGGAGGGAAGAGA
GGGGAAGAGGAAGCACTTGTTTGTTTGAGGAAGGCCGGCAAGTCGGCTTG
TCCATGACATCCTCCGGACAACCGAGCGGATCGGGCCGGCTCACCTCTGC
CGCACGGGTCCCAACGACTGAGGCCAGGCGCACGACTGGCAGTGCCCGGG
GAAGACGATGGTGGAAAGTTTAGGCTCTAAGGACGGGATGGACGTGTCTG
GATTGCAACGGACGATTGATGACGGCGGGGTGATAAAGCTAAAATGGCGT
AAGTGAAAGTCGTCGGATGTTGTATTCTGCCGCCCGTTGTTTCGACCCCG
GTTGTTGTTCTTTTGTCTCGCAGAGTCCGTCGGGTTGGTCGGTTCAATAA
TTTTCAACGCGGTTAGGTCACATGCGCTCCCTTCAACAAGTGCACCTGTG
TCTTTCTCTAATCTTCGTGTCGTCGCTTTTTTATTTTCGACTCGATTTGT
GTGTGTTCAAAGTATGTGGTTTTTCGGATTTGATTGCCTGGACGGTCTGG
ACTGGTATATATCTGGCTCCAAGTGGCCTGGGTCACCAGGTTCCTCCTGG
TTGCTGAGGAGGGGAAAGTCGAGAGAGGAGGGAGACGTGTGCGATGATCA
AAAGAGCGAAGGGTGCACCGCTGTGGGGCATGCTCGCTCGTGACAGGCCG
GACATTTGTGGTATGAGGAATGAAGGGAGGCTTTTATTGTCTTGCTCCAT
CGCTCCCTCCTGTTTTTTTTTTTTGTTTTAGCCCGCTTCCCTTGTCCCCG
CGGTGTGTAATAAATAGGGAACAGTTTCATTTGTTCAAGGGCAGTATCAT
AGGTGCTGCATGGTAAACATACATATGTTGCACGCTCGGGAAGATAGCGT
TTAGTTTGTTGAGAGAAGCGCGAGCCCGATGCCGTAAGATGTTGGATGCA
CGTTGTTGTAGTACAACTGAGGAACGATGGAGCGTTGCTGAACGACGCCA
ACACGTCACTTGTTGGTGGCGAGCATATCATGTGCACCGATGCCTACCCG
ACCAACAAAGCGTTCGGACCTCTTGGCACATGTATGGCGGCTGCAGAGCC
AGCGACGCGACCTCGCGCTCGTACTCGAAAGACAAGCGCGTTAGTAATCT
AAGAAGGGTGTCCCTGTGATTTCGGTGGCGTGCGCCGGGATGGAATGTTG
CATCATCCATCCACCCGCTGTCCCTGACTATCACTCATCATGCGATACGG
GTTCATGAGGCGGAGAACTGTTACAACAGGTGTTCCAGATCGGGTCTGGT
CTGGTCTGGTCTGGTCTGGTGTGTAGTTCTCTGTGGTTCTGGACGTCCTT
CGCGAGGGCGATCATGGTGGCGGTAATATGCCACATTTTGTCAACGGTAC
ATGCCATGGACCCTGGGCTCGACGAGTCCCACCAATCTGGACTGAGATCT
GTGGTCTGTGGTCTGTGGTCTGGTTCCATATGGAAATTTCGGGTTCTGGT
CTCTGATGAACTGACGAGAGCGAAACTGGGAAACTGGACTGGATATATAC
CGGGTTGCTGGGCTGAGGGAAACAGGCGGTACGGGCATGTGATGCGCATG
GGTTTATCTTTTAAGTAGTAGAGTTTATCAAATTTCCGATGCAACCTTCT
GTTTAGTCCAATCCTTCATCGCTTTCAAGTCGTGAGCTTAGCAGCAGCTT
TAAAGCGGCACCGGAGCTGTGGTACCACTCACCGCTCGCCCGTAGGTGCC
GCTGCCAACCGTTCCTCTGCCGATGGGTGGGCGGGTTAAGGTCTCAGCTC
ACCCCGTACCTTCATTGTGATGCCCGCGACGCACTTGCCTCCTTGTCACG
CTGCTGCTGAATTTGCCGGCCTTATCCTGCCGTAGAGGCATGCATAGATA
AGCTGGTAAATATATGTGCAACACACTGCTGTTGTTGTGCGTGCAACTTT
TCCCGTCCATCTGACGTGTCCGCAGGAGCCACCCGCCCGCCGTCTGGATC
TATCCAGCCGGGTTAATGTGTCTTTTGATGCGAGCGTCGATCGATGGCAT
GTACATTTTTTCACTTATTTTCAGAAAAAAAACGGCGATCGACAACACGT
GTTTGTGATCTTCGCCGCCGCGCAGTCCCCGTCCGCTTCGCGCTGCGCTC
TTTCTGATGCCCCTCCCGGTGGCTCCCGATTGATTCAGTCAGATCCCTCG
TACATAGGACACAGACGGGCAGTCCGCCACAAAACGTGCTAGTGTGGCTG
CCTTGGGGTCAGTGGCCTCCTCCGTCCAATCAATCGGGACTCAATTGAAG
CCGATTGACTACCTGAAAGCGCGTCGAACCGGCCGCCGATCATTGCGTAC
ACTGCTGTGCTTGATATGAAAACCAAGTACTTGAAGGACGGTAAGGTCGA
CTGGCGGCCTGGCCCACTGGCGATGAAATGGCTGCCCACCAACTCCCCCG
CCCGCTGGGATGAAGCCCGACGCTCGATTGGTGAACACCGCGGATGGCTC
CGAGGGAGATCGTGGGGTCAACAGAGACTGACGCACACCAAACTTCGGGC
TTGTGACACCCGTTTGGTTGAACGAGGAGAAATTGGAGCGCCTAACCCTA
CCAATTCCTATCATCATCCCGCGAATGGTGTCCCCGAATATCCTGCGGCA
CACGCCAATCGGGTTTCACGGTTCTCCTTGAGATGATGGCGTGACTGAAC
GTGCGCGTATCGCTTCAGACAATTAGACGCATGTATCCGCCCCTGCCAAA
CATGGCCTCGGAGAGTATGAACAGATCGGATGATGACTGATTTCCTCCTC
CTTCTGATGTGCAGTTCTGTAGTACGGAAACACAAAAGCGGTGCGGATAC
AGAGCTATATTCTCAGCACACGTACTGATCGGCTAACTTATTTACAGTAG
GAAAGGGGTGTGTTCTGGGCATTATTTCTTGCAGATTGTCGGGGGGCGGG
AAAGAGGAGTGAAACTCCGTTTGAATGGGATGCACGCATCATTTCTATTT
CCTTGAATCGCAGCGGAGGGGTAGAAACGAAATTGCTTTCTATGTAGACA
GGACTCTGGTGTGGGCTTGGGTGGAGTATCCGGAGATGATGATGGTACCC
CTTTGCTTTTCCCGGCCGGGGGGGCTCTCGATATTCCCAAACAAATGCAG
TTCTTCTCATTTCCACCCTCTCAAAGGGGCTTGGTCGATCAGCCTCCCCC
CTCACGCCTGGGAGGCTGCGCCTGGGGATCAGCTGAGGGCATAGACTAGA
CTATAGCTCTTCGGTCCATATTTCTTGGATTCACAGGTAGACTGGGCAGC
TGTTAGCTGCTGTCTTTGTTGGCCTAAACTCTTGTTCGAATGGCAGAGTG
TTAGCTGCTGTCTTTGTTGCCTAAACTCTTGTTCGAATGGCAGAGAAAAA
AATAAGATAATACCGGCGGTAGACAGGCCAGCTTCGGTTTCAAATGTGTC
GCAATCTTGAACAGGCGCAGTGTGTGATAGTACGGGATACGAGAGTGCCT
CACCTACTTGCTGCGGAACTTTGCGCGCGTAATCATGCTCTTAGACTATC
GACTTCAAGCAACGCCTCCACATGAAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1369:7615..16991+ >mRNA_E-siliculosus-1a_F_contig1369.2198.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2198.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1392bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:7615..16991+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGACGAACAGGATCTACATCGGGCACCTTTCCCCATGACGAACAGGATC TACATCGGGCACCTTTCCCCGCACACGCGGGACAGGGACCTCGACCGGGC GTTCGGCAGATACGGCAGGATCGAGGCACACGCGGGACAGGGACCTCGAC CGGGCGTTCGGCAGATACGGCAGGATCGAGAAAATCGATGTCCGGATGGG GTTCGCCTTCATCGAGTTTGAGGACCGCCGCGACGCCGAGGACGCTGTTG CCGAAAATCGATGTCCGGATGGGGTTCGCCTTCATCGAGTTTGAGGACCG CCGCGACGCCGAGGACGCTGTTGCCGAAATGGACGGCCGCGAGTTCGACG GTGCGCGCATCGTCGTCCAGCCCGGCCGCGGGCACCGCCCCAACGGCCCC AAGTTCGCTACCCGCCGCACGGAGCACCGCATCACCGTGGAGGGCCTTGA CTCCCACACCAGCTGGCAGGATCTCAAGAAATGGACGGCCGCGAGTTCGA CGGTGCGCGCATCGTCGTCCAGCCCGGCCGCGGGCACCGCCCCAACGGCC CCAAGTTCGCTACCCGCCGCACGGAGCACCGCATCACCGTGGAGGGCCTT GACTCCCACACCAGCTGGCAGGATCTCAAGGACTTCGGGCGGCAGGCAGG CCAGGTGCTCTACAGCGATGTCTTCTTCCGACAAGGCCGCCGCTGGGGAC TTCGGGCGGCAGGCAGGCCAGGTGCTCTACAGCGATGTCTTCTTCCGACA AGGCCGCCGCTGGGGGGTCGTTGAGTACGTGTCACGGGACGACATGAAGA CGGCCATCCGCACCCTTGACGACACACGACTCGGCGGGAAGTACATCCGC GTGAGGGAGGGGTCGTTGAGTACGTGTCACGGGACGACATGAAGACGGCC ATCCGCACCCTTGACGACACACGACTCGGCGGGAAGTACATCCGCGTGAG GGAGGAGAACAGCGGTCGCGACAGCCGCTCTCGCAGCCGCTCCCGATCCC GCCGCCGCTCGCGCAGCTACTCCCGCTCCCGCTCCCCGCCCGCCCGCCGG CGCGAGCGGTCGCCGTCGCCCGATGAACGGGAACGGGGGCGGGGGCGCGC CCGCGACCACAGCCGCAGCCGTAGCCGTTCTCCCGCCCGCCACAGGAGAA CAGCGGTCGCGACAGCCGCTCTCGCAGCCGCTCCCGATCCCGCCGCCGCT CGCGCAGCTACTCCCGCTCCCGCTCCCCGCCCGCCCGCCGGCGCGAGCGG TCGCCGTCGCCCGATGAACGGGAACGGGGGCGGGGGCGCGCCCGCGACCA CAGCCGCAGCCGTAGCCGTTCTCCCGCCCGCCACAGCCGCAGCAGGAGCC GTCACTCTCGCTGACCGCAGCAGGAGCCGTCACTCTCGCTGA back to top
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