mRNA_E-siliculosus-1a_F_contig1113.765.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1113.765.1
Unique NamemRNA_E-siliculosus-1a_F_contig1113.765.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: D8LT94_ECTSI (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT94_ECTSI)

HSP 1 Score: 583 bits (1503), Expect = 1.180e-205
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 3
Query:  129 MTSLSQEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF 1028
            MTSLSQEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLS+YVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF
Sbjct:    1 MTSLSQEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSSYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A7R9U7U3_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7U3_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.940e-83
Identity = 139/276 (50.36%), Postives = 189/276 (68.48%), Query Frame = 3
Query:  195 DSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAA-SRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSD 1019
            D +D GV+ E+L   FG+EY  L DV+N++L   R+ + +  +DT+ YKLV  EKA KL GLT EQ +IYQ I+KAGNKGIWTR I T TNV Q  +TKTLK LE R L+K+ KSVTS+ KKLYML+E  PA EITGG WY++ EFD+EFV  +S +V +Y+K+ E+  L+DIA A++ +G SK+DLS ++V+ IV +L++DG +E V+    ++   D  +GP+Y+  P +      TE PCG C V   C E GV+SP TCVY+  WL L + D
Sbjct:   30 DENDGGVSDELLQHEFGKEYGKLADVLNTMLEQRRVTILRAHDDTLVYKLVSAEKASKLQGLTREQELIYQEIKKAGNKGIWTRKITTETNVQQQVLTKTLKLLEQRQLIKSVKSVTSRRKKLYMLFEEVPATEITGGAWYSEGEFDHEFVSSMSQFVYTYIKQGESASLQDIAKAVRETGFSKVDLSTDDVQQIVESLIFDGRVERVQNPILTQMGLD--NGPLYRSKPKITTPQFVTENPCGICPVANQCCEGGVISPATCVYMNHWLELDSLD 303          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A2D4BDY6_PYTIN (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDY6_PYTIN)

HSP 1 Score: 235 bits (600), Expect = 1.340e-69
Identity = 129/288 (44.79%), Postives = 183/288 (63.54%), Query Frame = 3
Query:  144 QEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNL 1007
            QE+ A +H  L  + S    D   ++EV     G EY  L  VIN+L+ + R++  +     + Y +V  E+A+++ GLT EQ ++ Q IE+AGNKG+WTRDIKT TN+ Q  +TKTL+ LE R LVK+ KS++SK+KKLYML++L P+ EITGGPWY +QEFD+ F+  LST+V   +K      LK I   +  SGISK+ L  +E++ I+ TL+YDG +EEVR  A R    A     YK++  +   NA +E PCG C V   C E  V+SP++C+YL +WL+L
Sbjct:    9 QEQQALMHKFLSLLRSYP--DPLTDAEVREAFAGGEYERLPTVINALMGEGRIKXFQ-RGSVLSYGVVGAEEAERIKGLTIEQRLVLQEIERAGNKGVWTRDIKTHTNIPQQIVTKTLRVLESRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLKAITDKVHASGISKVALGPDEIRSIIQTLMYDGRVEEVR--AVRLTPGANHETKYKISQEISTFNALSETPCGVCPVFDQCQEGNVISPRSCLYLTKWLDL 291          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A067BY85_SAPPC (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BY85_SAPPC)

HSP 1 Score: 231 bits (589), Expect = 3.880e-68
Identity = 120/280 (42.86%), Postives = 189/280 (67.50%), Query Frame = 3
Query:  198 SSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQ-LSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGA--ASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF 1028
            SS + +  +V+ +SFG++Y  L   IN L+ ++R++ L +G N  + Y+LV +E+++++ GL+ E   +   IEK+GNKG+WTRDIK  TN+ + T+ K +++LE RHLVK  KS++ K+KKLYMLY+L P+++ITGGPWY +QEFD++F+  LST+V  +++ +    L+ I   +  SGI+K+ L  +E+  IV+TL+YD  +EEVR A  A+   RD      YK+   V V +  +E PCG C V + C++  +VSP TCVYL +W+N+  +D+LF
Sbjct:   13 SSTEPIGDDVVRKSFGDQYAKLPVCINRLMGESRIKILMQGSN--VLYQLVTKEESERMQGLSGEHRAVLHEIEKSGNKGVWTRDIKMQTNLPEMTIRKIIRTLESRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSTFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPDEMMSIVNTLIYDERIEEVRTARLANGEMRDVS----YKICRDVSVFDGLSEAPCGVCPVFEQCADGNIVSPATCVYLTKWMNV--ADDLF 284          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A0W8DBA8_PHYNI (DNA-directed RNA polymerase III subunit RPC6 n=24 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DBA8_PHYNI)

HSP 1 Score: 230 bits (587), Expect = 9.510e-68
Identity = 118/259 (45.56%), Postives = 168/259 (64.86%), Query Frame = 3
Query:  243 GEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSD 1019
            G  Y  L DVIN+LL + ++++ K +   + Y +V  E+A+++ GLT EQ ++ Q IE+AGNKGIWTRDIK+ TN+ Q  +TKTL+ LE R LVK+ KS++SK+KKLYML++L P+ EITGGPWY +QEFD+ F+  LST+V   +K      L  I   +  SGISK+ L  EE++ I+ TL+YDG +EEVR A+            YK++  +   N  +E PCG C V   C E  V+SP++C+Y+ +WL L   D
Sbjct:   41 GGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSASHEVK--------YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKELD 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A1Y1IK16_KLENI (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK16_KLENI)

HSP 1 Score: 227 bits (578), Expect = 1.960e-66
Identity = 123/271 (45.39%), Postives = 180/271 (66.42%), Query Frame = 3
Query:  201 SDDGVNSEVLSESFGEEYPL--LVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDA-GDGPVYKMAP-AVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWL 1001
            SD GV  ++L +    + PL  L   +N LL  ++LQ+   +  T++YK V +E   +  GL  E+M++YQ+I+ + N GIWTRD+K  +N+ Q  +TK +K+LEGR L+K  KSV SK++K+YMLYE+ P++EITGG WYT+QEFD EF+  L   V  +V+ Q    L++IAA +K SG +K+DL +E+ + + +TLVYDG +EE+    S F+ D   D   Y+M+P +V   NAFT +PCG C V+  CS+DG++SP TCVY  EWL
Sbjct:   24 SDGGVTQKMLQDEL-PDIPLEELGSALNVLLSRHQLQMYT-QASTLYYKPVNQEDRVRFRGLGSEEMLVYQIIQASQNMGIWTRDLKLRSNLQQPQITKIIKTLEGRRLIKAVKSVASKNRKVYMLYEIEPSREITGGAWYTEQEFDAEFIGVLREAVKKFVENQGKVTLEEIAAFVKSSGATKVDLRLEDYQQVANTLVYDGEVEEI----SEFDPDEDADTTFYRMSPMSVPETNAFTSIPCGVCPVLHECSDDGLISPATCVYYQEWL 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A1V9ZF30_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF30_9STRA)

HSP 1 Score: 225 bits (574), Expect = 8.600e-66
Identity = 122/289 (42.21%), Postives = 187/289 (64.71%), Query Frame = 3
Query:  198 SSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLT----------PEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGA--ASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF 1028
            SS + V+  V+ +SFGE+Y  L   IN L+ ++R+++   +  T+ Y+LV +E+A+++ GL+           E   +   IEKAGNKG+WTRDIK+ TN+ + T+ K ++ LE RHLVK  KS++ K+KKLYMLY+L P+++ITGGPWY +QEFD++F+  LS +V  +++ +    L+ I   +  SGI+K+ L  EE+  IV+TL+YD  +EEVR A  A+   R+      YK+   V V +A +E PCG C V   C++  +VSP TCVYL +W+N+  +D+LF
Sbjct:   13 SSTEPVSDNVIKKSFGEQYAKLPSCINRLVNESRVKILM-QGTTLMYQLVPKEEAERMQGLSYVAVNSNYHWGEHRAVLHEIEKAGNKGVWTRDIKSQTNLAEVTIRKIIRVLETRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSNFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPEEMMSIVNTLIYDERIEEVRTARLANGEMREVS----YKICRDVSVFDALSEAPCGICPVFDQCADGNIVSPATCVYLTKWMNV--ADDLF 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: K3X6G1_GLOUD (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6G1_GLOUD)

HSP 1 Score: 224 bits (570), Expect = 3.240e-65
Identity = 113/253 (44.66%), Postives = 166/253 (65.61%), Query Frame = 3
Query:  249 EYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNL 1007
            EY  L  V+N L+ + ++++ +  N  + Y ++  E+A+++ GLT EQ ++ Q IE+AGNKGIWTRDIKT TN+ Q  +TKTL+ LE R LVK+ KS++SK+KKLYML++L P+ EITGGPWY +QEFD+ F+  LST+V   +K   T  L  I   +  SGISK+ L  EE++ I+ TL+YDG +EEVR    R          YK++  +   N  +E PCG C V   C E  ++SP++C+Y+++W+ L
Sbjct:   39 EYEKLPSVLNVLMSEGKIKIFQKGN-VLSYGVIGAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKTHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGTSTLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRTV--RLTPGVSHETKYKVSHDISTFNYLSETPCGVCPVFNQCQEGNIISPRSCLYISKWVEL 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A024U424_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U424_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.350e-65
Identity = 115/272 (42.28%), Postives = 177/272 (65.07%), Query Frame = 3
Query:  198 SSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGA--ASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNL 1007
            SS D ++   + +SF  EY  L  VIN L+ D R+++ + +N  + Y LV +E+A+++ GLT EQ  +   IEKAGNKGIWTRDIK  TN+ +  + KT++ LE RHLVK  KS++ K+KKLYML++L P+++ITGGPWY +QEFD++F+  L  +V  +++ +    LK I   +  SGI+K+ L  +E+  I++TL+YD  +EEVR A  AS   R+      YK++  V   +  ++ PCG C V   C++  ++SP TC+YL +WL++
Sbjct:   13 SSTDAISDAQVRDSFRAEYDKLPGVINELVTDGRIKIFQ-QNGNLMYGLVAKEEAERMRGLTVEQRGVLHEIEKAGNKGIWTRDIKAKTNIPEVIIRKTIRLLETRHLVKAVKSISQKNKKLYMLFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIRAKGIVTLKQITDKVHESGIAKVSLGPDEMMSILNTLIYDDRVEEVRAARLASGEWREVS----YKVSREVTDFDTLSDTPCGVCPVFDQCADGNIISPATCIYLTKWLDI 279          
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Match: A0A4D9CUF8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.910e-65
Identity = 118/270 (43.70%), Postives = 178/270 (65.93%), Query Frame = 3
Query:  207 DGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPP-LKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPN 1013
            +G+ +E L E F E Y  LV +INS L +N ++  K E++ + Y+ V    A+K+  L  EQ+++YQV+EKAGNKGIW +DI++ T++ Q  + K LK+LE R LVK+  S++SK++KLY+LY+L PAKEITGGPWYT+ EFD+EF++ LS  +  ++K+Q  PP L  I   ++ SG+SK++L+  EV+LI+++L YD  +E V+ +       +   P YK++  V  +N FT+ PCG C V   C E G +SP  C Y   WL++ N
Sbjct:  375 EGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYLFIKQQRKPPSLGIIVDYVRNSGVSKVELAPGEVQLIINSLAYDMKIEPVQNSLVGALPSSDGTPCYKISRQVTPLNHFTDFPCGRCPVQAQCEEGGEISPANCRYFNVWLDVNN 644          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1113.765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT94_ECTSI1.180e-20599.67DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A7R9U7U3_9STRA1.940e-8350.36DNA-directed RNA polymerase III subunit RPC6 n=1 T... [more]
A0A2D4BDY6_PYTIN1.340e-6944.79DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A067BY85_SAPPC3.880e-6842.86DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A0W8DBA8_PHYNI9.510e-6845.56DNA-directed RNA polymerase III subunit RPC6 n=24 ... [more]
A0A1Y1IK16_KLENI1.960e-6645.39DNA-directed RNA polymerase III subunit RPC6 n=1 T... [more]
A0A1V9ZF30_9STRA8.600e-6642.21DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
K3X6G1_GLOUD3.240e-6544.66DNA-directed RNA polymerase III subunit RPC6 n=2 T... [more]
A0A024U424_9STRA3.350e-6542.28DNA-directed RNA polymerase III subunit RPC6 n=8 T... [more]
A0A4D9CUF8_9STRA6.910e-6543.70Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1113contigE-siliculosus-1a_F_contig1113:23708..30355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size903
Model size1715
Exons8
Ec32 orthologEc-12_005690.1
Ec32 ortholog descriptionRNA polymerase Rpc34
Hectar predicted targeting categoryother localisation
BRITEbr01611,ko00000,ko00001,ko00002,ko03021
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.K
EggNOG OGsCOG5111@1,KOG3233@2759
EggNOG free text desc.transcription by RNA polymerase III
GOsGO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
KEGG ModuleM00181
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG ReactionR00435,R00441,R00442,R00443
KEGG koko:K03025
KEGG rclassRC02795
Preferred namePOLR3F
Seed eggNOG ortholog2880.D8LT94
Seed ortholog evalue2.9e-165
Seed ortholog score587.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1113.765.1prot_E-siliculosus-1a_F_contig1113.765.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1113 23836..29671 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927618.9331603-UTR-E-siliculosus-1a_F_contig1113:23707..238351622927618.9331603-UTR-E-siliculosus-1a_F_contig1113:23707..23835Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1113 23708..23835 +
1696318612.608787-UTR-E-siliculosus-1a_F_contig1113:23707..238351696318612.608787-UTR-E-siliculosus-1a_F_contig1113:23707..23835Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1113 23708..23835 +
1622927619.0568247-UTR-E-siliculosus-1a_F_contig1113:29671..303551622927619.0568247-UTR-E-siliculosus-1a_F_contig1113:29671..30355Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1113 29672..30355 +
1696318612.6973767-UTR-E-siliculosus-1a_F_contig1113:29671..303551696318612.6973767-UTR-E-siliculosus-1a_F_contig1113:29671..30355Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1113 29672..30355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927618.947883-CDS-E-siliculosus-1a_F_contig1113:23835..239101622927618.947883-CDS-E-siliculosus-1a_F_contig1113:23835..23910Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 23836..23910 +
1696318612.6210482-CDS-E-siliculosus-1a_F_contig1113:23835..239101696318612.6210482-CDS-E-siliculosus-1a_F_contig1113:23835..23910Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 23836..23910 +
1622927618.9663122-CDS-E-siliculosus-1a_F_contig1113:24610..247001622927618.9663122-CDS-E-siliculosus-1a_F_contig1113:24610..24700Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 24611..24700 +
1696318612.6281505-CDS-E-siliculosus-1a_F_contig1113:24610..247001696318612.6281505-CDS-E-siliculosus-1a_F_contig1113:24610..24700Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 24611..24700 +
1622927618.9776778-CDS-E-siliculosus-1a_F_contig1113:25995..260841622927618.9776778-CDS-E-siliculosus-1a_F_contig1113:25995..26084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 25996..26084 +
1696318612.635915-CDS-E-siliculosus-1a_F_contig1113:25995..260841696318612.635915-CDS-E-siliculosus-1a_F_contig1113:25995..26084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 25996..26084 +
1622927618.9907696-CDS-E-siliculosus-1a_F_contig1113:26487..266871622927618.9907696-CDS-E-siliculosus-1a_F_contig1113:26487..26687Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 26488..26687 +
1696318612.650308-CDS-E-siliculosus-1a_F_contig1113:26487..266871696318612.650308-CDS-E-siliculosus-1a_F_contig1113:26487..26687Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 26488..26687 +
1622927619.0046303-CDS-E-siliculosus-1a_F_contig1113:27584..276911622927619.0046303-CDS-E-siliculosus-1a_F_contig1113:27584..27691Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 27585..27691 +
1696318612.6596794-CDS-E-siliculosus-1a_F_contig1113:27584..276911696318612.6596794-CDS-E-siliculosus-1a_F_contig1113:27584..27691Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 27585..27691 +
1622927619.015647-CDS-E-siliculosus-1a_F_contig1113:28456..286151622927619.015647-CDS-E-siliculosus-1a_F_contig1113:28456..28615Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 28457..28615 +
1696318612.6686556-CDS-E-siliculosus-1a_F_contig1113:28456..286151696318612.6686556-CDS-E-siliculosus-1a_F_contig1113:28456..28615Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 28457..28615 +
1622927619.0297585-CDS-E-siliculosus-1a_F_contig1113:29005..290891622927619.0297585-CDS-E-siliculosus-1a_F_contig1113:29005..29089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 29006..29089 +
1696318612.6794028-CDS-E-siliculosus-1a_F_contig1113:29005..290891696318612.6794028-CDS-E-siliculosus-1a_F_contig1113:29005..29089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 29006..29089 +
1622927619.04406-CDS-E-siliculosus-1a_F_contig1113:29572..296711622927619.04406-CDS-E-siliculosus-1a_F_contig1113:29572..29671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 29573..29671 +
1696318612.6886077-CDS-E-siliculosus-1a_F_contig1113:29572..296711696318612.6886077-CDS-E-siliculosus-1a_F_contig1113:29572..29671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1113 29573..29671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1113.765.1

>prot_E-siliculosus-1a_F_contig1113.765.1 ID=prot_E-siliculosus-1a_F_contig1113.765.1|Name=mRNA_E-siliculosus-1a_F_contig1113.765.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=301bp
MTSLSQEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVIN
SLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGN
KGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYE
LTPAKEITGGPWYTDQEFDYEFVKHLSTYVLSYVKEQETPPLKDIAAAIK
VSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMA
PAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF
*
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mRNA from alignment at E-siliculosus-1a_F_contig1113:23708..30355+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1113.765.1 ID=mRNA_E-siliculosus-1a_F_contig1113.765.1|Name=mRNA_E-siliculosus-1a_F_contig1113.765.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6648bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1113:23708..30355+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAGAGAGGAGAGGCAAGGAGAGAAAGAGCGAACGGAGAGCGCCCAAGTA AAGCAACAGGAAGGCTAAGCCAGCCGGCTAGTCTCTCCCTCCTCTCTCCT CTCTCTTTGCAGTCGGCCGAACACGAAGATGACCAGCCTCAGCCAGGAAA AATTTGCCAGCCTTCATGGCCGCCTCATGACCATCCTGTCCGCGGACTCG AGCGTGAGTTCACTGCTGTGCTGCTGTGTAAGCCGAGGCCATCGGTATGG ATATCGAAACAACCAAAACAATGCACACCATACATGCTCGTTGCGGTATG AGCAATCTCACCCGCCAAGGGCAAAGAAAAAGCTGAAGCTAATCAATCAA CCTCGGGTCGGGTAACCGACGGAACTCGCGGTACGGGGATGTAGACGATG TGTGCGTAGGTGCCGCTTTCCTCGTGGTGGAGACTGCTGTAGGAACCTGC CTCCTCGTCCTACCTGGTCAATACATATCCAGGACGATAGACCAATCTAT GCACTACAAAGACTACAAAGCAGGCAGGCTGTTCGTGAGGACTAAAAAGC CTTGTATGTACTTTACATACGTTTCAGACATTGCTGCCCGCTGCTGTTGT CCCGCTGTGTATAATACCCAAAAGCAAGACATCTTCGTAGATTGCATAGC ATTATGTTGCATCGTCTGTTTCCCTCCAGTTTTCCCGCCTACTCCTTGAT TCGCTCGTGCGTGCGCTGTGCCATCCGCGTATGCGGTGTGTGGGTTACGT AACTGTAATGTTACGCTCCAAATACTCCAAATAGCCCCTTGAACAAAGTG TCCCGACACTCTTTTCTCTCGCTCTCTGCCTCGTTCCAACTGCGTCTCTC TCTGCCCCCCTCGCTTACACGATGACGATGTTCGTGGTGAATGATGGGGA CAGGACGATGGGGTCAACAGCGAGGTTTTGTCGGAGAGCTTCGGCGAGGA GTACCCCCTGCTGGTGGACGTCATCAACTCCCTCCTCGTCGATGTGGGTC TCGTATTCCCCATGATTTTCAACAAATCGCGTCTTTTTGTCCTTTGCCCG TTCCCATGATTTTCAACCAATCGTGTCTTTTTGTCCTTTAACCTTTGCTG TGCCACGCACAGCTCCCCTCTCCTCAAGGCCTCCAGGTACATGCTTCGCG TTCAGATCGTAACGGGCGCGAGGGGCCGCACCCATCATTTGTTCGCGCTA GGTGTGCACACAGGCATCACGGCACCTCAACCTCCCCCCCCCCCCATGTG TGGTCTGAGGATTTGCATGCAGCCCTACCGGGATCCCAGAACCCCTCTTG ACTACGCCTTGACCCGCTTGTCCCTACAGAGCCGCACCGGTGTCGCGTGG CCATGACCGCCTTCGCGCGATTCATAAGTTTATTATGCGGAAATAGTACA GGACGGGGGGGGACGCAGACCCTATTTATTCCCTATCCCCAACCCAACTT CCCCGATTGTATGTTTAATCCAACATGTTTGCATAATACGAGAAATCCTG CGAGGGCTACTGCGTGGCCAGGCTTCACCCTCCTATCCACCCGAACCACC TCCAACGAGTGCTCAATCATTCATGGGAGCGTGGCCTTCGGGAGGTTCCT TGGTGGTTGCCGTTTTCCGAGTTGTCGATAACTTCTCTCGACAAGCAGCC TGGTCCTACTGTAATATTTTCCAAACGAGTTTCCTACGTAAGGTCGTCGA CGCTACGTACCAAGTATCACATGCCATCGGTCGGTGAAATTGCATGGCTC AGATCTGTTAATTCACTTGTGCTTGTACATATGTACTAATACATAACGTG TTTGTACATATGTACTAATACATAACGTGTTTGTGTACAGAGTGCCGTGT GCAGCAGTCTTCGGTGTCTACAACCATTGGAACCGGCGCACTAACCCGTG ATTTTCAGGTGGCCTTTTCTTACCTTGCGATCTTTCCGCGCACGCACGGT CGTGTGCTCTCGCCCGATTCAACGTCTCGCGCAGGCTGCTGCTGACGGTA CTTGGGCGGAAATATTCCACCCTTGTACTGGGCTTCTCACGTACCTTCGC TACGCTTAGCCGCATCCTTGCTGTCGCGTTGCGTTAGGAGCTTGACTCCC CGGACTCGCACGTTTTCTTTGTTTTTGGGGGTCCCTTGAGTGACAGGCGC CGACATGCTGTGCGTTATTTTTCTCCGCGCTTGGTTCTCTTGTTGCCGGT ACTGACCTGGGTAGATTCTGGTTTTAACGACGTGTGCTTGCCGTGCGCCG GCGCGTGTTCTCGTTTTTTTTGTTGGCGGTTTTGTCAGAACCGGCTCCAG CTCTCCAAGGGAGAGAACGACACCATGTGGTACAAGCTGGTGCAGGAAGA GAAGGCCAAGAAGCTCATGGGGCTCACGTGAGTCGTGATGCTGCTACTGC TGTCACCAGAAACTTATGGTATCATCATTCGAAGTGGGGCATATTCCCGA TTTCTTTTCCCCGTTTTATTATACGAGAATGTGCATGCCATCGAGAAAGA GCAAAACGCGCACACACGCACCAGGATGCGTTTTCGGTTTCGTTTCTTGT GGGATCGTGTTGCCATTGGTCAGTCGTTTAGCACGGTCTGCTGCGCTTGT GAAAATCTCAGCCCGCGCCCCCCCCCGGCACGGAAGCATTGAGTTCGGTT TTCGCCCTTCCGCCTCAGACTGTTTCGTATTTCTCAGGTCAGCACGACAA ATCCAACTATTAGTAGGAAAAATGACCACCCTGTGGGTCTGTCTGCTGCA TTTATTTTTTCGCCTCGCTCGTGGCGGCAGGCCTGAGCAGATGATGATCT ACCAGGTGATCGAGAAGGCCGGGAACAAAGGAATCTGGACGCGGGACATC AAGACGGCCACGAACGTGAACCAGAACACCATGACGAAGACGCTCAAGTC GCTGGAGGGGAGGCACCTCGTCAAGACGGCAAAGTCCGTCACGAGCAAGA GCAAGAAACTCTACATGCTCTACGAGCTCAGTGAGTTACAAGTCGGGGGA CGTACTTTCGTATTTCTTTGTGTTTTTATGTAGTGTTTGCACCAGCACGT ACTGTAAGCGTGAGGGACGGACGCACTGCGCTTTTTTTTTTGCGTTTTGG TGTTTTTTGGTGCACCAGAACGTACTTGTAGTGCAGCGCTCACGTGTCTG TGTGTCGCATCGGCGCCACCGCGAGCGGCACCGGCAGCAACAGTGGTACC ATGGTGTTATAGTGCTGTCGGCGGTGGCGGTGGGCGGTGGTACTGGTGGG AGGGCCCGTCGTGCTAGTCCCGATTGTGTACGGTGCGTGGTGTCCACGTC CGCGAAGAATAAGGGCCAAGAGAGGAGCTGCTCATGCTCTCCACACGGCG AGAGACAGGGCACGTGGTGGAGACCGAGTCGCCAGCTACAGCGAATAACG ATAGCGGCATTTTGGTTTGTTCGTCTCTCAGGGAGGGGCAGCACTGTCAT CGACAAGTACCACCTACAGTAGTTGCTGCCACCGTCTGAAACGTACGGTC ATTGCACGTCGCGACTATTTTTGATCCGGTGAAGGAGAAGCAACTGGTAC GTCTCGGCCTTGATCGCCACCTCACTCACTGGTAGATACGTGATACCCGC TTGAACGAGGTTCTTCTTTTTGCGCCCCTCTGTCGGTGCTTTCTGCCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CCCCCTCTCTCCCCCTCTCTCCCTCTCTCTCTCTCTCTCTGTCTCTCTCT GTCTCTCGCCTTTTTTGTTTTTCACGTTCCCATCTTACTCGTCACCACGA CCTATTTCATGGGACATCATCTTCAACAACGCCGAAAAACAACGGCGACG ACAACGACAAACAACGATCGAACGCAGCCCCGGCGAAGGAGATAACGGGA GGCCCCTGGTACACCGACCAAGAATTCGACTACGAGTTCGTCAAGCACCT CTCCACCTACGTGCTCAGCTACGTCAAAGAACAGGTAATAGCTTTGTTGT ACGCGCATAGAGAGTCTCTCTTTTTTGCGCGCGCTCTACGGAGCCGAGGC CGTTTGTTTTGCTTGTCTAGATTCTTGCTTGTGCACCACGAGGGGGGGGA GTGGCGTAGCTCGTTGTTACCATGTACATAAAAGCGCCAAGGACAGAGGG TTATTAATCGTTTGCCGTGTTGTCATACCTTCAAAACTACGGCGACATTG GTGTAACGTACACCGCGCTCTCCCTCTCTCTTGGCTGCCGCTGCTGCTGC TGCTGCTATTGCTGTGGTGCGGTGTCTACCGTTGCCTGCTGTGCATCGCT CACGTGTGCTTCCGCCGATTCACACGGTCTGTCGCGGCACCTCACGGCCG TATGCTGCCGTGTCGTCCTCCCGTGTTTTCTTGCATGCGCCTATTTCTTT GTAAGCACAGCAGTTGTGTCTTTGAAAAGCAGTTCCGCCGGCGACACCAC GCCCACTCCCCCCGATTCCTCGCCTCCGTCGTTTTCTTTCTTTCTGTCGG TAACCATGACAACTGGGGAAAACCTGCGACACCAAAACCTACGGCTAATC GAATTGTCGCGGCATCGAACACCTTGACGACAACCACGTTGTCGGCAACA CCAACACCAACAACGCCAACGCCAACGCCAACGCCAACGCCAATGACGAC GACTACTTGACAACAACCACATTGTCGGCAACACCGAAAACAACACCAAC GACGACAACGACAACGACAACGAAATCGACGAAACCGACAACGCCACAGG AAACGCCTCCGTTGAAAGACATCGCGGCGGCCATCAAGGTGTCGGGCATC TCCAAGATCGATCTCTCCATGGAGGAGGTGAAGCTGATCGTGAGCACCCT GGTGTACGACGGTCTCCTGGAGGAGGTCCGAGGAGCCGCGTCCAGGTTCA ACAGAGACGTGAGAAGAGTTGCCCTACGCCGCTAGCCGTGACACAGCAGT CACCGTTTAAGACTTGAATGCAGTACTTCGATCGGGGCAGTATGTGCCTC GAACGGGCAATGTTTCTGTGCTTGCATTGCAGTATAAAATTTTGTAGTGA AACGAACTTCTCACGCCTAATACGTACGTGAGGCTTTTTCACCCACCAGA ACGCAATCCTACAGGCGACCATCACAAACCTGTTTCGCTTTCTTTTCTTT TTTTTTTGGGGGGGGGGGTTTGGGGGGGGAGACATTCGGTCACAGATCAG GAATGCATTTATCATGTGAGCGCACACGCCTTGCCCCTCTTTCTCTCTTG CTTCTGCTTCATACACACCGGTGTGCGTATCGGCGGGGGGGGGAGAAGGC AGGAGATGGTCCCGTGTACAAGATGGCGCCGGCGGTGGAGGTCGTGAATG CTTTTACGGAGGTGCCGTGCGGGACGTGCAAGGTGAGCGAGGAGAAGGAT GGGTTGCTCGAAGCAGGAGAAGAAAGAGGGGGGCACGCAAGCGGGAAGGA ACGGACGACTCGCGTATGCTCTATGATGCCGAAGCGGTAGCAATGTGGGA GATGAGAAGGAACCAAAAACTTACTATTCAATTGTTAATTATCGTAGACA TTGCAAGGCGCACCTCCGGAGTGGGCTCATGAGAGCTTATAGTAGTAGTG CCGTCAAGGCGTGATGCAAGGTGAAAGTAAAGCACGTGGTGGTGTGAATC TGCTGCCAGCTGCCATCACTGACGTTTCCCAAAGCTCGAACAAGCTCATA CAAGAGCTGCCGTGTCTTCAACTAGAAAGAGCCCAGCGAACCTCAAGGAA CCAACAAGAGAGTTTTGCAAATTTGTACCATACAGTGTTGTTGTAGACTT GCCAGGATTGGCAATGGACCCATAACCATCAGGACCCCCGATCCCACCCC CGCGCTACAATTCAGGTGATGAAGCACTGCTCCGAGGACGGCGTGGTGTC GCCCAAGACTTGCGTGTACCTGGCGGAGTGGCTCAACCTGCCCAACTCGG ACGAGTTATTTTGACGCCACCGACCGACCTACCGGACTACACCGGTGATC GGGGCGGCGAAAAAGGAAAAAAGAGCCACCCCGAGTTCCGATTACCAAAA TAATTTTCCATCGAGACGAAGCTAGCTTTCAAGTATCGTAGCTGTGCGTG CGGTGAACCTCGTTCCTTGCCGCGTGGAATAATTTGCGCTGAACTACGTA AGAGTGTGTTGACGTAAACATTGTTTTTGTTGTGCTGATTGTTCGAACGA AAGCGGAATTTTTTGCCGTGAAAGAGAACACGTTTTTTTGGTCTGTATGT ATCAAGTGTAGGCTGTCAGCTGGTTATACTTCCGGGGGTCATGCGGGAGC TTTAAGCGCGAGTCCTTTATTTTGTGTGTGTGGGGGGGGAGGGGCGTGTG CGTGTGAGTCTTGGTGTGAAACGCCAAATAATGAGTTGTTCTCTACCATG TTTACGTCCGTGCTGTTTTTGTGTCTACCCGTCTTCCGTGCGCCGCCCAA GACTTTTATCATCTCCTGGGAGGCAACAACGCTGAAAGCTTGATTTTTTA GCACGGAGGAAGAAGAGTTTGTGTCTTGAGGGCATGGAGGCGTGTTTTCA ACTAGTCGGTTTGTTCGCCGTGTCGTGTGTATGTGTTTTTTTTTTCTCTT TATTAGCATCGAACGCGCTGAGCCGCGGGTGTGGTGTCTGTCTCAGCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1113:23708..30355+

>mRNA_E-siliculosus-1a_F_contig1113.765.1 ID=mRNA_E-siliculosus-1a_F_contig1113.765.1|Name=mRNA_E-siliculosus-1a_F_contig1113.765.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1806bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1113:23708..30355+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACCAGCCTCAGCCAGGAAAAATTTGCCAGCCTTCATGGCCGCCTCAT
GACCATCCTGTCCGCGGACTCGAGCATGACCAGCCTCAGCCAGGAAAAAT
TTGCCAGCCTTCATGGCCGCCTCATGACCATCCTGTCCGCGGACTCGAGC
GACGATGGGGTCAACAGCGAGGTTTTGTCGGAGAGCTTCGGCGAGGAGTA
CCCCCTGCTGGTGGACGTCATCAACTCCCTCCTCGTCGATGACGATGGGG
TCAACAGCGAGGTTTTGTCGGAGAGCTTCGGCGAGGAGTACCCCCTGCTG
GTGGACGTCATCAACTCCCTCCTCGTCGATAACCGGCTCCAGCTCTCCAA
GGGAGAGAACGACACCATGTGGTACAAGCTGGTGCAGGAAGAGAAGGCCA
AGAAGCTCATGGGGCTCACAACCGGCTCCAGCTCTCCAAGGGAGAGAACG
ACACCATGTGGTACAAGCTGGTGCAGGAAGAGAAGGCCAAGAAGCTCATG
GGGCTCACGCCTGAGCAGATGATGATCTACCAGGTGATCGAGAAGGCCGG
GAACAAAGGAATCTGGACGCGGGACATCAAGACGGCCACGAACGTGAACC
AGAACACCATGACGAAGACGCTCAAGTCGCTGGAGGGGAGGCACCTCGTC
AAGACGGCAAAGTCCGTCACGAGCAAGAGCAAGAAACTCTACATGCTCTA
CGAGCTCAGCCTGAGCAGATGATGATCTACCAGGTGATCGAGAAGGCCGG
GAACAAAGGAATCTGGACGCGGGACATCAAGACGGCCACGAACGTGAACC
AGAACACCATGACGAAGACGCTCAAGTCGCTGGAGGGGAGGCACCTCGTC
AAGACGGCAAAGTCCGTCACGAGCAAGAGCAAGAAACTCTACATGCTCTA
CGAGCTCACCCCGGCGAAGGAGATAACGGGAGGCCCCTGGTACACCGACC
AAGAATTCGACTACGAGTTCGTCAAGCACCTCTCCACCTACGTGCTCAGC
TACGTCAAAGAACAGCCCCGGCGAAGGAGATAACGGGAGGCCCCTGGTAC
ACCGACCAAGAATTCGACTACGAGTTCGTCAAGCACCTCTCCACCTACGT
GCTCAGCTACGTCAAAGAACAGGAAACGCCTCCGTTGAAAGACATCGCGG
CGGCCATCAAGGTGTCGGGCATCTCCAAGATCGATCTCTCCATGGAGGAG
GTGAAGCTGATCGTGAGCACCCTGGTGTACGACGGTCTCCTGGAGGAGGT
CCGAGGAGCCGCGTCCAGGTTCAACAGAGACGAAACGCCTCCGTTGAAAG
ACATCGCGGCGGCCATCAAGGTGTCGGGCATCTCCAAGATCGATCTCTCC
ATGGAGGAGGTGAAGCTGATCGTGAGCACCCTGGTGTACGACGGTCTCCT
GGAGGAGGTCCGAGGAGCCGCGTCCAGGTTCAACAGAGACGCAGGAGATG
GTCCCGTGTACAAGATGGCGCCGGCGGTGGAGGTCGTGAATGCTTTTACG
GAGGTGCCGTGCGGGACGTGCAAGGCAGGAGATGGTCCCGTGTACAAGAT
GGCGCCGGCGGTGGAGGTCGTGAATGCTTTTACGGAGGTGCCGTGCGGGA
CGTGCAAGGTGATGAAGCACTGCTCCGAGGACGGCGTGGTGTCGCCCAAG
ACTTGCGTGTACCTGGCGGAGTGGCTCAACCTGCCCAACTCGGACGAGTT
ATTTTGAGTGATGAAGCACTGCTCCGAGGACGGCGTGGTGTCGCCCAAGA
CTTGCGTGTACCTGGCGGAGTGGCTCAACCTGCCCAACTCGGACGAGTTA
TTTTGA
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