mRNA_E-fasciculatus_F_contig1.5.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1.5.1 vs. uniprot
Match: D8LQK9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK9_ECTSI) HSP 1 Score: 2081 bits (5392), Expect = 0.000e+0 Identity = 1177/1385 (84.98%), Postives = 1217/1385 (87.87%), Query Frame = 1
Query: 100 MAPTMHSSTTEMVERKVLEMAQHASFHQHVSYNLSTILHAFTAGKTDPTEIAQAFSRARGLEVITRVISGEPMAKPSVLSLCCRTAIWVVDKFGSGVSHSQGGGLVEALVGRLDRGVSGDDAQTVECQVECARLMSSVAGQAASLLIDGGALGAIEGMLEQLGGKHSSIMRPCCEALERVSRTEEGRATFEERGTGGVLLATIRDFPEALEEGSDVALASALKVVERIFTGKSPEACALSLRAKSEEESCDDPHRPTFSDYDNCVETVLAVVEATPEAPGAAAATCLWWLSGASSKAPDRALAAILAAAAVANGTEATHEARAAEKAAAQLLVSADVWSWFSRGDGGEGNAEEEGENIPPARPVEGARFLAALCLCRPGLECLEAAVERETPRRVAEALVTLCGSADPLLARACFRIIERLAKGGTGPQVFVDAGALAAAAEAGALFEVEEDAETVEDAEAHAIAAALGAVATLAEAGGKDARPVVDNAFQLSVRCLARVGEYSGRPAAAAAKSALDVITVRLTRSDRPKGAVGVRGGGAAAGPAPVAEGAVVENDEGDGGTDKAVSGPR-----EDAADVEDVDKPMEILKDAGAILAVMKAHSTDARVQQSGWKSLIAMDTGRGDVEKFWTGVGDGQQSRRQMLRDCLERHGGDSLVAGQVADILEGLVLQGDS-DGDGSSLTASLSDAPGDESPRLPTYHEEPEGGDVDDASEHLKSGGGDEAPPDKSGPLEEDQNAAEESS-QDNIQPPTEAAHPKEVEQVVD-VDEDKDGDLEVDRDEGDVPEDKGAEVGGGDEANHVSEASEGAENTDGGSDPLGDAEGKSETLLPEDVLMEIGLMGTKTVEGGSSTGSSDSSRTAPVAAAVAEDATTGEGSTSRPNVARSLFGSNGHANDENGAAVDTAEAEKPGAKTDCSLNASAVVPSKEELQLRRSWAKLEKLHGDIVGRSQILGGESAQMVAAMPEPSVLKERVGTLLEETESGDSRDAFAAASLTLVGALTAATGALNNSQKEVQRYLAMSRDLRVTSTWTDISEAMQWTMDSLKGTVILFTPHTAGGLTKALGLCKNMDSALKLFKEAALQIKIIVVELAGEHEPNTVWRVSPSLFKGLPENRKVMTLRHLRSLVVAYDHLSDEMRRDLTTALEIIKNREILNMMGKYCILAEAAEEKRREAKLASAEERLKVGRRPS------------------------GTRQSITPGRRSPPMGIRASFSESSPPSLARGAHGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRASPPLGSGSRKAPLSTPRSGRSSPTPAGGIGSSRIPRGVASHSRRRDSVASGAAGAEAGSSAMGDRRARSP----RPSSGRSKSPVASRMGGTRRVSRSLTPK 4146
MAPTM SSTTEMVERKVLEMAQHASFHQHVSYNLSTILHAF+AGKTDPTEIAQAFSRARGLEVITRVISGEPMAKPSVLSLCCRTA+WVVDKFGSGVSHSQGGGLVEALVGRLDRGVSGDDAQTVECQVECARLMSS+AGQAASLLIDGGALGAIE MLEQLGG HSSIMRPCCEALERVSRTEEGRATFEERGTGGVLLATIRDFPEALEEGSDVALASALKVVERIFTGKSPEACALSLRAKSEEESCDDPHRPTFSDYDNCVETVL VVEATPEAPGAAAATCLWWLSGASSKAPDRAL+AILAAAAVA+GTEAT+EAR AEKAAAQLLVSADVWSWFSRGDGGEG+ +EEGEN+PPARPVEGARFLAALCLCRPGLECLEAAVERE+PRRVAEALVTLC SADPLLARACFRIIERLAKGGTGPQVFVDAGALAAAA AGALFEVEEDAETVEDAEAHAIAAALGAVATLA+AGGKDARPVVD+AFQLSVRCLARVGEYSGRPAAAAAKSALDVITVRLTR DRPKGA GVRGGGAAAGPAP A GAVVENDEG G TDKAVSG EDAA EDVD PMEILKDAGAILAVMKAHSTDARVQQSGW+SLIAMDTGRGDVEKFWTGVGDG QSRRQMLRDCLERHGGDSLVAGQVADILEGLVLQGDS DGDGSSLTASLSDAPG+ESPRLP+ HEE EGGD DDA QDNI+ T+AAH +EVEQVV+ DEDKDG LEV D+GDVPEDKGAEV GGDEA V+EASEGA N DGGSDPLGDAEGKSETLLPEDVL+EIGL+GTKT+EGG S+GSSDSSRTA V AAVAEDA TGEGST+RPNVARSLFGSNGHAND+N AA DT EAEKP AK DCSLNAS VVPSKEEL+LRRSWAKLE LH DIVGRSQILGGESA MVAAM EPSVLKERV LLEETESGDSRDAFAAASL LVGALTAATGALNNSQKEVQRYLAMSRDLRVTSTWTDISEAMQWTMDSLKGTVILFTPHTAGGLTKALGLCKNMDSALKLFKEAALQIKIIVVELAGEHEPNTVWRV+ SLFKGLPENRKVMTLRHLRSLVVAYDHLSDEMRRDLTTALEIIKNRE+LNMMGKYCI AEAAEEKR EAKLA+A+ERLKVGRRPS GTRQSITPGRRSPPMGIRASFSE SPPSLARG GTP GRASPPLGSGSRKAPL TPRSGRS+ TP GG+G S IPRGVASHSRRR+S A AEAGSSAM DRR+RSP RP+ GRSKSPV +R+ GTRRVSRSLTP+
Sbjct: 1 MAPTMQSSTTEMVERKVLEMAQHASFHQHVSYNLSTILHAFSAGKTDPTEIAQAFSRARGLEVITRVISGEPMAKPSVLSLCCRTAVWVVDKFGSGVSHSQGGGLVEALVGRLDRGVSGDDAQTVECQVECARLMSSLAGQAASLLIDGGALGAIECMLEQLGGNHSSIMRPCCEALERVSRTEEGRATFEERGTGGVLLATIRDFPEALEEGSDVALASALKVVERIFTGKSPEACALSLRAKSEEESCDDPHRPTFSDYDNCVETVLTVVEATPEAPGAAAATCLWWLSGASSKAPDRALSAILAAAAVADGTEATNEAREAEKAAAQLLVSADVWSWFSRGDGGEGDVQEEGENVPPARPVEGARFLAALCLCRPGLECLEAAVERESPRRVAEALVTLCESADPLLARACFRIIERLAKGGTGPQVFVDAGALAAAAVAGALFEVEEDAETVEDAEAHAIAAALGAVATLADAGGKDARPVVDDAFQLSVRCLARVGEYSGRPAAAAAKSALDVITVRLTRPDRPKGAAGVRGGGAAAGPAPEAGGAVVENDEGGGDTDKAVSGAPGDAKVEDAA--EDVDTPMEILKDAGAILAVMKAHSTDARVQQSGWRSLIAMDTGRGDVEKFWTGVGDGPQSRRQMLRDCLERHGGDSLVAGQVADILEGLVLQGDSADGDGSSLTASLSDAPGEESPRLPSDHEEAEGGDEDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDNIKHSTDAAHQQEVEQVVNGEDEDKDGGLEVPGDKGDVPEDKGAEVEGGDEATAVAEASEGAGNADGGSDPLGDAEGKSETLLPEDVLIEIGLIGTKTLEGGGSSGSSDSSRTASVVAAVAEDAVTGEGSTTRPNVARSLFGSNGHANDKNSAAGDTVEAEKPEAKADCSLNASVVVPSKEELKLRRSWAKLETLHSDIVGRSQILGGESAPMVAAMAEPSVLKERVSALLEETESGDSRDAFAAASLALVGALTAATGALNNSQKEVQRYLAMSRDLRVTSTWTDISEAMQWTMDSLKGTVILFTPHTAGGLTKALGLCKNMDSALKLFKEAALQIKIIVVELAGEHEPNTVWRVNQSLFKGLPENRKVMTLRHLRSLVVAYDHLSDEMRRDLTTALEIIKNREVLNMMGKYCIQAEAAEEKRWEAKLATADERLKVGRRPSDMLGSSVRKARLRSALHQASCLGNGTRQSITPGRRSPPMGIRASFSEPSPPSLARGGLGTPTTTTPVRSNGAAESPGSGGSNGGNNVG-GRASPPLGSGSRKAPLITPRSGRSTATPPGGVGGSGIPRGVASHSRRRESFA---VEAEAGSSAMEDRRSRSPMFKRRPAGGRSKSPVTARVRGTRRVSRSLTPR 1379
BLAST of mRNA_E-fasciculatus_F_contig1.5.1 vs. uniprot
Match: F0XY39_AURAN (Calponin-homology (CH) domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY39_AURAN) HSP 1 Score: 67.4 bits (163), Expect = 3.330e-7 Identity = 62/240 (25.83%), Postives = 110/240 (45.83%), Query Frame = 1
Query: 2941 GESAQMVAAMPEPSVLKERVGTLLEETESGDSRDAFAAASLTLVGALTAATGALNNSQKEVQRYLAMSRDLRVTSTWTDISEAMQWTMDSLKGTVILFTPHTAGGLTKALGLCKNMDSALKLFKEAALQIKIIVVELAGEHEPN-TVWRV--SPSLFKGLPENRKVMTLRHLRSLVVAYDHLSDEMRRDLTTALEIIKNREILNMMGKYCILAEAAEEKRREAKLASAEERLKVGRRPSG 3651
GE+ +++ + E ++ K R L E E+ + L A +AA L + + Y A + A++ TM+ LKG + + L KAL + + KLFK A L++K +VV + ++ + W + F + + + L HLR+L VAYD+++ + +R+LTT E++ N + L + K+C+ ++ RE +L E R +V R G
Sbjct: 366 GEALRLMQSQAEEAIAKSRDDALAEAAEAPPPQSP----GLPDEHASSAALAKLAEASEGTVAYSAAA------------FAALKTTMEYLKGHAVSLHRRESSKLLKALDRADDGVARAKLFKHAHLKVKEVVVRVTRSNQRSGRHWEPFHGDASFATVQPHELALILTHLRNLAVAYDNMTADEKRELTTVRELVVNLDWLCALAKHCVASDERRYADRERRL-DREPRARVDRAGDG 588 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1.5.1 >prot_E-fasciculatus_F_contig1.5.1 ID=prot_E-fasciculatus_F_contig1.5.1|Name=mRNA_E-fasciculatus_F_contig1.5.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1355bp MAPTMHSSTTEMVERKVLEMAQHASFHQHVSYNLSTILHAFTAGKTDPTEback to top mRNA from alignment at E-fasciculatus_F_contig1:80032..96692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1.5.1 ID=mRNA_E-fasciculatus_F_contig1.5.1|Name=mRNA_E-fasciculatus_F_contig1.5.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=16661bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1:80032..96692+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1:80032..96692+ >mRNA_E-fasciculatus_F_contig1.5.1 ID=mRNA_E-fasciculatus_F_contig1.5.1|Name=mRNA_E-fasciculatus_F_contig1.5.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8130bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1:80032..96692+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |